Difference between revisions of "NONHSAT011521"
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sequence = <dnaseq>ATTGAGTTCAAAGCAGTGATGTTTGGATCAGGCAGTAGATGAGGTTAAGGGTTCCTGTGGTGGTTTATTTGGTGAGACTGGGCATGATTCAGAAAAGTTGGAAGATCTAGAGAGGGATCTTGCAATCTGAAGTTTCTTGTTTAGTCACTGGAGGACCACCGCCTACTTTAAGAGAACACAGACAATTCACCTCTATAAAGGCACAGCCAGGAAAAGGAGTAGGCAGAGGTGACAGCAGATCATGGGGCTTCTCTTGAAAGGAAGACACCTCCCAGTGATGAACCCTCATCATCCATTTACTGACATATCCTTATGTCACCAGGATCTGAACGTCTATGACACTCTTTCGAGCTGACACAGTGAAGAACATAGAAGGAGAACTCACCCAGTCTGCCAGGGTCACAGAATGATCATACTCAAGATCTTCCTGGGGAGTCAATGGCAAATTTCACTGGGCTATTTTACAGATGAAGAAGGAACATAAAGAAGGTTCTGGGACCCCGAA</dnaseq>| | sequence = <dnaseq>ATTGAGTTCAAAGCAGTGATGTTTGGATCAGGCAGTAGATGAGGTTAAGGGTTCCTGTGGTGGTTTATTTGGTGAGACTGGGCATGATTCAGAAAAGTTGGAAGATCTAGAGAGGGATCTTGCAATCTGAAGTTTCTTGTTTAGTCACTGGAGGACCACCGCCTACTTTAAGAGAACACAGACAATTCACCTCTATAAAGGCACAGCCAGGAAAAGGAGTAGGCAGAGGTGACAGCAGATCATGGGGCTTCTCTTGAAAGGAAGACACCTCCCAGTGATGAACCCTCATCATCCATTTACTGACATATCCTTATGTCACCAGGATCTGAACGTCTATGACACTCTTTCGAGCTGACACAGTGAAGAACATAGAAGGAGAACTCACCCAGTCTGCCAGGGTCACAGAATGATCATACTCAAGATCTTCCTGGGGAGTCAATGGCAAATTTCACTGGGCTATTTTACAGATGAAGAAGGAACATAAAGAAGGTTCTGGGACCCCGAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Antisense]][[Category:NONHSAG005273]] | + | [[Category:Antisense]][[Category:NONHSAG005273]][[Category:Transcripts]] |
Latest revision as of 20:03, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT011521 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
antisense |
| Length |
505 nt |
| Genomic location |
chr10+:13691264..13697485 |
| Exon number |
4 |
| Exons |
13691264..13691334,13694408..13694489,13696184..13696427,13697378..13697485 |
| Genome context |
|
| Sequence |
000001 ATTGAGTTCA AAGCAGTGAT GTTTGGATCA GGCAGTAGAT GAGGTTAAGG GTTCCTGTGG TGGTTTATTT GGTGAGACTG 000080
000081 GGCATGATTC AGAAAAGTTG GAAGATCTAG AGAGGGATCT TGCAATCTGA AGTTTCTTGT TTAGTCACTG GAGGACCACC 000160 000161 GCCTACTTTA AGAGAACACA GACAATTCAC CTCTATAAAG GCACAGCCAG GAAAAGGAGT AGGCAGAGGT GACAGCAGAT 000240 000241 CATGGGGCTT CTCTTGAAAG GAAGACACCT CCCAGTGATG AACCCTCATC ATCCATTTAC TGACATATCC TTATGTCACC 000320 000321 AGGATCTGAA CGTCTATGAC ACTCTTTCGA GCTGACACAG TGAAGAACAT AGAAGGAGAA CTCACCCAGT CTGCCAGGGT 000400 000401 CACAGAATGA TCATACTCAA GATCTTCCTG GGGAGTCAAT GGCAAATTTC ACTGGGCTAT TTTACAGATG AAGAAGGAAC 000480 000481 ATAAAGAAGG TTCTGGGACC CCGAA |
Predicted Small Protein
| Name | NONHSAT011521_smProtein_335:409 |
| Length | 25 |
| Molecular weight | 2710.0248 |
| Aromaticity | 0.0416666666667 |
| Instability index | 50.5125 |
| Isoelectric point | 5.05877685547 |
| Runs | 5 |
| Runs residual | 0.0267857142857 |
| Runs probability | 0.0490902667374 |
| Amino acid sequence | MTLFRADTVKNIEGELTQSARVTE |
| Secondary structure | LEEEEELLHHHHHHHHLLLLLLLL |
| PRMN | - |
| PiMo | - |
