Difference between revisions of "NONHSAT015866"
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sequence = <dnaseq>CCCCAGCCCGCCGCCATGGCCGCCTACAAACTGGTGCTGATCCGGCACGGCGAGAGCGCATGGAACCTGGAGAACCGCTTCAGCGGCTGGTACGACGCCGACCTGAGCCCGGCGGGCCACGAGGAGGCGAAGCGCGGCGGGCAGGCGCTACGAGGTCTTTTTCAGGTTCCCTTAGCGCCAGAAGCGGTTGGTACAGTCTGGTGCTCCTGGAGGACGCCCTGTGCCTTAAAGCAGCTGTAACCAAGGCCTCTCAAGAGGCGGCTACGGATCCTAGCGGATCGACACGCCACACAGCCTCGTCCCCAGCAGTAGGTGGAGGCCCTGGGGGTGCCTAACAAGCCTCAGAACACCAAGAAATCCGCGTGGTTGTGCAGGTCTTTGCTGTTCAGTAGCATTCCACAAATAGTGTGTCCAAAACGCATCTGTAGATGTAACTTGAGTGAATGAATGAATGATTCGAGTTGCTCCTTCTACCCAATAAAGTAGATAAGATTTTA</dnaseq>| | sequence = <dnaseq>CCCCAGCCCGCCGCCATGGCCGCCTACAAACTGGTGCTGATCCGGCACGGCGAGAGCGCATGGAACCTGGAGAACCGCTTCAGCGGCTGGTACGACGCCGACCTGAGCCCGGCGGGCCACGAGGAGGCGAAGCGCGGCGGGCAGGCGCTACGAGGTCTTTTTCAGGTTCCCTTAGCGCCAGAAGCGGTTGGTACAGTCTGGTGCTCCTGGAGGACGCCCTGTGCCTTAAAGCAGCTGTAACCAAGGCCTCTCAAGAGGCGGCTACGGATCCTAGCGGATCGACACGCCACACAGCCTCGTCCCCAGCAGTAGGTGGAGGCCCTGGGGGTGCCTAACAAGCCTCAGAACACCAAGAAATCCGCGTGGTTGTGCAGGTCTTTGCTGTTCAGTAGCATTCCACAAATAGTGTGTCCAAAACGCATCTGTAGATGTAACTTGAGTGAATGAATGAATGATTCGAGTTGCTCCTTCTACCCAATAAAGTAGATAAGATTTTA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG006634]] | + | [[Category:Sense]][[Category:NONHSAG006634]][[Category:Transcripts]] |
Latest revision as of 20:16, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT015866 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
497 nt |
| Genomic location |
chr10+:99186050..99187200 |
| Exon number |
2 |
| Exons |
99186050..99186203,99186858..99187200 |
| Genome context |
|
| Sequence |
000001 CCCCAGCCCG CCGCCATGGC CGCCTACAAA CTGGTGCTGA TCCGGCACGG CGAGAGCGCA TGGAACCTGG AGAACCGCTT 000080
000081 CAGCGGCTGG TACGACGCCG ACCTGAGCCC GGCGGGCCAC GAGGAGGCGA AGCGCGGCGG GCAGGCGCTA CGAGGTCTTT 000160 000161 TTCAGGTTCC CTTAGCGCCA GAAGCGGTTG GTACAGTCTG GTGCTCCTGG AGGACGCCCT GTGCCTTAAA GCAGCTGTAA 000240 000241 CCAAGGCCTC TCAAGAGGCG GCTACGGATC CTAGCGGATC GACACGCCAC ACAGCCTCGT CCCCAGCAGT AGGTGGAGGC 000320 000321 CCTGGGGGTG CCTAACAAGC CTCAGAACAC CAAGAAATCC GCGTGGTTGT GCAGGTCTTT GCTGTTCAGT AGCATTCCAC 000400 000401 AAATAGTGTG TCCAAAACGC ATCTGTAGAT GTAACTTGAG TGAATGAATG AATGATTCGA GTTGCTCCTT CTACCCAATA 000480 000481 AAGTAGATAA GATTTTA |
Predicted Small Protein
| Name | NONHSAT015866_smProtein_59:334 |
| Length | 92 |
| Molecular weight | 9230.1763 |
| Aromaticity | 0.032967032967 |
| Instability index | 73.3736263736 |
| Isoelectric point | 10.2305297852 |
| Runs | 12 |
| Runs residual | 0.00160256410256 |
| Runs probability | 0.0446843902727 |
| Amino acid sequence | MEPGEPLQRLVRRRPEPGGPRGGEARRAGATRSFSGSLSARSGWYSLVLLEDALCLKAAV TKASQEAATDPSGSTRHTASSPAVGGGPGGA |
| Secondary structure | LLLLLHHHHHHHLLLLLLLLLLHHHHLLLLEEEELLEELLLLLEEEEHHHHHHHHHHHHH HHHHHHHLLLLLLLLLLLLLLLLLLLLLLLL |
| PRMN | - |
| PiMo | - |
