Difference between revisions of "NONHSAT021792"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>CCATGGTTGCACGATTAGGTAGGGGCTCCGGGCGCTTTGCCCACCCCCGAGCTGGAGGGGACTGGCGGGAAGCGGCGGTTGGCTGCAGGGCGCTCCGCCGGGCGTGGGGTGTAGCCGTGTCGGTGAGCGAGCTCTGCTCGAGGCGGAGAGGAGAAACTCGGGAAGCAATTGTGGCTACTCTAAGGCTACTGGTTTCGAGTCAGGCCGTGCGACCTTAGGCAAGTCGCACATTCTCTCCGTGCAGCTGCCTAGCAGTGTGGATTCAGTATCACCGTGTGTGTAAAGCTCTTTCTAAGAATCGTAAGGAACCACCAGCTGCTGCATCCCATGGCCAGGGGTGGCGTCCAGGTGGCAGAGCAGCTAGGAACGCAAGGCCTGAACCTGGGGCCAGACACCCTGCTCTCCCGGCCATGGTCAACGACCCTCCAGTACCTGCCTTACTGTGGGCCCAGGAGGACCGACTGTGATTCCTCCACCACCTCACTCTGCTCCTTCCCTGTTGCCAATGTCTCGCTGACTAAGGGTGGACGTGATCGGGTGCTGATGTATGGACAGCCGTATCGTGTTACCTTAGAGCTTGAGCTGCCAGAGTCCCCTGTGAATCAAGATTTGGGCATGTTCTTGGTCACCATTTCCTGCTACACCAGAGGTGGCCGAATCATCTCCACTTCTTCGCGTTCGGTAAGTGTTG</dnaseq>| | sequence = <dnaseq>CCATGGTTGCACGATTAGGTAGGGGCTCCGGGCGCTTTGCCCACCCCCGAGCTGGAGGGGACTGGCGGGAAGCGGCGGTTGGCTGCAGGGCGCTCCGCCGGGCGTGGGGTGTAGCCGTGTCGGTGAGCGAGCTCTGCTCGAGGCGGAGAGGAGAAACTCGGGAAGCAATTGTGGCTACTCTAAGGCTACTGGTTTCGAGTCAGGCCGTGCGACCTTAGGCAAGTCGCACATTCTCTCCGTGCAGCTGCCTAGCAGTGTGGATTCAGTATCACCGTGTGTGTAAAGCTCTTTCTAAGAATCGTAAGGAACCACCAGCTGCTGCATCCCATGGCCAGGGGTGGCGTCCAGGTGGCAGAGCAGCTAGGAACGCAAGGCCTGAACCTGGGGCCAGACACCCTGCTCTCCCGGCCATGGTCAACGACCCTCCAGTACCTGCCTTACTGTGGGCCCAGGAGGACCGACTGTGATTCCTCCACCACCTCACTCTGCTCCTTCCCTGTTGCCAATGTCTCGCTGACTAAGGGTGGACGTGATCGGGTGCTGATGTATGGACAGCCGTATCGTGTTACCTTAGAGCTTGAGCTGCCAGAGTCCCCTGTGAATCAAGATTTGGGCATGTTCTTGGTCACCATTTCCTGCTACACCAGAGGTGGCCGAATCATCTCCACTTCTTCGCGTTCGGTAAGTGTTG</dnaseq>| | ||
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− | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG008535]][[Category:Transcripts]] |
Latest revision as of 20:34, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT021792 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
691 nt |
Genomic location |
chr11-:62462030..62473692 |
Exon number |
4 |
Exons |
62462030..62462183,62469940..62470021,62472940..62473089,62473388..62473692 |
Genome context |
|
Sequence |
000001 CCATGGTTGC ACGATTAGGT AGGGGCTCCG GGCGCTTTGC CCACCCCCGA GCTGGAGGGG ACTGGCGGGA AGCGGCGGTT 000080
000081 GGCTGCAGGG CGCTCCGCCG GGCGTGGGGT GTAGCCGTGT CGGTGAGCGA GCTCTGCTCG AGGCGGAGAG GAGAAACTCG 000160 000161 GGAAGCAATT GTGGCTACTC TAAGGCTACT GGTTTCGAGT CAGGCCGTGC GACCTTAGGC AAGTCGCACA TTCTCTCCGT 000240 000241 GCAGCTGCCT AGCAGTGTGG ATTCAGTATC ACCGTGTGTG TAAAGCTCTT TCTAAGAATC GTAAGGAACC ACCAGCTGCT 000320 000321 GCATCCCATG GCCAGGGGTG GCGTCCAGGT GGCAGAGCAG CTAGGAACGC AAGGCCTGAA CCTGGGGCCA GACACCCTGC 000400 000401 TCTCCCGGCC ATGGTCAACG ACCCTCCAGT ACCTGCCTTA CTGTGGGCCC AGGAGGACCG ACTGTGATTC CTCCACCACC 000480 000481 TCACTCTGCT CCTTCCCTGT TGCCAATGTC TCGCTGACTA AGGGTGGACG TGATCGGGTG CTGATGTATG GACAGCCGTA 000560 000561 TCGTGTTACC TTAGAGCTTG AGCTGCCAGA GTCCCCTGTG AATCAAGATT TGGGCATGTT CTTGGTCACC ATTTCCTGCT 000640 000641 ACACCAGAGG TGGCCGAATC ATCTCCACTT CTTCGCGTTC GGTAAGTGTT G |
Predicted Small Protein
Name | NONHSAT021792_smProtein_2:217 |
Length | 72 |
Molecular weight | 7700.8229 |
Aromaticity | 0.0422535211268 |
Instability index | 44.8197183099 |
Isoelectric point | 11.8754272461 |
Runs | 12 |
Runs residual | 0.0204595997035 |
Runs probability | 0.0468924807161 |
Amino acid sequence | MVARLGRGSGRFAHPRAGGDWREAAVGCRALRRAWGVAVSVSELCSRRRGETREAIVATL RLLVSSQAVRP |
Secondary structure | LEEEELLLLLEELLLLLLLLHHHHHHHHHHHHHHLLEEEEEHHHHLLLLLLHHHHHHHHH HHHHHHLLLLL |
PRMN | - |
PiMo | - |