Difference between revisions of "NONHSAT023402"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>AACTGCAGGGCCAGCTGGAGTATGAACGACTACGTAGAGAAAAATTAGAATGTCAGCTTGATGAATATCGAGCAGAAGTTGATCAACTCAGGGAAACACTGGAAAAAATTCAAGTCCCAAACTTTGTGGCTATGGAAGACAGCGCTTCTTGTGAGTCAAACAAAGAGAAGAGGCGAGTAAAAAAAAAGGTTTCTTCTGGAGGGGTGTTTGTGAGAAGatttacaattgggcaagtcactttacctagggcagagtggataaggggatgaagagtgacgacagtgttatgctactggagcttccttcacatggaggaaaGACGCATTCCCTCTTAATATTTTAGAATATTTTAAATCTTAACAAACCAATAatttacttgtttatgtctctctccttaagattgtcaattcaatgagaatgaaaccatgttcatctctgtgcacacagggactagcatgctgtttggcatatagcaggcagtcatattggttaactgaacaaatGCAGTATACTTTGTTACAGTGGACTTTAATATATATGGTAACTTATTAATTGACTCAGTGAAAATTAATCTATAATATACTAAGAACTCTCTTAGGCAATAGAGATAAAAATGAATCAGAATGTAACAGGATAATGTCAAGGTTTTTCTTTTGAAAACAAACCAGCAGTTAGATTTTTGAGGAAAATATAGTTGGAAAGCCTGACTCTCACTCACTGGACCATATGGACCAATCTCTTGACTGCTCTATACTGCAGATTCCCTGTTTATAGCTAAACAAATGACAAGGCTATTTTGAATAATGATTGTCAAACTTTTATAGCTATTACCAAGGCATTATGAACTCAAAATGT</dnaseq>| | sequence = <dnaseq>AACTGCAGGGCCAGCTGGAGTATGAACGACTACGTAGAGAAAAATTAGAATGTCAGCTTGATGAATATCGAGCAGAAGTTGATCAACTCAGGGAAACACTGGAAAAAATTCAAGTCCCAAACTTTGTGGCTATGGAAGACAGCGCTTCTTGTGAGTCAAACAAAGAGAAGAGGCGAGTAAAAAAAAAGGTTTCTTCTGGAGGGGTGTTTGTGAGAAGatttacaattgggcaagtcactttacctagggcagagtggataaggggatgaagagtgacgacagtgttatgctactggagcttccttcacatggaggaaaGACGCATTCCCTCTTAATATTTTAGAATATTTTAAATCTTAACAAACCAATAatttacttgtttatgtctctctccttaagattgtcaattcaatgagaatgaaaccatgttcatctctgtgcacacagggactagcatgctgtttggcatatagcaggcagtcatattggttaactgaacaaatGCAGTATACTTTGTTACAGTGGACTTTAATATATATGGTAACTTATTAATTGACTCAGTGAAAATTAATCTATAATATACTAAGAACTCTCTTAGGCAATAGAGATAAAAATGAATCAGAATGTAACAGGATAATGTCAAGGTTTTTCTTTTGAAAACAAACCAGCAGTTAGATTTTTGAGGAAAATATAGTTGGAAAGCCTGACTCTCACTCACTGGACCATATGGACCAATCTCTTGACTGCTCTATACTGCAGATTCCCTGTTTATAGCTAAACAAATGACAAGGCTATTTTGAATAATGATTGTCAAACTTTTATAGCTATTACCAAGGCATTATGAACTCAAAATGT</dnaseq>| | ||
}} | }} | ||
− | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG009232]][[Category:Transcripts]] |
Latest revision as of 20:41, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT023402 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
855 nt |
Genomic location |
chr11+:82958996..82971736 |
Exon number |
3 |
Exons |
82958996..82959129,82966887..82966969,82971099..82971736 |
Genome context |
|
Sequence |
000001 AACTGCAGGG CCAGCTGGAG TATGAACGAC TACGTAGAGA AAAATTAGAA TGTCAGCTTG ATGAATATCG AGCAGAAGTT 000080
000081 GATCAACTCA GGGAAACACT GGAAAAAATT CAAGTCCCAA ACTTTGTGGC TATGGAAGAC AGCGCTTCTT GTGAGTCAAA 000160 000161 CAAAGAGAAG AGGCGAGTAA AAAAAAAGGT TTCTTCTGGA GGGGTGTTTG TGAGAAGatt tacaattggg caagtcactt 000240 000241 tacctagggc agagtggata aggggatgaa gagtgacgac agtgttatgc tactggagct tccttcacat ggaggaaaGA 000320 000321 CGCATTCCCT CTTAATATTT TAGAATATTT TAAATCTTAA CAAACCAATA atttacttgt ttatgtctct ctccttaaga 000400 000401 ttgtcaattc aatgagaatg aaaccatgtt catctctgtg cacacaggga ctagcatgct gtttggcata tagcaggcag 000480 000481 tcatattggt taactgaaca aatGCAGTAT ACTTTGTTAC AGTGGACTTT AATATATATG GTAACTTATT AATTGACTCA 000560 000561 GTGAAAATTA ATCTATAATA TACTAAGAAC TCTCTTAGGC AATAGAGATA AAAATGAATC AGAATGTAAC AGGATAATGT 000640 000641 CAAGGTTTTT CTTTTGAAAA CAAACCAGCA GTTAGATTTT TGAGGAAAAT ATAGTTGGAA AGCCTGACTC TCACTCACTG 000720 000721 GACCATATGG ACCAATCTCT TGACTGCTCT ATACTGCAGA TTCCCTGTTT ATAGCTAAAC AAATGACAAG GCTATTTTGA 000800 000801 ATAATGATTG TCAAACTTTT ATAGCTATTA CCAAGGCATT ATGAACTCAA AATGT |
Predicted Small Protein
Name | NONHSAT023402_smProtein_131:268 |
Length | 46 |
Molecular weight | 5124.8609 |
Aromaticity | 0.0666666666667 |
Instability index | 66.1377777778 |
Isoelectric point | 10.5188598633 |
Runs | 8 |
Runs residual | 0.0155303030303 |
Runs probability | 0.029367602897 |
Amino acid sequence | MEDSASCESNKEKRRVKKKVSSGGVFVRRFTIGQVTLPRAEWIRG |
Secondary structure | LLLLLLLLLLHHHHEEEEEELLLLEEEEEEEEEEEELLLLEEEEL |
PRMN | - |
PiMo | - |