Difference between revisions of "NONHSAT025112"
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sequence = <dnaseq>AGATGCTTCTGGGTCGCGGTGTGCTAAGCGAGGAGTCCGAGTGTGTGAGCTTGAGAGCCGCGCGCTAGAGCGACCCGGCGAGGGATGGCGGCCACCGGGACCGCGGCCGCCGCAGCCACGGGCAGGCTCCTGCTTCTGCTGCTGGTGGGGCTCACGGCGCCTGCCTTGGCGCTGGCCGGCTACATCGAGGCTCTTGCAGCCAATGCCGGAACAGGATTTGCTGTTGCTGAGCCTCAAATCGCAATGTTTTGTGGGAAGTTAAATATGCATGTGAACATTCAGACTGGGAAATGGGAACCTGATCCAACAGGCACCAAGAGCTGCTTTGAAACAAAAGAAGAAGTTCTTCAGTACTGTCAGGAGGTAAGAGTGTTGCCAGTAAGTTGAAAGTGTTATTTTTCTGGGGCAGGGTTGAATCTGTTTACCTTAGAAATAGATATTCTGTCATTCTCTTTTGACCTAAGACCAAGATGCTAATGACTGGAGCCCCAAGCCTTTTGTTTCTAAATGTGTGGCATGACTGAGACCTCTCAAAGGCTTTGCCTGCGTGTTCTGTGAGCTCTCAGTTCTTTAAGGAAGGGATA</dnaseq>| | sequence = <dnaseq>AGATGCTTCTGGGTCGCGGTGTGCTAAGCGAGGAGTCCGAGTGTGTGAGCTTGAGAGCCGCGCGCTAGAGCGACCCGGCGAGGGATGGCGGCCACCGGGACCGCGGCCGCCGCAGCCACGGGCAGGCTCCTGCTTCTGCTGCTGGTGGGGCTCACGGCGCCTGCCTTGGCGCTGGCCGGCTACATCGAGGCTCTTGCAGCCAATGCCGGAACAGGATTTGCTGTTGCTGAGCCTCAAATCGCAATGTTTTGTGGGAAGTTAAATATGCATGTGAACATTCAGACTGGGAAATGGGAACCTGATCCAACAGGCACCAAGAGCTGCTTTGAAACAAAAGAAGAAGTTCTTCAGTACTGTCAGGAGGTAAGAGTGTTGCCAGTAAGTTGAAAGTGTTATTTTTCTGGGGCAGGGTTGAATCTGTTTACCTTAGAAATAGATATTCTGTCATTCTCTTTTGACCTAAGACCAAGATGCTAATGACTGGAGCCCCAAGCCTTTTGTTTCTAAATGTGTGGCATGACTGAGACCTCTCAAAGGCTTTGCCTGCGTGTTCTGTGAGCTCTCAGTTCTTTAAGGAAGGGATA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG010042]] | + | [[Category:Sense]][[Category:NONHSAG010042]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 20:49, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT025112 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
584 nt |
| Genomic location |
chr11+:129939789..129979718 |
| Exon number |
2 |
| Exons |
129939789..129939977,129979324..129979718 |
| Genome context |
|
| Sequence |
000001 AGATGCTTCT GGGTCGCGGT GTGCTAAGCG AGGAGTCCGA GTGTGTGAGC TTGAGAGCCG CGCGCTAGAG CGACCCGGCG 000080
000081 AGGGATGGCG GCCACCGGGA CCGCGGCCGC CGCAGCCACG GGCAGGCTCC TGCTTCTGCT GCTGGTGGGG CTCACGGCGC 000160 000161 CTGCCTTGGC GCTGGCCGGC TACATCGAGG CTCTTGCAGC CAATGCCGGA ACAGGATTTG CTGTTGCTGA GCCTCAAATC 000240 000241 GCAATGTTTT GTGGGAAGTT AAATATGCAT GTGAACATTC AGACTGGGAA ATGGGAACCT GATCCAACAG GCACCAAGAG 000320 000321 CTGCTTTGAA ACAAAAGAAG AAGTTCTTCA GTACTGTCAG GAGGTAAGAG TGTTGCCAGT AAGTTGAAAG TGTTATTTTT 000400 000401 CTGGGGCAGG GTTGAATCTG TTTACCTTAG AAATAGATAT TCTGTCATTC TCTTTTGACC TAAGACCAAG ATGCTAATGA 000480 000481 CTGGAGCCCC AAGCCTTTTG TTTCTAAATG TGTGGCATGA CTGAGACCTC TCAAAGGCTT TGCCTGCGTG TTCTGTGAGC 000560 000561 TCTCAGTTCT TTAAGGAAGG GATA |
Predicted Small Protein
| Name | NONHSAT025112_smProtein_2:67 |
| Length | 22 |
| Molecular weight | 2276.636 |
| Aromaticity | 0.0 |
| Instability index | 75.0238095238 |
| Isoelectric point | 5.98406982422 |
| Runs | 5 |
| Runs residual | 0.00816326530612 |
| Runs probability | 0.0148383677795 |
| Amino acid sequence | MLLGRGVLSEESECVSLRAAR |
| Secondary structure | LLLLLLLLLLLLLEELHHHLL |
| PRMN | - |
| PiMo | - |
