Difference between revisions of "NONHSAT026069"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>AGGAAAGGGCCCTGACAAGAGGATGGGACTGCAGTTGTGGCTGCCAGgttggagtgcagtggcacgatctcggctcagtgcaacctccgcctcctgagttcaagtgattctcctgcctcagcctccctagtagctgggattacaggtagacccagtgtaatcacaagcatccttgtaagtggcaaagaggcagaggagacagcgccagagaggcagctgcatgagaaggatcaagatgttgctgactttgaagttggaagaagaaggccatgagcctcagtatgtgggcggcttctagaagctggaaggggcaaggagatggatttgacccttcagcctccaggggcagctgtacctgccatcactgattgtagcctggtgaggcctgttttagacttctgacctgtagagctgtaacataatacatttgggttgttttcaaccactaagtttgtggtaatttgttgtagcagctgtagaaaatgaatacatatgaatcctctggcatttgtttgagatttgctctatggcctagtatgtggttgtaaatgttccatctgtgcctgaaaaaatgtatattTCTAATTCAGTAGTCTCTGCTTTTTTTTTTTATTTTGTACCCCATCAATAAAATGATTTTCAGCATGTATCCCCAAATAAACAATATTTTATTTATTGATTGATTGATAAACAGACATGTTTAATGATAGCTTGCTTTTCACAGAGGTGACTTCGGAGACTTCTAATCTATAATCCAGGAGTATATAACCATGCAGCACAGACCAATTAGTCACATGTAAAATAAACTAGATTCTTACCAC</dnaseq>| | sequence = <dnaseq>AGGAAAGGGCCCTGACAAGAGGATGGGACTGCAGTTGTGGCTGCCAGgttggagtgcagtggcacgatctcggctcagtgcaacctccgcctcctgagttcaagtgattctcctgcctcagcctccctagtagctgggattacaggtagacccagtgtaatcacaagcatccttgtaagtggcaaagaggcagaggagacagcgccagagaggcagctgcatgagaaggatcaagatgttgctgactttgaagttggaagaagaaggccatgagcctcagtatgtgggcggcttctagaagctggaaggggcaaggagatggatttgacccttcagcctccaggggcagctgtacctgccatcactgattgtagcctggtgaggcctgttttagacttctgacctgtagagctgtaacataatacatttgggttgttttcaaccactaagtttgtggtaatttgttgtagcagctgtagaaaatgaatacatatgaatcctctggcatttgtttgagatttgctctatggcctagtatgtggttgtaaatgttccatctgtgcctgaaaaaatgtatattTCTAATTCAGTAGTCTCTGCTTTTTTTTTTTATTTTGTACCCCATCAATAAAATGATTTTCAGCATGTATCCCCAAATAAACAATATTTTATTTATTGATTGATTGATAAACAGACATGTTTAATGATAGCTTGCTTTTCACAGAGGTGACTTCGGAGACTTCTAATCTATAATCCAGGAGTATATAACCATGCAGCACAGACCAATTAGTCACATGTAAAATAAACTAGATTCTTACCAC</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG010301]][[Category:Transcripts]] |
Latest revision as of 20:51, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT026069 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
821 nt |
Genomic location |
chr12-:6548167..6560681 |
Exon number |
3 |
Exons |
6548167..6548842,6557806..6557903,6560635..6560681 |
Genome context |
|
Sequence |
000001 AGGAAAGGGC CCTGACAAGA GGATGGGACT GCAGTTGTGG CTGCCAGgtt ggagtgcagt ggcacgatct cggctcagtg 000080
000081 caacctccgc ctcctgagtt caagtgattc tcctgcctca gcctccctag tagctgggat tacaggtaga cccagtgtaa 000160 000161 tcacaagcat ccttgtaagt ggcaaagagg cagaggagac agcgccagag aggcagctgc atgagaagga tcaagatgtt 000240 000241 gctgactttg aagttggaag aagaaggcca tgagcctcag tatgtgggcg gcttctagaa gctggaaggg gcaaggagat 000320 000321 ggatttgacc cttcagcctc caggggcagc tgtacctgcc atcactgatt gtagcctggt gaggcctgtt ttagacttct 000400 000401 gacctgtaga gctgtaacat aatacatttg ggttgttttc aaccactaag tttgtggtaa tttgttgtag cagctgtaga 000480 000481 aaatgaatac atatgaatcc tctggcattt gtttgagatt tgctctatgg cctagtatgt ggttgtaaat gttccatctg 000560 000561 tgcctgaaaa aatgtatatt TCTAATTCAG TAGTCTCTGC TTTTTTTTTT TATTTTGTAC CCCATCAATA AAATGATTTT 000640 000641 CAGCATGTAT CCCCAAATAA ACAATATTTT ATTTATTGAT TGATTGATAA ACAGACATGT TTAATGATAG CTTGCTTTTC 000720 000721 ACAGAGGTGA CTTCGGAGAC TTCTAATCTA TAATCCAGGA GTATATAACC ATGCAGCACA GACCAATTAG TCACATGTAA 000800 000801 AATAAACTAG ATTCTTACCA C |
Predicted Small Protein
Name | NONHSAT026069_smProtein_269:367 |
Length | 33 |
Molecular weight | 3441.7697 |
Aromaticity | 0.09375 |
Instability index | 79.621875 |
Isoelectric point | 7.86859130859 |
Runs | 5 |
Runs residual | 0.0353954081633 |
Runs probability | 0.0231937820173 |
Amino acid sequence | MSLSMWAASRSWKGQGDGFDPSASRGSCTCHH |
Secondary structure | LLLLHHHHHHHHLLLLLLLLLLLLLLLEELLL |
PRMN | - |
PiMo | - |