Difference between revisions of "NONHSAT026220"
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==Annotated Information==
===Transcriptomic Nomeclature===
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sequence = <dnaseq>AACAATAATTTAAAAAACAGATAGATTGTTGTTCTGATAGAATCCTGAGATACTTCACTTCTTCAGGAAAATCTAAACCAGTCAACGGTTGCTAGAAATGCCTCAACCTCTAGTAATCCTTTAACTAGACCTGAGACTGCAGACAGCTTGCGGGTGGTTAGTTGGTAATGCCATATGATTTTAGACATCTGCTGTATTGGAATGTTAAGCATCAGGATTGAGGACAACTGGACGATTTTAGAAAGTGTGAGAATGATGTAAATAGAATGAGAGTCTTCAACTATTTAGTAATTTTTTCCTCCTGTCCCAACTTCTGTTCTTTCAAGCAATGCCCTGCCCTAAGGAAGACACTCCCAATTCTGTTTGGGAGCCTGCGAAGGCAAAATATGTCTTTAGAGATGTGGTGCAGATAACCTGTCTGGATGGGTTTGAAGTTGTGGAGGGACGTGTTGGTGCAACATCTTTCTATTCGACTTGTCAAAGCAATGGAAAGTGGAGTAATTCCAAACTGAAATGTCAACCTGTGGACTGTGGCATTCCT</dnaseq>| | sequence = <dnaseq>AACAATAATTTAAAAAACAGATAGATTGTTGTTCTGATAGAATCCTGAGATACTTCACTTCTTCAGGAAAATCTAAACCAGTCAACGGTTGCTAGAAATGCCTCAACCTCTAGTAATCCTTTAACTAGACCTGAGACTGCAGACAGCTTGCGGGTGGTTAGTTGGTAATGCCATATGATTTTAGACATCTGCTGTATTGGAATGTTAAGCATCAGGATTGAGGACAACTGGACGATTTTAGAAAGTGTGAGAATGATGTAAATAGAATGAGAGTCTTCAACTATTTAGTAATTTTTTCCTCCTGTCCCAACTTCTGTTCTTTCAAGCAATGCCCTGCCCTAAGGAAGACACTCCCAATTCTGTTTGGGAGCCTGCGAAGGCAAAATATGTCTTTAGAGATGTGGTGCAGATAACCTGTCTGGATGGGTTTGAAGTTGTGGAGGGACGTGTTGGTGCAACATCTTTCTATTCGACTTGTCAAAGCAATGGAAAGTGGAGTAATTCCAAACTGAAATGTCAACCTGTGGACTGTGGCATTCCT</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG010360]][[Category:Transcripts]] |
Latest revision as of 20:52, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT026220 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
541 nt |
| Genomic location |
chr12+:7173496..7174966 |
| Exon number |
3 |
| Exons |
7173496..7173937,7174343..7174421,7174947..7174966 |
| Genome context |
|
| Sequence |
000001 AACAATAATT TAAAAAACAG ATAGATTGTT GTTCTGATAG AATCCTGAGA TACTTCACTT CTTCAGGAAA ATCTAAACCA 000080
000081 GTCAACGGTT GCTAGAAATG CCTCAACCTC TAGTAATCCT TTAACTAGAC CTGAGACTGC AGACAGCTTG CGGGTGGTTA 000160 000161 GTTGGTAATG CCATATGATT TTAGACATCT GCTGTATTGG AATGTTAAGC ATCAGGATTG AGGACAACTG GACGATTTTA 000240 000241 GAAAGTGTGA GAATGATGTA AATAGAATGA GAGTCTTCAA CTATTTAGTA ATTTTTTCCT CCTGTCCCAA CTTCTGTTCT 000320 000321 TTCAAGCAAT GCCCTGCCCT AAGGAAGACA CTCCCAATTC TGTTTGGGAG CCTGCGAAGG CAAAATATGT CTTTAGAGAT 000400 000401 GTGGTGCAGA TAACCTGTCT GGATGGGTTT GAAGTTGTGG AGGGACGTGT TGGTGCAACA TCTTTCTATT CGACTTGTCA 000480 000481 AAGCAATGGA AAGTGGAGTA ATTCCAAACT GAAATGTCAA CCTGTGGACT GTGGCATTCC T |
Predicted Small Protein
| Name | NONHSAT026220_smProtein_266:412 |
| Length | 49 |
| Molecular weight | 5733.8683 |
| Aromaticity | 0.145833333333 |
| Instability index | 69.3041666667 |
| Isoelectric point | 9.93011474609 |
| Runs | 9 |
| Runs residual | 0.0219298245614 |
| Runs probability | 0.0482443227541 |
| Amino acid sequence | MRVFNYLVIFSSCPNFCSFKQCPALRKTLPILFGSLRRQNMSLEMWCR |
| Secondary structure | LLEEEEEEEELLLLLLLLLLLLHHHHLLLHHHHHHHHHLLLLEEEEEL |
| PRMN | - |
| PiMo | - |
