Difference between revisions of "NONHSAT028821"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GGTAGAAACCCAGCCCTGCATGCCCCAAACTCCCCATCGACCCCTCATCCTCAAGACTGGCAGCAAGTTCACCGTCCGAACAAGGCTGCTGGTGAGACTCCAGGAAGGCAATGAGTCACTGACTGTGGAAGTCTCCATTGACAGGAATCCTCCTCAATTACAAGGGTAGGTGCTTGACAAGGACACTGCAAACATCtgtacagtgtatgacctgcagaaccacattcggcagccctgGTGGCACAAACAAGGAAGAGGGGGATTTGGGATATGGACAAAGGGAGATGGCGAGATCTGAAATGAAGTGGAACTTCTGTTTTTTTTTTTCTGCTGAGTTTTTAGAATAATTCCATTCCTTGTCTCCATGTATCTTCCTCCTGGAACAGCTTCCGGAAGTTCAACATTCTGACTTCAAACCAGAAAACTTTGACCCCCGAGAAGGGGCAGAGTCAGGGTTTGATTTGGGACTTTGGTTACCTGGTAAGAATAGTTTGTGACCTATGCttttattactatttttatttttttgagacggagtctcactctgtcccccaggctggagtgcagtggtgccatcttggctcacagcaacctccgcctcccgggttcaagcaattcttctgtctcagcctcctgagtagctgagactataggcacacaccaccatgcccggctaatttttgtatttttagtagagatagggtttcaccatattgg</dnaseq>| | sequence = <dnaseq>GGTAGAAACCCAGCCCTGCATGCCCCAAACTCCCCATCGACCCCTCATCCTCAAGACTGGCAGCAAGTTCACCGTCCGAACAAGGCTGCTGGTGAGACTCCAGGAAGGCAATGAGTCACTGACTGTGGAAGTCTCCATTGACAGGAATCCTCCTCAATTACAAGGGTAGGTGCTTGACAAGGACACTGCAAACATCtgtacagtgtatgacctgcagaaccacattcggcagccctgGTGGCACAAACAAGGAAGAGGGGGATTTGGGATATGGACAAAGGGAGATGGCGAGATCTGAAATGAAGTGGAACTTCTGTTTTTTTTTTTCTGCTGAGTTTTTAGAATAATTCCATTCCTTGTCTCCATGTATCTTCCTCCTGGAACAGCTTCCGGAAGTTCAACATTCTGACTTCAAACCAGAAAACTTTGACCCCCGAGAAGGGGCAGAGTCAGGGTTTGATTTGGGACTTTGGTTACCTGGTAAGAATAGTTTGTGACCTATGCttttattactatttttatttttttgagacggagtctcactctgtcccccaggctggagtgcagtggtgccatcttggctcacagcaacctccgcctcccgggttcaagcaattcttctgtctcagcctcctgagtagctgagactataggcacacaccaccatgcccggctaatttttgtatttttagtagagatagggtttcaccatattgg</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG011381]][[Category:Transcripts]] |
Latest revision as of 21:03, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT028821 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
717 nt |
| Genomic location |
chr12-:56743644..56744965 |
| Exon number |
3 |
| Exons |
56743644..56744216,56744613..56744672,56744882..56744965 |
| Genome context |
|
| Sequence |
000001 GGTAGAAACC CAGCCCTGCA TGCCCCAAAC TCCCCATCGA CCCCTCATCC TCAAGACTGG CAGCAAGTTC ACCGTCCGAA 000080
000081 CAAGGCTGCT GGTGAGACTC CAGGAAGGCA ATGAGTCACT GACTGTGGAA GTCTCCATTG ACAGGAATCC TCCTCAATTA 000160 000161 CAAGGGTAGG TGCTTGACAA GGACACTGCA AACATCtgta cagtgtatga cctgcagaac cacattcggc agccctgGTG 000240 000241 GCACAAACAA GGAAGAGGGG GATTTGGGAT ATGGACAAAG GGAGATGGCG AGATCTGAAA TGAAGTGGAA CTTCTGTTTT 000320 000321 TTTTTTTCTG CTGAGTTTTT AGAATAATTC CATTCCTTGT CTCCATGTAT CTTCCTCCTG GAACAGCTTC CGGAAGTTCA 000400 000401 ACATTCTGAC TTCAAACCAG AAAACTTTGA CCCCCGAGAA GGGGCAGAGT CAGGGTTTGA TTTGGGACTT TGGTTACCTG 000480 000481 GTAAGAATAG TTTGTGACCT ATGCttttat tactattttt atttttttga gacggagtct cactctgtcc cccaggctgg 000560 000561 agtgcagtgg tgccatcttg gctcacagca acctccgcct cccgggttca agcaattctt ctgtctcagc ctcctgagta 000640 000641 gctgagacta taggcacaca ccaccatgcc cggctaattt ttgtattttt agtagagata gggtttcacc atattgg |
Predicted Small Protein
| Name | NONHSAT028821_smProtein_206:346 |
| Length | 47 |
| Molecular weight | 5294.864 |
| Aromaticity | 0.173913043478 |
| Instability index | 43.3413043478 |
| Isoelectric point | 4.92950439453 |
| Runs | 7 |
| Runs residual | 0.00918737060041 |
| Runs probability | 0.0293360587479 |
| Amino acid sequence | MTCRTTFGSPGGTNKEEGDLGYGQREMARSEMKWNFCFFFSAEFLE |
| Secondary structure | LEEEELLLLLLLLLLLLLLLLLLHHHHHHHHHHHLEEEEEEEEEEL |
| PRMN | - |
| PiMo | - |
