Difference between revisions of "NONHSAT030011"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>TTGCCAGGCTCTGGGCTGGAGCGGTGTCTCTTCCTTCCTGGGAATGGATGTGCGGCGGGGGGGACTGCGCCCGGCTGGGGCGGGGCCGAATCGTGCCTTTTAGATAGTCACAACTTAGCCTCCTCCTTTTCCATCCGCGATTTTTTTGGAATTCTCCACTTTACCAATACTTACAGGATCTGGGACACACAGACTTTGAAATATGTTCTTCTTTGTCACCAAAAACAGAAAAATGCACAACAGAGGGACAACAAAAGCCTCCTACAAGAGTCCTACCAAAAGGGTAAAGTCCGCATGGAATTAGAGGGGGAAAGTCTGCACTGGAACCTGCTGTGGCCATTTTTTTTCTGTTGTTGCTGCTTCTCTAGTGGAGTTACTGCAGCTTAGGGATGGTTCCTGGAAGTGGACACATTTTACAAAAACGTTTTTTAAATACACGCCAGCTCTTCGAGAAGCACTTTTTTCCTTCCGTCATGCTTCATACTATATTGTATTGTACTAACCCCTCATGCTGGGATGAGCGACTGCCTAGCAAGCAACCCACTGCCTACTAACATCAAGAGGGGCTAAATAAAACTGCATTTTCCTTGCAAGGACAACTTCTACCGTATGaatatatattat</dnaseq>| | sequence = <dnaseq>TTGCCAGGCTCTGGGCTGGAGCGGTGTCTCTTCCTTCCTGGGAATGGATGTGCGGCGGGGGGGACTGCGCCCGGCTGGGGCGGGGCCGAATCGTGCCTTTTAGATAGTCACAACTTAGCCTCCTCCTTTTCCATCCGCGATTTTTTTGGAATTCTCCACTTTACCAATACTTACAGGATCTGGGACACACAGACTTTGAAATATGTTCTTCTTTGTCACCAAAAACAGAAAAATGCACAACAGAGGGACAACAAAAGCCTCCTACAAGAGTCCTACCAAAAGGGTAAAGTCCGCATGGAATTAGAGGGGGAAAGTCTGCACTGGAACCTGCTGTGGCCATTTTTTTTCTGTTGTTGCTGCTTCTCTAGTGGAGTTACTGCAGCTTAGGGATGGTTCCTGGAAGTGGACACATTTTACAAAAACGTTTTTTAAATACACGCCAGCTCTTCGAGAAGCACTTTTTTCCTTCCGTCATGCTTCATACTATATTGTATTGTACTAACCCCTCATGCTGGGATGAGCGACTGCCTAGCAAGCAACCCACTGCCTACTAACATCAAGAGGGGCTAAATAAAACTGCATTTTCCTTGCAAGGACAACTTCTACCGTATGaatatatattat</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG011962]][[Category:Transcripts]] |
Latest revision as of 21:08, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT030011 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
624 nt |
| Genomic location |
chr12+:95611905..95693212 |
| Exon number |
3 |
| Exons |
95611905..95612053,95645716..95645847,95692870..95693212 |
| Genome context |
|
| Sequence |
000001 TTGCCAGGCT CTGGGCTGGA GCGGTGTCTC TTCCTTCCTG GGAATGGATG TGCGGCGGGG GGGACTGCGC CCGGCTGGGG 000080
000081 CGGGGCCGAA TCGTGCCTTT TAGATAGTCA CAACTTAGCC TCCTCCTTTT CCATCCGCGA TTTTTTTGGA ATTCTCCACT 000160 000161 TTACCAATAC TTACAGGATC TGGGACACAC AGACTTTGAA ATATGTTCTT CTTTGTCACC AAAAACAGAA AAATGCACAA 000240 000241 CAGAGGGACA ACAAAAGCCT CCTACAAGAG TCCTACCAAA AGGGTAAAGT CCGCATGGAA TTAGAGGGGG AAAGTCTGCA 000320 000321 CTGGAACCTG CTGTGGCCAT TTTTTTTCTG TTGTTGCTGC TTCTCTAGTG GAGTTACTGC AGCTTAGGGA TGGTTCCTGG 000400 000401 AAGTGGACAC ATTTTACAAA AACGTTTTTT AAATACACGC CAGCTCTTCG AGAAGCACTT TTTTCCTTCC GTCATGCTTC 000480 000481 ATACTATATT GTATTGTACT AACCCCTCAT GCTGGGATGA GCGACTGCCT AGCAAGCAAC CCACTGCCTA CTAACATCAA 000560 000561 GAGGGGCTAA ATAAAACTGC ATTTTCCTTG CAAGGACAAC TTCTACCGTA TGaatatata ttat |
Predicted Small Protein
| Name | NONHSAT030011_smProtein_389:553 |
| Length | 55 |
| Molecular weight | 6365.3488 |
| Aromaticity | 0.12962962963 |
| Instability index | 78.3240740741 |
| Isoelectric point | 9.23699951172 |
| Runs | 7 |
| Runs residual | 0.0330623306233 |
| Runs probability | 0.0412345118227 |
| Amino acid sequence | MVPGSGHILQKRFLNTRQLFEKHFFPSVMLHTILYCTNPSCWDERLPSKQPTAY |
| Secondary structure | LLLLLLHHHHHHLLLHHHHHHHHLLLLLLEEEEEELLLLLLLLLLLLLLLLLLL |
| PRMN | - |
| PiMo | - |
