Difference between revisions of "NONHSAT030642"
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sequence = <dnaseq>ATTTCTCCTAAGACGTATTCATGTCTATCACATTTGTCTTTGCCAGGAACTTTCAGGACCAGCTTCGAATGGAGGGATCAGCCAGACAAACACCTATGACGCCCAGTATGAGAGGGCCATCCAGGAGAGCCTCCTCACCAGCACAGAAGGCCTGTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATGACTTGCAGCTAGCCATGGAGCTCTCTGCCAAAGAGCTGGAGGAATGGGAGCTCCGGCTCCAGGAGGAAGAGGCTGAGCTCCAGCAAGTCTTACAGCTGTCACTCACTGACAAATAGACCTTTCAGCCTGTGAGCCTCTGCACAAAGCAGAGGCTGTGGGCTGTCACAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACAACTGCCCCTTCTTTATGCAGAGGTGCAGAACCAGGGACTCCTGGGCCCATCCAGGCTGCTCCCTGGGGTGGAGAAGGGACCAGGGATTGCAGGCCCCATCTCCAGGCTAAGGGGAGGAGAGCATCATCACTTTCCATTAGCTGTATTGGCTTGCAGGTCACATTTTTACTACCAGCTTTAGACAAAACCCCAATCCCCGCAGGTTTGTAGATAAATTTTTATCAAGGAGTGATAACAAGACAAGTTATTGCAGAGTCAGGGTGCTTTTATATATAAGAGCAGCAGCCGCCTTTGTAAAGTGTGATCTATGAGAATTGGAGACACTTCTTTACTGTT</dnaseq>| | sequence = <dnaseq>ATTTCTCCTAAGACGTATTCATGTCTATCACATTTGTCTTTGCCAGGAACTTTCAGGACCAGCTTCGAATGGAGGGATCAGCCAGACAAACACCTATGACGCCCAGTATGAGAGGGCCATCCAGGAGAGCCTCCTCACCAGCACAGAAGGCCTGTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATGACTTGCAGCTAGCCATGGAGCTCTCTGCCAAAGAGCTGGAGGAATGGGAGCTCCGGCTCCAGGAGGAAGAGGCTGAGCTCCAGCAAGTCTTACAGCTGTCACTCACTGACAAATAGACCTTTCAGCCTGTGAGCCTCTGCACAAAGCAGAGGCTGTGGGCTGTCACAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACAACTGCCCCTTCTTTATGCAGAGGTGCAGAACCAGGGACTCCTGGGCCCATCCAGGCTGCTCCCTGGGGTGGAGAAGGGACCAGGGATTGCAGGCCCCATCTCCAGGCTAAGGGGAGGAGAGCATCATCACTTTCCATTAGCTGTATTGGCTTGCAGGTCACATTTTTACTACCAGCTTTAGACAAAACCCCAATCCCCGCAGGTTTGTAGATAAATTTTTATCAAGGAGTGATAACAAGACAAGTTATTGCAGAGTCAGGGTGCTTTTATATATAAGAGCAGCAGCCGCCTTTGTAAAGTGTGATCTATGAGAATTGGAGACACTTCTTTACTGTT</dnaseq>| | ||
}} | }} | ||
− | [[Category:Sense]][[Category:NONHSAG012258]][[Category:Transcripts]] | + | [[Category:Sense]][[Category:NONHSAG012258]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 21:11, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT030642 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
762 nt |
Genomic location |
chr12+:110474020..110475811 |
Exon number |
2 |
Exons |
110474020..110474133,110475164..110475811 |
Genome context |
|
Sequence |
000001 ATTTCTCCTA AGACGTATTC ATGTCTATCA CATTTGTCTT TGCCAGGAAC TTTCAGGACC AGCTTCGAAT GGAGGGATCA 000080
000081 GCCAGACAAA CACCTATGAC GCCCAGTATG AGAGGGCCAT CCAGGAGAGC CTCCTCACCA GCACAGAAGG CCTGTGCCCC 000160 000161 AGCGCCCTGA GCGAGACAAG CCGTTTTGAT AATGACTTGC AGCTAGCCAT GGAGCTCTCT GCCAAAGAGC TGGAGGAATG 000240 000241 GGAGCTCCGG CTCCAGGAGG AAGAGGCTGA GCTCCAGCAA GTCTTACAGC TGTCACTCAC TGACAAATAG ACCTTTCAGC 000320 000321 CTGTGAGCCT CTGCACAAAG CAGAGGCTGT GGGCTGTCAC AGATGCTGTG TCAACCAGGG CCCTAGGGCT AAGGGCCTGC 000400 000401 ACCTTGCGTG CATGCAGCAG GCAACAACTG CCCCTTCTTT ATGCAGAGGT GCAGAACCAG GGACTCCTGG GCCCATCCAG 000480 000481 GCTGCTCCCT GGGGTGGAGA AGGGACCAGG GATTGCAGGC CCCATCTCCA GGCTAAGGGG AGGAGAGCAT CATCACTTTC 000560 000561 CATTAGCTGT ATTGGCTTGC AGGTCACATT TTTACTACCA GCTTTAGACA AAACCCCAAT CCCCGCAGGT TTGTAGATAA 000640 000641 ATTTTTATCA AGGAGTGATA ACAAGACAAG TTATTGCAGA GTCAGGGTGC TTTTATATAT AAGAGCAGCA GCCGCCTTTG 000720 000721 TAAAGTGTGA TCTATGAGAA TTGGAGACAC TTCTTTACTG TT |
Predicted Small Protein
Name | NONHSAT030642_smProtein_20:169 |
Length | 50 |
Molecular weight | 5369.1317 |
Aromaticity | 0.0612244897959 |
Instability index | 88.1959183673 |
Isoelectric point | 11.705871582 |
Runs | 6 |
Runs residual | 0.0396028681743 |
Runs probability | 0.031384325502 |
Amino acid sequence | MSITFVFARNFQDQLRMEGSARQTPMTPSMRGPSRRASSPAQKACAPAP |
Secondary structure | LEEEEEEHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLHHHHLLLLLL |
PRMN | - |
PiMo | - |