Difference between revisions of "NONHSAT033842"

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sequence = <dnaseq>AATATCCTGACCTCACTTTCCTCCCTCCCTTTAATCTCCTGCAGGTATTCTCCACTGGTTGAATGCAAATGGAAGCCAGAGGAAAAGGGAACCCTTGACACAGTTTTCATATAGATTGGCCTCCAGGGCAGACAGCAGGAGTGGGGTTTAATCTGGACTGAATTGGAGGAAAGGAACTGGCACCAGAGTGGAGGCTGGAAGGATGGTGGAACTGACACTGGGACAGAACACAGAAAACAGAATCTAATGCTATTGCTCTGGCTATATCAAATAAAAGTGTCAAGAGTGAGCATCCTTGCCTTGTGCTGAATCACAAAGGAATACCTTTCAGTTTTTCTCCATTGATTATGATAGCAGTGGGCTTTTCACAGTGGGCTTTACTGTGTTGAGGTACCCTAATGACAAGTTCACCCCAGTGTTTTCTGAGGAGTCTACCTGGAAATGAGAACCATCTGTCCTTCCTATAGTAGTTCTTCTCAGAATGCCGACTCTATGCTAATGGTGAGAAAGTAGCTTCCAGATCAGACCCCCTAAAAATATATCTAAAAACTCAACTCCTGTGGTCATCTCTTTCAAGTATTTAAACCTCAGAATTTTCTCCAGCAAGCATATAGGCCCCATAGAGTCCATAAGCTTGCAATGTCTTGGCCATGTGTACCCATGTGGTACATTCAACCACCAAACTGGAATACGATATTGCATTTCCTGGGCAGGATTAAGAGTGAGCTCTCTTAGGCTCAGATGACCCCCACAATCAAAGGTAAGAGGGCTGTAACTGAAATATCACTCAACAGAGGAGGTCTGATGGCCGGGAGGACAGGAAGAAGGAACCCACAATGAAGCAAAAGTTGCGTTTAACTCTGTCCTCACCATTCCTCTCCTGGACCTGTCCTAAACTGGAAGCTGGGGGAGGATGGAGTGCTGGAATGCTGCAGAAGTCTCATGGGAGGGCGCCTGGTGTTCACCACATGTGTACACTGTTGCACGACCAGATGGAAATTTGAATGCTGGGGCTCAGTGGAACACCTGAAGGAAGCTGGTGAGGCAGATGTCCCGCTATGCCTTCCAAGTGTCATGCAACCAGTTCATGCCTGTCAGCATCTCTGCCGGTGGACTCTGTGAGTCAGCAAATCTACAGAGCAGAGAGCCACAAGTGGGGACAGATGTGGTCAAATGCCATTTAAATCAGTGATTCTCAACCCAGGAGTTGTCATGGCACTGGCCTTGAGTGAGCTGGACCAAGGGAAGTGGTAGAATTCCCCATGAAGGACCAAGTGAGCAGATAGAAGTTTCTCCATTTTAACTTTTTCTGAGTCAATTTAAAAAACACCTAGTGCCTTTTTCTGTACATAGTGCCTGTGGGTTTGAATTTAAGCCTACCCAAATGTGCTTTTATCCCACCTATTTTGAACCTTGCATGTCTCCGGGATAAGAATTAACATAAGCTATAAATATTCTTCCAGGACTAATTATTAACCGTGAATGTTGAGCGGCCTTGACAAATATAAAATGTTATATATAGGCCCAAGAGTAGATCAGAGAGTTATCTATCTACTTCAAGTTGAGACTCAGAGTTTTCATTAAACTCTGCAGTCTCACAGTATTTCCAATCATTTCAGGGCAGACGAAAGTTCCGTGGTATATCTTTTTAATGTGGCAGGCCTCGAGGGTGGATTGAGTTAGGCAATTTATCCCCTTTTATGCCCTATATTCACATGCAACACTCCAATGGGGTAACATAAAACCACAGACAGGTTTCTTTACACCGGTATTTAAGGGAACTAGGAAAGCAGCCCAAATCATGTGGAGAAAGCTGGGGAAAGAAGTATCAGAGGAGAAAGAGGACCTTAGCAGAAATGACAAAAGTGAAAAACCTTCCTAACTCCTTCAGACATGATGCTTAAAATTGTGTTTCTTTGGCAACTTATAATTTTCTGAAGCTGGTTCTCAGCCTCAGATCCTCCCCCAAGGTTTTTATGTTGTATTTTGACTCAGTAGGAGGGATCCAGTCCCAGACCTTCCGGCTCTCACCAGTACACCACAGGCTAACGCCATCCAGCAATCAGATGACAGGAGGAGGAGAGGTTCAAAGAGGACTACTGTATTTCTCAGAAGGGGCTGGCTCATCTACCCTCCACTGTATTACTCACACTGTAGATGCAGAAAACATGTCAAAGTATACTGGGGCTCTGCAATGCATGCACCCACACACATGTACACATACGCACAGACTTCCAAACTAAAAAGGAGAACAGAGCTCAAAAGGGGACAGTGTGCAACTGGTGCTCCATGTTGTAAGGACCTCCCCTCCTGCGGGCGCGGCTACCCCAGCAGGCTTGTCCGGGCATGTCCGCCCAGTTGACGCCAGGCCAAGTTTTACGGGAGGAATTGGCCTGTGTCTAAAGCTGGAGTTCAGCTTTGCTGACTATGGAGACTGATCTGTTGGTTGTCAGCAAAGAAAAGGTGGTTTCAAAAGAGCAGCAGAGGACTCTGTGCTAGTTGCTACTGGCCAGCTTTGACTCCGATTGGAAGCTTGAAAAACATAGATTGGAAGCTATGCAGAATATCCAGTGACAGAAATAAATCAGAGATTGCCAGGGGCTGAGGGTGAGAGGAAGGAGATTGACTTCAAAGGGGCACAGATAATTTCTCAGGGTGTCGGAAATATTCTGTCTTGATTGAGGTGGTGATTACTCGACTGTATATGCTTGTAAAAATTTGTAGAACTGTGTGCCTGAAAAGGGTGAATTCTACTGTATGTAAATTATAACTCGATAAACCTGATTTTTAAAAACACTGTAGTTTGGGAGGCCATATAAAACCAAATAACATTTTGAGTCATTAATGCCTCTTTAAGAATATTTTGGATTGATTTTTTTTATTAGATTAAAA</dnaseq>|
 
sequence = <dnaseq>AATATCCTGACCTCACTTTCCTCCCTCCCTTTAATCTCCTGCAGGTATTCTCCACTGGTTGAATGCAAATGGAAGCCAGAGGAAAAGGGAACCCTTGACACAGTTTTCATATAGATTGGCCTCCAGGGCAGACAGCAGGAGTGGGGTTTAATCTGGACTGAATTGGAGGAAAGGAACTGGCACCAGAGTGGAGGCTGGAAGGATGGTGGAACTGACACTGGGACAGAACACAGAAAACAGAATCTAATGCTATTGCTCTGGCTATATCAAATAAAAGTGTCAAGAGTGAGCATCCTTGCCTTGTGCTGAATCACAAAGGAATACCTTTCAGTTTTTCTCCATTGATTATGATAGCAGTGGGCTTTTCACAGTGGGCTTTACTGTGTTGAGGTACCCTAATGACAAGTTCACCCCAGTGTTTTCTGAGGAGTCTACCTGGAAATGAGAACCATCTGTCCTTCCTATAGTAGTTCTTCTCAGAATGCCGACTCTATGCTAATGGTGAGAAAGTAGCTTCCAGATCAGACCCCCTAAAAATATATCTAAAAACTCAACTCCTGTGGTCATCTCTTTCAAGTATTTAAACCTCAGAATTTTCTCCAGCAAGCATATAGGCCCCATAGAGTCCATAAGCTTGCAATGTCTTGGCCATGTGTACCCATGTGGTACATTCAACCACCAAACTGGAATACGATATTGCATTTCCTGGGCAGGATTAAGAGTGAGCTCTCTTAGGCTCAGATGACCCCCACAATCAAAGGTAAGAGGGCTGTAACTGAAATATCACTCAACAGAGGAGGTCTGATGGCCGGGAGGACAGGAAGAAGGAACCCACAATGAAGCAAAAGTTGCGTTTAACTCTGTCCTCACCATTCCTCTCCTGGACCTGTCCTAAACTGGAAGCTGGGGGAGGATGGAGTGCTGGAATGCTGCAGAAGTCTCATGGGAGGGCGCCTGGTGTTCACCACATGTGTACACTGTTGCACGACCAGATGGAAATTTGAATGCTGGGGCTCAGTGGAACACCTGAAGGAAGCTGGTGAGGCAGATGTCCCGCTATGCCTTCCAAGTGTCATGCAACCAGTTCATGCCTGTCAGCATCTCTGCCGGTGGACTCTGTGAGTCAGCAAATCTACAGAGCAGAGAGCCACAAGTGGGGACAGATGTGGTCAAATGCCATTTAAATCAGTGATTCTCAACCCAGGAGTTGTCATGGCACTGGCCTTGAGTGAGCTGGACCAAGGGAAGTGGTAGAATTCCCCATGAAGGACCAAGTGAGCAGATAGAAGTTTCTCCATTTTAACTTTTTCTGAGTCAATTTAAAAAACACCTAGTGCCTTTTTCTGTACATAGTGCCTGTGGGTTTGAATTTAAGCCTACCCAAATGTGCTTTTATCCCACCTATTTTGAACCTTGCATGTCTCCGGGATAAGAATTAACATAAGCTATAAATATTCTTCCAGGACTAATTATTAACCGTGAATGTTGAGCGGCCTTGACAAATATAAAATGTTATATATAGGCCCAAGAGTAGATCAGAGAGTTATCTATCTACTTCAAGTTGAGACTCAGAGTTTTCATTAAACTCTGCAGTCTCACAGTATTTCCAATCATTTCAGGGCAGACGAAAGTTCCGTGGTATATCTTTTTAATGTGGCAGGCCTCGAGGGTGGATTGAGTTAGGCAATTTATCCCCTTTTATGCCCTATATTCACATGCAACACTCCAATGGGGTAACATAAAACCACAGACAGGTTTCTTTACACCGGTATTTAAGGGAACTAGGAAAGCAGCCCAAATCATGTGGAGAAAGCTGGGGAAAGAAGTATCAGAGGAGAAAGAGGACCTTAGCAGAAATGACAAAAGTGAAAAACCTTCCTAACTCCTTCAGACATGATGCTTAAAATTGTGTTTCTTTGGCAACTTATAATTTTCTGAAGCTGGTTCTCAGCCTCAGATCCTCCCCCAAGGTTTTTATGTTGTATTTTGACTCAGTAGGAGGGATCCAGTCCCAGACCTTCCGGCTCTCACCAGTACACCACAGGCTAACGCCATCCAGCAATCAGATGACAGGAGGAGGAGAGGTTCAAAGAGGACTACTGTATTTCTCAGAAGGGGCTGGCTCATCTACCCTCCACTGTATTACTCACACTGTAGATGCAGAAAACATGTCAAAGTATACTGGGGCTCTGCAATGCATGCACCCACACACATGTACACATACGCACAGACTTCCAAACTAAAAAGGAGAACAGAGCTCAAAAGGGGACAGTGTGCAACTGGTGCTCCATGTTGTAAGGACCTCCCCTCCTGCGGGCGCGGCTACCCCAGCAGGCTTGTCCGGGCATGTCCGCCCAGTTGACGCCAGGCCAAGTTTTACGGGAGGAATTGGCCTGTGTCTAAAGCTGGAGTTCAGCTTTGCTGACTATGGAGACTGATCTGTTGGTTGTCAGCAAAGAAAAGGTGGTTTCAAAAGAGCAGCAGAGGACTCTGTGCTAGTTGCTACTGGCCAGCTTTGACTCCGATTGGAAGCTTGAAAAACATAGATTGGAAGCTATGCAGAATATCCAGTGACAGAAATAAATCAGAGATTGCCAGGGGCTGAGGGTGAGAGGAAGGAGATTGACTTCAAAGGGGCACAGATAATTTCTCAGGGTGTCGGAAATATTCTGTCTTGATTGAGGTGGTGATTACTCGACTGTATATGCTTGTAAAAATTTGTAGAACTGTGTGCCTGAAAAGGGTGAATTCTACTGTATGTAAATTATAACTCGATAAACCTGATTTTTAAAAACACTGTAGTTTGGGAGGCCATATAAAACCAAATAACATTTTGAGTCATTAATGCCTCTTTAAGAATATTTTGGATTGATTTTTTTTATTAGATTAAAA</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:NONHSAG013524]]
+
[[Category:Intergenic]][[Category:NONHSAG013524]][[Category:Transcripts]]

Latest revision as of 21:24, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT033842

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2892 nt

Genomic location

chr13+:50964290..51104215

Exon number

6

Exons

50964290..50964427,50989225..50989338,51007549..51007686,51066787..51067189,51102002..51102200,51102316..51104215

Genome context

Sequence
000001 AATATCCTGA CCTCACTTTC CTCCCTCCCT TTAATCTCCT GCAGGTATTC TCCACTGGTT GAATGCAAAT GGAAGCCAGA 000080
000081 GGAAAAGGGA ACCCTTGACA CAGTTTTCAT ATAGATTGGC CTCCAGGGCA GACAGCAGGA GTGGGGTTTA ATCTGGACTG 000160
000161 AATTGGAGGA AAGGAACTGG CACCAGAGTG GAGGCTGGAA GGATGGTGGA ACTGACACTG GGACAGAACA CAGAAAACAG 000240
000241 AATCTAATGC TATTGCTCTG GCTATATCAA ATAAAAGTGT CAAGAGTGAG CATCCTTGCC TTGTGCTGAA TCACAAAGGA 000320
000321 ATACCTTTCA GTTTTTCTCC ATTGATTATG ATAGCAGTGG GCTTTTCACA GTGGGCTTTA CTGTGTTGAG GTACCCTAAT 000400
000401 GACAAGTTCA CCCCAGTGTT TTCTGAGGAG TCTACCTGGA AATGAGAACC ATCTGTCCTT CCTATAGTAG TTCTTCTCAG 000480
000481 AATGCCGACT CTATGCTAAT GGTGAGAAAG TAGCTTCCAG ATCAGACCCC CTAAAAATAT ATCTAAAAAC TCAACTCCTG 000560
000561 TGGTCATCTC TTTCAAGTAT TTAAACCTCA GAATTTTCTC CAGCAAGCAT ATAGGCCCCA TAGAGTCCAT AAGCTTGCAA 000640
000641 TGTCTTGGCC ATGTGTACCC ATGTGGTACA TTCAACCACC AAACTGGAAT ACGATATTGC ATTTCCTGGG CAGGATTAAG 000720
000721 AGTGAGCTCT CTTAGGCTCA GATGACCCCC ACAATCAAAG GTAAGAGGGC TGTAACTGAA ATATCACTCA ACAGAGGAGG 000800
000801 TCTGATGGCC GGGAGGACAG GAAGAAGGAA CCCACAATGA AGCAAAAGTT GCGTTTAACT CTGTCCTCAC CATTCCTCTC 000880
000881 CTGGACCTGT CCTAAACTGG AAGCTGGGGG AGGATGGAGT GCTGGAATGC TGCAGAAGTC TCATGGGAGG GCGCCTGGTG 000960
000961 TTCACCACAT GTGTACACTG TTGCACGACC AGATGGAAAT TTGAATGCTG GGGCTCAGTG GAACACCTGA AGGAAGCTGG 001040
001041 TGAGGCAGAT GTCCCGCTAT GCCTTCCAAG TGTCATGCAA CCAGTTCATG CCTGTCAGCA TCTCTGCCGG TGGACTCTGT 001120
001121 GAGTCAGCAA ATCTACAGAG CAGAGAGCCA CAAGTGGGGA CAGATGTGGT CAAATGCCAT TTAAATCAGT GATTCTCAAC 001200
001201 CCAGGAGTTG TCATGGCACT GGCCTTGAGT GAGCTGGACC AAGGGAAGTG GTAGAATTCC CCATGAAGGA CCAAGTGAGC 001280
001281 AGATAGAAGT TTCTCCATTT TAACTTTTTC TGAGTCAATT TAAAAAACAC CTAGTGCCTT TTTCTGTACA TAGTGCCTGT 001360
001361 GGGTTTGAAT TTAAGCCTAC CCAAATGTGC TTTTATCCCA CCTATTTTGA ACCTTGCATG TCTCCGGGAT AAGAATTAAC 001440
001441 ATAAGCTATA AATATTCTTC CAGGACTAAT TATTAACCGT GAATGTTGAG CGGCCTTGAC AAATATAAAA TGTTATATAT 001520
001521 AGGCCCAAGA GTAGATCAGA GAGTTATCTA TCTACTTCAA GTTGAGACTC AGAGTTTTCA TTAAACTCTG CAGTCTCACA 001600
001601 GTATTTCCAA TCATTTCAGG GCAGACGAAA GTTCCGTGGT ATATCTTTTT AATGTGGCAG GCCTCGAGGG TGGATTGAGT 001680
001681 TAGGCAATTT ATCCCCTTTT ATGCCCTATA TTCACATGCA ACACTCCAAT GGGGTAACAT AAAACCACAG ACAGGTTTCT 001760
001761 TTACACCGGT ATTTAAGGGA ACTAGGAAAG CAGCCCAAAT CATGTGGAGA AAGCTGGGGA AAGAAGTATC AGAGGAGAAA 001840
001841 GAGGACCTTA GCAGAAATGA CAAAAGTGAA AAACCTTCCT AACTCCTTCA GACATGATGC TTAAAATTGT GTTTCTTTGG 001920
001921 CAACTTATAA TTTTCTGAAG CTGGTTCTCA GCCTCAGATC