Difference between revisions of "NONHSAT036990"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>CAGCATAGAAGATGCTCAGTGTCCTGGATTACCAGATTTAATTGAAGAAAATCATGTTGTAAATAAGACAGACTTGAAGGTGGATTGTTTATCCAGTGAGAGAATGAGTTTGCCTCTTCTTGCTGGTGGAGTAGCAGATGATATTAATACTAACAAAAAAGAAGGAATTTCAGATGTTGTGGAAGGAATGGAACTGAATTCTTCAATTACATCACAGGATGTTTTGATGAGTAGCCCTGAAAAAAATACAGCTTCACAAAATAGCATCTTAGAAGAAGGGGAAACTAAAATTTCTCAGTCAGAACTATTTGATAATAAAAGTCTCACTACTGAATGCCACCTTCTTGATTCAGTAAGTTTTCCAACTTGACAAGTCCCTTTATATTCTAGATTTGTTTTATAAAATGAATATTGCTTTTCTATTTGTGTACAAGGCTTAAAATGTATATCTTGTCATTGTTTTGCTTACTCACTCTTCATTTTTCACAGAATGAAGAAAAATTTGGTGTTTATATACTTTAAAATATAGTATGTTTTAATATTAACCCTGAAGATATGTTTTTCTATATGGTTTTTCTATCAAATTTGCTCTGACAAACTGGGTACTTGAATATCTGAATATATTTCTAAGTGATTCAAGAAAAATATAAGGCAAAGTTTCTGCCCTTCTGGGGAAATAATATCTATCCCACCTTCAGTCATCATTGGTTATTTATGTCCTGCTATTTTAGTGGCTACTTCCCTGCTTTTACTTCTGGTGACCTCTTGCCTCTAAATCTAGTTCAAACAGCCCTTTTGTGAAGCCTTCTGTAAAAGCTCTTAT</dnaseq>| | sequence = <dnaseq>CAGCATAGAAGATGCTCAGTGTCCTGGATTACCAGATTTAATTGAAGAAAATCATGTTGTAAATAAGACAGACTTGAAGGTGGATTGTTTATCCAGTGAGAGAATGAGTTTGCCTCTTCTTGCTGGTGGAGTAGCAGATGATATTAATACTAACAAAAAAGAAGGAATTTCAGATGTTGTGGAAGGAATGGAACTGAATTCTTCAATTACATCACAGGATGTTTTGATGAGTAGCCCTGAAAAAAATACAGCTTCACAAAATAGCATCTTAGAAGAAGGGGAAACTAAAATTTCTCAGTCAGAACTATTTGATAATAAAAGTCTCACTACTGAATGCCACCTTCTTGATTCAGTAAGTTTTCCAACTTGACAAGTCCCTTTATATTCTAGATTTGTTTTATAAAATGAATATTGCTTTTCTATTTGTGTACAAGGCTTAAAATGTATATCTTGTCATTGTTTTGCTTACTCACTCTTCATTTTTCACAGAATGAAGAAAAATTTGGTGTTTATATACTTTAAAATATAGTATGTTTTAATATTAACCCTGAAGATATGTTTTTCTATATGGTTTTTCTATCAAATTTGCTCTGACAAACTGGGTACTTGAATATCTGAATATATTTCTAAGTGATTCAAGAAAAATATAAGGCAAAGTTTCTGCCCTTCTGGGGAAATAATATCTATCCCACCTTCAGTCATCATTGGTTATTTATGTCCTGCTATTTTAGTGGCTACTTCCCTGCTTTTACTTCTGGTGACCTCTTGCCTCTAAATCTAGTTCAAACAGCCCTTTTGTGAAGCCTTCTGTAAAAGCTCTTAT</dnaseq>| | ||
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− | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG015031]][[Category:Transcripts]] |
Latest revision as of 21:38, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT036990 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
823 nt |
Genomic location |
chr14-:55617046..55619362 |
Exon number |
3 |
Exons |
55617046..55617566,55618413..55618659,55619308..55619362 |
Genome context |
|
Sequence |
000001 CAGCATAGAA GATGCTCAGT GTCCTGGATT ACCAGATTTA ATTGAAGAAA ATCATGTTGT AAATAAGACA GACTTGAAGG 000080
000081 TGGATTGTTT ATCCAGTGAG AGAATGAGTT TGCCTCTTCT TGCTGGTGGA GTAGCAGATG ATATTAATAC TAACAAAAAA 000160 000161 GAAGGAATTT CAGATGTTGT GGAAGGAATG GAACTGAATT CTTCAATTAC ATCACAGGAT GTTTTGATGA GTAGCCCTGA 000240 000241 AAAAAATACA GCTTCACAAA ATAGCATCTT AGAAGAAGGG GAAACTAAAA TTTCTCAGTC AGAACTATTT GATAATAAAA 000320 000321 GTCTCACTAC TGAATGCCAC CTTCTTGATT CAGTAAGTTT TCCAACTTGA CAAGTCCCTT TATATTCTAG ATTTGTTTTA 000400 000401 TAAAATGAAT ATTGCTTTTC TATTTGTGTA CAAGGCTTAA AATGTATATC TTGTCATTGT TTTGCTTACT CACTCTTCAT 000480 000481 TTTTCACAGA ATGAAGAAAA ATTTGGTGTT TATATACTTT AAAATATAGT ATGTTTTAAT ATTAACCCTG AAGATATGTT 000560 000561 TTTCTATATG GTTTTTCTAT CAAATTTGCT CTGACAAACT GGGTACTTGA ATATCTGAAT ATATTTCTAA GTGATTCAAG 000640 000641 AAAAATATAA GGCAAAGTTT CTGCCCTTCT GGGGAAATAA TATCTATCCC ACCTTCAGTC ATCATTGGTT ATTTATGTCC 000720 000721 TGCTATTTTA GTGGCTACTT CCCTGCTTTT ACTTCTGGTG ACCTCTTGCC TCTAAATCTA GTTCAAACAG CCCTTTTGTG 000800 000801 AAGCCTTCTG TAAAAGCTCT TAT |
Predicted Small Protein
Name | NONHSAT036990_smProtein_137:196 |
Length | 20 |
Molecular weight | 2480.0418 |
Aromaticity | 0.157894736842 |
Instability index | 40.7947368421 |
Isoelectric point | 9.52459716797 |
Runs | 4 |
Runs residual | 0.0402476780186 |
Runs probability | 0.0228758169934 |
Amino acid sequence | MILILTKKKEFQMLWKEWN |
Secondary structure | LEEEEHHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |