Difference between revisions of "NONHSAT040202"
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sequence = <dnaseq>CAGGAGAGCTGCTTCAGAAGCTCCGATTTGGCAGCCAGATCTTCATCGAGCACGTGGCCGATGTGatgtaactgggcgcctgtacaccatctgtcaaccttGCCCATGAAGACGGAGTGGGGAAGAGAAGCCCCAGGCGGGTGGCAAGGACCTCCTCTGGGCTGTGGGCCCCTGACCAGCTGCCCCAGGAGACCACCGCCCTGAGAAGGATGCGACCTGCTCTCCAGGCTGCTGCCCTGGTGAGATAGCTGTGTTGGTTTCCCCTTGCCCCTGAGGGGAAGACGGCCCTCACTAGGGGCACAGGGGCTCCACCTGGCCAAGGCCTGCTGGGCACCCAGCTCAGACAGGTGACCTCAGATCCTTGACCACTGCCTGGCTGCTGGCTTCCCTGCAGACACTGGCTGGGCTTGGAGGAGGGACCTATGGCAGGGCCTTGCAGAGAGCAGGGGCCACTCACCGGGGGCCAGTGGAGTCCGTCCTGTAGCCAAGAAGCAGGCAAGAGAGGCTGGGACCCATCCCTGCAGCTGGGGCAGCAGTGCTGTGAGCTGTCAGTGCTTAGTTTATAGACATCATCCTGGGAGGGAGAAGTGATGAAGTAGAAAAGACGCAGAAGAAAAGATGGGACGTTTGGG</dnaseq>| | sequence = <dnaseq>CAGGAGAGCTGCTTCAGAAGCTCCGATTTGGCAGCCAGATCTTCATCGAGCACGTGGCCGATGTGatgtaactgggcgcctgtacaccatctgtcaaccttGCCCATGAAGACGGAGTGGGGAAGAGAAGCCCCAGGCGGGTGGCAAGGACCTCCTCTGGGCTGTGGGCCCCTGACCAGCTGCCCCAGGAGACCACCGCCCTGAGAAGGATGCGACCTGCTCTCCAGGCTGCTGCCCTGGTGAGATAGCTGTGTTGGTTTCCCCTTGCCCCTGAGGGGAAGACGGCCCTCACTAGGGGCACAGGGGCTCCACCTGGCCAAGGCCTGCTGGGCACCCAGCTCAGACAGGTGACCTCAGATCCTTGACCACTGCCTGGCTGCTGGCTTCCCTGCAGACACTGGCTGGGCTTGGAGGAGGGACCTATGGCAGGGCCTTGCAGAGAGCAGGGGCCACTCACCGGGGGCCAGTGGAGTCCGTCCTGTAGCCAAGAAGCAGGCAAGAGAGGCTGGGACCCATCCCTGCAGCTGGGGCAGCAGTGCTGTGAGCTGTCAGTGCTTAGTTTATAGACATCATCCTGGGAGGGAGAAGTGATGAAGTAGAAAAGACGCAGAAGAAAAGATGGGACGTTTGGG</dnaseq>| | ||
}} | }} | ||
− | [[Category:Sense]][[Category:NONHSAG016029]][[Category:Transcripts]] | + | [[Category:Sense]][[Category:NONHSAG016029]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 21:47, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT040202 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
632 nt |
Genomic location |
chr14-:104168353..104169574 |
Exon number |
2 |
Exons |
104168353..104168919,104169510..104169574 |
Genome context |
|
Sequence |
000001 CAGGAGAGCT GCTTCAGAAG CTCCGATTTG GCAGCCAGAT CTTCATCGAG CACGTGGCCG ATGTGatgta actgggcgcc 000080
000081 tgtacaccat ctgtcaacct tGCCCATGAA GACGGAGTGG GGAAGAGAAG CCCCAGGCGG GTGGCAAGGA CCTCCTCTGG 000160 000161 GCTGTGGGCC CCTGACCAGC TGCCCCAGGA GACCACCGCC CTGAGAAGGA TGCGACCTGC TCTCCAGGCT GCTGCCCTGG 000240 000241 TGAGATAGCT GTGTTGGTTT CCCCTTGCCC CTGAGGGGAA GACGGCCCTC ACTAGGGGCA CAGGGGCTCC ACCTGGCCAA 000320 000321 GGCCTGCTGG GCACCCAGCT CAGACAGGTG ACCTCAGATC CTTGACCACT GCCTGGCTGC TGGCTTCCCT GCAGACACTG 000400 000401 GCTGGGCTTG GAGGAGGGAC CTATGGCAGG GCCTTGCAGA GAGCAGGGGC CACTCACCGG GGGCCAGTGG AGTCCGTCCT 000480 000481 GTAGCCAAGA AGCAGGCAAG AGAGGCTGGG ACCCATCCCT GCAGCTGGGG CAGCAGTGCT GTGAGCTGTC AGTGCTTAGT 000560 000561 TTATAGACAT CATCCTGGGA GGGAGAAGTG ATGAAGTAGA AAAGACGCAG AAGAAAAGAT GGGACGTTTG GG |
Predicted Small Protein
Name | NONHSAT040202_smProtein_422:565 |
Length | 48 |
Molecular weight | 4977.571 |
Aromaticity | 0.0425531914894 |
Instability index | 63.7808510638 |
Isoelectric point | 4.86761474609 |
Runs | 7 |
Runs residual | 0.0173404255319 |
Runs probability | 0.0369823605117 |
Amino acid sequence | MAGPCREQGPLTGGQWSPSCSQEAGKRGWDPSLQLGQQCCELSVLSL |
Secondary structure | LLLLLLLLLLLLLLLLLLLLHHHHLLLLLLHHHLLLLEEEEEEEEEL |
PRMN | - |
PiMo | - |