Difference between revisions of "NONHSAT055926"
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sequence = <dnaseq>GACAGTGAGACCAAGGGCTTGCTTCGGGGGCTGCCGGCCAAGGCGGCGGCTGGTGGTGGTTTCTGGCTTCGCTGTTCCATTCCCTTGTCTTGAGGTCTCAGCCGGTTCTCGCTGAGATGGCTACGTCAGTGAGGCCAGTCACTCCCGGTGCCGCTGCCTTGGCAGAGCTGGTTTAGAACCaccgtgaaggtcatcgaacggggccctccaccctgcaattggcctgcggccatccttgaggccatgtggtctttgcatgagcacccaggatgcccttcaggagcaagatggcagccggcatgtaccttctggatttccttctctgccaggggcctgctctagtgttttcagctgctcctccttgaatgccacctccacttcttccttttgtgacatgaacaggttgcttcatgtctctgatatggaatgagatgcccGTGTTTTGAGGCTATTGGGAGGACTGACCATCTAGCAGCACATTGTAGACAGCCATAGGGGGGTGCCCGGCACACGAGAATGCCCCCCCGGGACGGGTCTCACTGGCTTTGGGGGCTGTCACCCCCGTGCACCGTCACTAGCACCCCCAACACCTTTTGGGTGTCTGTCCTAGGGTGTCTGCGGTGTGTGCCC</dnaseq>| | sequence = <dnaseq>GACAGTGAGACCAAGGGCTTGCTTCGGGGGCTGCCGGCCAAGGCGGCGGCTGGTGGTGGTTTCTGGCTTCGCTGTTCCATTCCCTTGTCTTGAGGTCTCAGCCGGTTCTCGCTGAGATGGCTACGTCAGTGAGGCCAGTCACTCCCGGTGCCGCTGCCTTGGCAGAGCTGGTTTAGAACCaccgtgaaggtcatcgaacggggccctccaccctgcaattggcctgcggccatccttgaggccatgtggtctttgcatgagcacccaggatgcccttcaggagcaagatggcagccggcatgtaccttctggatttccttctctgccaggggcctgctctagtgttttcagctgctcctccttgaatgccacctccacttcttccttttgtgacatgaacaggttgcttcatgtctctgatatggaatgagatgcccGTGTTTTGAGGCTATTGGGAGGACTGACCATCTAGCAGCACATTGTAGACAGCCATAGGGGGGTGCCCGGCACACGAGAATGCCCCCCCGGGACGGGTCTCACTGGCTTTGGGGGCTGTCACCCCCGTGCACCGTCACTAGCACCCCCAACACCTTTTGGGTGTCTGTCCTAGGGTGTCTGCGGTGTGTGCCC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:NONHSAG022772]][[Category:Transcripts]] | + | [[Category:Intergenic]][[Category:NONHSAG022772]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 22:27, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT055926 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
630 nt |
| Genomic location |
chr17-:73634626..73636042 |
| Exon number |
3 |
| Exons |
73634626..73634983,73635102..73635279,73635949..73636042 |
| Genome context |
|
| Sequence |
000001 GACAGTGAGA CCAAGGGCTT GCTTCGGGGG CTGCCGGCCA AGGCGGCGGC TGGTGGTGGT TTCTGGCTTC GCTGTTCCAT 000080
000081 TCCCTTGTCT TGAGGTCTCA GCCGGTTCTC GCTGAGATGG CTACGTCAGT GAGGCCAGTC ACTCCCGGTG CCGCTGCCTT 000160 000161 GGCAGAGCTG GTTTAGAACC accgtgaagg tcatcgaacg gggccctcca ccctgcaatt ggcctgcggc catccttgag 000240 000241 gccatgtggt ctttgcatga gcacccagga tgcccttcag gagcaagatg gcagccggca tgtaccttct ggatttcctt 000320 000321 ctctgccagg ggcctgctct agtgttttca gctgctcctc cttgaatgcc acctccactt cttccttttg tgacatgaac 000400 000401 aggttgcttc atgtctctga tatggaatga gatgcccGTG TTTTGAGGCT ATTGGGAGGA CTGACCATCT AGCAGCACAT 000480 000481 TGTAGACAGC CATAGGGGGG TGCCCGGCAC ACGAGAATGC CCCCCCGGGA CGGGTCTCAC TGGCTTTGGG GGCTGTCACC 000560 000561 CCCGTGCACC GTCACTAGCA CCCCCAACAC CTTTTGGGTG TCTGTCCTAG GGTGTCTGCG GTGTGTGCCC |
Predicted Small Protein
| Name | NONHSAT055926_smProtein_269:364 |
| Length | 32 |
| Molecular weight | 3344.0419 |
| Aromaticity | 0.129032258065 |
| Instability index | 80.1483870968 |
| Isoelectric point | 7.95343017578 |
| Runs | 5 |
| Runs residual | 0.0399865591398 |
| Runs probability | 0.0487546369901 |
| Amino acid sequence | MPFRSKMAAGMYLLDFLLCQGPALVFSAAPP |
| Secondary structure | LLHHHHHHHHHHHHHHHHHLLLLLEELLLLL |
| PRMN | - |
| PiMo | - |
