Difference between revisions of "NONHSAT063996"

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sequence = <dnaseq>GTAGTCCGGCCGCCCTGTGACTAACGGCTGGAACCGCCTAAGACACCACCCCAGCCAGCATGGCCGGCAGGAGCGCACCGCGCTGTCTCCCTCCAGGGATCCGCACCGCCCTACAATCCTGCTTTGTGCTGAGATTGTAGTCCTGCAGGCGTACAACTAACAAGCTGGGTGCAGATAAGAGACTACAGCTCCCCGCATCCCAAGCAAAGGTCCCTCCTCTACGGAGCCCCTCCACGCGTCCACTGCGGTTCCGCCGTGCCAAGGGGAGCTTGGCTGTTCACGGGCCTCACCTGCTAGCGAGAAGATAGCTTGGCCGGGCGGCTGATCTCACCTTGTAATTCTGACACTGTGTCTCCCGGGCTTGTCGGCTTCATGACTTGTGCCCAAAGTTTGATTTCTCGCAGACCAGGAGGACCCATTGGACCCCCGGGCTGGCTGCAGGGCCCACACCTGGGTTAGACCTCGCACAGGGACGCTGCTGCCACTGTAATAAAGCGTGCCTACACGCTTCTGAAACTGGTGTAGGAACAACCTCAGTTCTGTGAAAGGCGGACGCAGCAGGACAGAATCTCCGTGGACATCTGTCTGGAGGAGCAATTTTACTGCGACATTTTAAAGAAACAAATTTAATTGATTTCCAAGTTATTTGAGACAGAGTCTCGCTCTGTCACCAGGCTGTACAGTGCCGTGGCCTGTCTCGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTTATGCCTCAGCCTCCCAAGTATCTGGGACTACAGGCATGCGCCACCACGCCCAGCTGATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGACCAGGATGGTCTCAATCTCTTGACCTCGTTATCCGGCTGCCTCCTCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCTGGCCACATCTACTTTTTTAAATGTGTCATTATATTTGTGATATTGTCATGATGTTTTCTACTTATATTTTATTCAAAAATTTTATACTTTAAGTTCTTACCTTTAGGTCTTTGATGCATTTTTATTTGTTTATGGTGTAGGGTAAATGTTCAACTTCATCCTTTTGCTTGTGGATATCCATTTTTTCCCAGCACCAATTGTTATAAAGACAGTCCTTTGCCCATTGAACGGTCTTTGTATCCCCATCAAAAATTATTTGACCATATGCTGCTTTATACTGTTCCAGTGTCCATATGTGTGTCTCTTTGCCAGTACCACACTATTTTGGAACTTTGTATTAAGCTTTGGAATGAATAAGTGTACATTTTGTAACACTGGACTTCTTTTTCAAGATAATTTTGACTCATTGGGGTCCCTTGAGATTCCATATGAAATTTAGGTAGGATTTTTCTATTTCTGCAAAATAGAATTTTTTGCTTTTTTTGTTACTCCCGACGTATTTTATTCTTTTCAGTGCTATTGTAAATGTGCTTGTTTGCTTAGTTTTGTTTTCTAATTATTCATCATTACTGTATAGAAACACAAGTGATATTTGCATGTTAATTTTGTATGCTGCTACTATGCTGAATTTATTAGTTGTAATACTTTTTGTGTGGATCTGTGAAATCTCTAGAGCTTTCCACATAAAATTATATTATCTGTAGGCTAGAGTAATTTTACCTCTACATTTCCAATTTGGATAGTTTGTTTCTTTTTAATTCTTAATTTGACTAGAACTTCCAACACTATGTGGAATAGAAATAGCAAAAGCAGACACCTTTGCCTTGTTCCTGAGCTTAGAGCAGAAGCTTTTTGTCTTTCACCCTGGAGTACATTGTTTGATGTGGTTTTTTAATGTGTGGATTTCACAATGGTAGTATTTTAGTTTTAAAATTCCTACTTTTTTGAGTGTTTTCACCCTGAAAAGATTTTGAATTTCATAAAATACTTTTCTCTGCATCCATGAGGTGATCAATGTTTCTTTTATTTTGTTAATGTGTACACATTGATCAATTTTTATATGTTAAAAAATTCATGTTTTAAGATATCCTTGCATTCTAAGAATAAATTGCACTTGGTCGTGGTG</dnaseq>|
 
sequence = <dnaseq>GTAGTCCGGCCGCCCTGTGACTAACGGCTGGAACCGCCTAAGACACCACCCCAGCCAGCATGGCCGGCAGGAGCGCACCGCGCTGTCTCCCTCCAGGGATCCGCACCGCCCTACAATCCTGCTTTGTGCTGAGATTGTAGTCCTGCAGGCGTACAACTAACAAGCTGGGTGCAGATAAGAGACTACAGCTCCCCGCATCCCAAGCAAAGGTCCCTCCTCTACGGAGCCCCTCCACGCGTCCACTGCGGTTCCGCCGTGCCAAGGGGAGCTTGGCTGTTCACGGGCCTCACCTGCTAGCGAGAAGATAGCTTGGCCGGGCGGCTGATCTCACCTTGTAATTCTGACACTGTGTCTCCCGGGCTTGTCGGCTTCATGACTTGTGCCCAAAGTTTGATTTCTCGCAGACCAGGAGGACCCATTGGACCCCCGGGCTGGCTGCAGGGCCCACACCTGGGTTAGACCTCGCACAGGGACGCTGCTGCCACTGTAATAAAGCGTGCCTACACGCTTCTGAAACTGGTGTAGGAACAACCTCAGTTCTGTGAAAGGCGGACGCAGCAGGACAGAATCTCCGTGGACATCTGTCTGGAGGAGCAATTTTACTGCGACATTTTAAAGAAACAAATTTAATTGATTTCCAAGTTATTTGAGACAGAGTCTCGCTCTGTCACCAGGCTGTACAGTGCCGTGGCCTGTCTCGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTTATGCCTCAGCCTCCCAAGTATCTGGGACTACAGGCATGCGCCACCACGCCCAGCTGATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGACCAGGATGGTCTCAATCTCTTGACCTCGTTATCCGGCTGCCTCCTCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCTGGCCACATCTACTTTTTTAAATGTGTCATTATATTTGTGATATTGTCATGATGTTTTCTACTTATATTTTATTCAAAAATTTTATACTTTAAGTTCTTACCTTTAGGTCTTTGATGCATTTTTATTTGTTTATGGTGTAGGGTAAATGTTCAACTTCATCCTTTTGCTTGTGGATATCCATTTTTTCCCAGCACCAATTGTTATAAAGACAGTCCTTTGCCCATTGAACGGTCTTTGTATCCCCATCAAAAATTATTTGACCATATGCTGCTTTATACTGTTCCAGTGTCCATATGTGTGTCTCTTTGCCAGTACCACACTATTTTGGAACTTTGTATTAAGCTTTGGAATGAATAAGTGTACATTTTGTAACACTGGACTTCTTTTTCAAGATAATTTTGACTCATTGGGGTCCCTTGAGATTCCATATGAAATTTAGGTAGGATTTTTCTATTTCTGCAAAATAGAATTTTTTGCTTTTTTTGTTACTCCCGACGTATTTTATTCTTTTCAGTGCTATTGTAAATGTGCTTGTTTGCTTAGTTTTGTTTTCTAATTATTCATCATTACTGTATAGAAACACAAGTGATATTTGCATGTTAATTTTGTATGCTGCTACTATGCTGAATTTATTAGTTGTAATACTTTTTGTGTGGATCTGTGAAATCTCTAGAGCTTTCCACATAAAATTATATTATCTGTAGGCTAGAGTAATTTTACCTCTACATTTCCAATTTGGATAGTTTGTTTCTTTTTAATTCTTAATTTGACTAGAACTTCCAACACTATGTGGAATAGAAATAGCAAAAGCAGACACCTTTGCCTTGTTCCTGAGCTTAGAGCAGAAGCTTTTTGTCTTTCACCCTGGAGTACATTGTTTGATGTGGTTTTTTAATGTGTGGATTTCACAATGGTAGTATTTTAGTTTTAAAATTCCTACTTTTTTGAGTGTTTTCACCCTGAAAAGATTTTGAATTTCATAAAATACTTTTCTCTGCATCCATGAGGTGATCAATGTTTCTTTTATTTTGTTAATGTGTACACATTGATCAATTTTTATATGTTAAAAAATTCATGTTTTAAGATATCCTTGCATTCTAAGAATAAATTGCACTTGGTCGTGGTG</dnaseq>|
 
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[[Category:Intergenic]][[Category:NONHSAG025376]]
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[[Category:Intergenic]][[Category:NONHSAG025376]][[Category:Transcripts]][[Category:Transcripts]]

Latest revision as of 22:52, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT063996

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2050 nt

Genomic location

chr19-:28281399..28284848

Exon number

3

Exons

28281399..28282809,28283908..28284140,28284440..28284848

Genome context

Sequence
000001 GTAGTCCGGC CGCCCTGTGA CTAACGGCTG GAACCGCCTA AGACACCACC CCAGCCAGCA TGGCCGGCAG GAGCGCACCG 000080
000081 CGCTGTCTCC CTCCAGGGAT CCGCACCGCC CTACAATCCT GCTTTGTGCT GAGATTGTAG TCCTGCAGGC GTACAACTAA 000160
000161 CAAGCTGGGT GCAGATAAGA GACTACAGCT CCCCGCATCC CAAGCAAAGG TCCCTCCTCT ACGGAGCCCC TCCACGCGTC 000240
000241 CACTGCGGTT CCGCCGTGCC AAGGGGAGCT TGGCTGTTCA CGGGCCTCAC CTGCTAGCGA GAAGATAGCT TGGCCGGGCG 000320
000321 GCTGATCTCA CCTTGTAATT CTGACACTGT GTCTCCCGGG CTTGTCGGCT TCATGACTTG TGCCCAAAGT TTGATTTCTC 000400
000401 GCAGACCAGG AGGACCCATT GGACCCCCGG GCTGGCTGCA GGGCCCACAC CTGGGTTAGA CCTCGCACAG GGACGCTGCT 000480
000481 GCCACTGTAA TAAAGCGTGC CTACACGCTT CTGAAACTGG TGTAGGAACA ACCTCAGTTC TGTGAAAGGC GGACGCAGCA 000560
000561 GGACAGAATC TCCGTGGACA TCTGTCTGGA GGAGCAATTT TACTGCGACA TTTTAAAGAA ACAAATTTAA TTGATTTCCA 000640
000641 AGTTATTTGA GACAGAGTCT CGCTCTGTCA CCAGGCTGTA CAGTGCCGTG GCCTGTCTCG GCTCACTGCA ACCTCCACCT 000720
000721 CCTGGGTTCA AGCGATTCTT ATGCCTCAGC CTCCCAAGTA TCTGGGACTA CAGGCATGCG CCACCACGCC CAGCTGATTT 000800
000801 TTGTATTTTT AGTAGAGACG GGGTTTCACC ATGTTGACCA GGATGGTCTC AATCTCTTGA CCTCGTTATC CGGCTGCCTC 000880
000881 CTCCTCCCAA AGTGCTGGGA TTACAGGCGT GAGCCACCAT GCCTGGCCAC ATCTACTTTT TTAAATGTGT CATTATATTT 000960
000961 GTGATATTGT CATGATGTTT TCTACTTATA TTTTATTCAA AAATTTTATA CTTTAAGTTC TTACCTTTAG GTCTTTGATG 001040
001041 CATTTTTATT TGTTTATGGT GTAGGGTAAA TGTTCAACTT CATCCTTTTG CTTGTGGATA TCCATTTTTT CCCAGCACCA 001120
001121 ATTGTTATAA AGACAGTCCT TTGCCCATTG AACGGTCTTT GTATCCCCAT CAAAAATTAT TTGACCATAT GCTGCTTTAT 001200
001201 ACTGTTCCAG TGTCCATATG TGTGTCTCTT TGCCAGTACC ACACTATTTT GGAACTTTGT ATTAAGCTTT GGAATGAATA 001280
001281 AGTGTACATT TTGTAACACT GGACTTCTTT TTCAAGATAA TTTTGACTCA TTGGGGTCCC TTGAGATTCC ATATGAAATT 001360
001361 TAGGTAGGAT TTTTCTATTT CTGCAAAATA GAATTTTTTG CTTTTTTTGT TACTCCCGAC GTATTTTATT CTTTTCAGTG 001440
001441 CTATTGTAAA TGTGCTTGTT TGCTTAGTTT TGTTTTCTAA TTATTCATCA TTACTGTATA GAAACACAAG TGATATTTGC 001520
001521 ATGTTAATTT TGTATGCTGC TACTATGCTG AATTTATTAG TTGTAATACT TTTTGTGTGG ATCTGTGAAA TCTCTAGAGC 001600
001601 TTTCCACATA AAATTATATT ATCTGTAGGC TAGAGTAATT TTACCTCTAC ATTTCCAATT TGGATAGTTT GTTTCTTTTT 001680
001681 AATTCTTAAT TTGACTAGAA CTTCCAACAC TATGTGGAAT AGAAATAGCA AAAGCAGACA CCTTTGCCTT GTTCCTGAGC 001760
001761 TTAGAGCAGA AGCTTTTTGT CTTTCACCCT GGAGTACATT GTTTGATGTG GTTTTTTAAT GTGTGGATTT CACAATGGTA 001840
001841 GTATTTTAGT TTTAAAATTC CTACTTTTTT GAGTGTTTTC ACCCTGAAAA GATTTTGAAT TTCATAAAAT ACTTTTCTCT 001920
001921 GCATCCATGA GGTGATCAAT GTTTCTTTTA TTTTGTTAAT GTGTACACAT TGATCAATTT TTATATGTTA AAAAATTCAT 002000
002001 GTTTTAAGAT ATCCTTGCAT TCTAAGAATA AATTGCACTT GGTCGTGGTG
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