Difference between revisions of "NONHSAT064206"
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==Annotated Information==
===Transcriptomic Nomeclature===
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sequence = <dnaseq>attacaggcatgagccactgcacccagcctgtggcattttaggctttagatttttggattggagatactcaacctgTTATAAATAGGTACTAGCTGTGTTTCTTTAAGCAAATTCAGTGCTTCAGTTTCTAAATTTTGTAAATCTGAGAATAGAAAGATTGTGTCTGTGCTGTAATTTTAAAATAATCTTTACAACTGTTTTTGAAGTTTTTAGATGTTTATCTTTTTATCTACAGGGAACTCAAAACTGTATGATCTACCAGATGAGCCTTTTACAAGACAGTTTTACTTTGTCCACTCAGCTGGTCAGTTTAAGGGAAAGACTTCAAGGGAGATTATGGCAAGAGATAGAAGTGTCCCTAATTTAACCGAAGGTTCTTTGCATGAGCCAGGGAGGCAAAGTGTCACACTGAGACAGAATAACCTGCCAGCTCAGAGT</dnaseq>| | sequence = <dnaseq>attacaggcatgagccactgcacccagcctgtggcattttaggctttagatttttggattggagatactcaacctgTTATAAATAGGTACTAGCTGTGTTTCTTTAAGCAAATTCAGTGCTTCAGTTTCTAAATTTTGTAAATCTGAGAATAGAAAGATTGTGTCTGTGCTGTAATTTTAAAATAATCTTTACAACTGTTTTTGAAGTTTTTAGATGTTTATCTTTTTATCTACAGGGAACTCAAAACTGTATGATCTACCAGATGAGCCTTTTACAAGACAGTTTTACTTTGTCCACTCAGCTGGTCAGTTTAAGGGAAAGACTTCAAGGGAGATTATGGCAAGAGATAGAAGTGTCCCTAATTTAACCGAAGGTTCTTTGCATGAGCCAGGGAGGCAAAGTGTCACACTGAGACAGAATAACCTGCCAGCTCAGAGT</dnaseq>| | ||
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− | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG025461]][[Category:Transcripts]] |
Latest revision as of 22:52, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT064206 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
439 nt |
Genomic location |
chr19-:33089234..33091192 |
Exon number |
3 |
Exons |
33089234..33089284,33090610..33090682,33090878..33091192 |
Genome context |
|
Sequence |
000001 attacaggca tgagccactg cacccagcct gtggcatttt aggctttaga tttttggatt ggagatactc aacctgTTAT 000080
000081 AAATAGGTAC TAGCTGTGTT TCTTTAAGCA AATTCAGTGC TTCAGTTTCT AAATTTTGTA AATCTGAGAA TAGAAAGATT 000160 000161 GTGTCTGTGC TGTAATTTTA AAATAATCTT TACAACTGTT TTTGAAGTTT TTAGATGTTT ATCTTTTTAT CTACAGGGAA 000240 000241 CTCAAAACTG TATGATCTAC CAGATGAGCC TTTTACAAGA CAGTTTTACT TTGTCCACTC AGCTGGTCAG TTTAAGGGAA 000320 000321 AGACTTCAAG GGAGATTATG GCAAGAGATA GAAGTGTCCC TAATTTAACC GAAGGTTCTT TGCATGAGCC AGGGAGGCAA 000400 000401 AGTGTCACAC TGAGACAGAA TAACCTGCCA GCTCAGAGT |
Predicted Small Protein
Name | NONHSAT064206_smProtein_251:367 |
Length | 39 |
Molecular weight | 4526.2379 |
Aromaticity | 0.0789473684211 |
Instability index | 79.6105263158 |
Isoelectric point | 4.86785888672 |
Runs | 6 |
Runs residual | 0.014716066482 |
Runs probability | 0.0057704763587 |
Amino acid sequence | MIYQMSLLQDSFTLSTQLVSLRERLQGRLWQEIEVSLI |
Secondary structure | LEEEEHHHHLLHHHHHHHHHHHHHHHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |