Difference between revisions of "NONHSAT068035"
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sequence = <dnaseq>gtcgatcacttgagcccaggagttcaagaccagcctgggcaacatagtgagagacccccaccaatatgtacaaaacaaacaaaCCCAAAACAACTGAAGAAACAGCTACAGCATAAAAAGTCATCATCATAACTAGTTTGTGGAGAAATGGCTTCAGGTGAtcccttcctgctccctcaccccaggtccaatctataccagttcctgttgacgtcatctactgaatctcatcacgtccccccatccgctatgccaccagtcctgcttagagtcaacgtcatcccATTTTGCCGATAAGCATTTTGCTGATCTTCAATTTTAGCCTGCTGGGTGTGGAGGATtccaacccaattaacagacaaggaagctgaaggagcaggagtgtctacactctagctgtcaggatgctatgggatacagcagagaataaaagggacaaagcctcgactttcatggatcttacatcctggtgcgggagccagatagcaaTTCTCTTTCCAGAGTGATGCGCAAACAAACCCTCAGATGCAAGGTGAAAGCCTGAAGCTTAGAGACAAATATTTAGTTGCATCTA</dnaseq>| | sequence = <dnaseq>gtcgatcacttgagcccaggagttcaagaccagcctgggcaacatagtgagagacccccaccaatatgtacaaaacaaacaaaCCCAAAACAACTGAAGAAACAGCTACAGCATAAAAAGTCATCATCATAACTAGTTTGTGGAGAAATGGCTTCAGGTGAtcccttcctgctccctcaccccaggtccaatctataccagttcctgttgacgtcatctactgaatctcatcacgtccccccatccgctatgccaccagtcctgcttagagtcaacgtcatcccATTTTGCCGATAAGCATTTTGCTGATCTTCAATTTTAGCCTGCTGGGTGTGGAGGATtccaacccaattaacagacaaggaagctgaaggagcaggagtgtctacactctagctgtcaggatgctatgggatacagcagagaataaaagggacaaagcctcgactttcatggatcttacatcctggtgcgggagccagatagcaaTTCTCTTTCCAGAGTGATGCGCAAACAAACCCTCAGATGCAAGGTGAAAGCCTGAAGCTTAGAGACAAATATTTAGTTGCATCTA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:NONHSAG026581]][[Category:Transcripts]] | + | [[Category:Intergenic]][[Category:NONHSAG026581]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 23:06, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT068035 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
574 nt |
| Genomic location |
chr19+:55920919..55937903 |
| Exon number |
3 |
| Exons |
55920919..55921300,55921579..55921685,55937819..55937903 |
| Genome context |
|
| Sequence |
000001 gtcgatcact tgagcccagg agttcaagac cagcctgggc aacatagtga gagaccccca ccaatatgta caaaacaaac 000080
000081 aaaCCCAAAA CAACTGAAGA AACAGCTACA GCATAAAAAG TCATCATCAT AACTAGTTTG TGGAGAAATG GCTTCAGGTG 000160 000161 Atcccttcct gctccctcac cccaggtcca atctatacca gttcctgttg acgtcatcta ctgaatctca tcacgtcccc 000240 000241 ccatccgcta tgccaccagt cctgcttaga gtcaacgtca tcccATTTTG CCGATAAGCA TTTTGCTGAT CTTCAATTTT 000320 000321 AGCCTGCTGG GTGTGGAGGA Ttccaaccca attaacagac aaggaagctg aaggagcagg agtgtctaca ctctagctgt 000400 000401 caggatgcta tgggatacag cagagaataa aagggacaaa gcctcgactt tcatggatct tacatcctgg tgcgggagcc 000480 000481 agatagcaaT TCTCTTTCCA GAGTGATGCG CAAACAAACC CTCAGATGCA AGGTGAAAGC CTGAAGCTTA GAGACAAATA 000560 000561 TTTAGTTGCA TCTA |
Predicted Small Protein
| Name | NONHSAT068035_smProtein_404:505 |
| Length | 34 |
| Molecular weight | 3806.3017 |
| Aromaticity | 0.121212121212 |
| Instability index | 53.3151515152 |
| Isoelectric point | 4.62457275391 |
| Runs | 5 |
| Runs residual | 0.0326086956522 |
| Runs probability | 0.0268327150681 |
| Amino acid sequence | MLWDTAENKRDKASTFMDLTSWCGSQIAILFPE |
| Secondary structure | LLLLHHHHHHHHHHHHHHHHHHHHLLEEEEELL |
| PRMN | - |
| PiMo | - |
