Difference between revisions of "NONHSAT069528"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>TGGGAGACTCAAAACCCTGTTCAACTCTCTCTGGGCTAGCTGCTCCCCTCCCCAAGAGGATTTCTCTCCAGAGCTGGTATCATCGCTTAATGATGTTCCACCAACAAGGGGAAGATTCAGCCATGTCTTCCTAGGATCCAGCATCCAAACCTGGACCAAAGTCCTCGGATCCTCAGCAATGGGGGTGCATCTGGTGATGGTGTTCATGCTAAATTTGTGCCAAGAGACACCTGTACTTGTGGGAGAATTAATATTTCACTTCTGTTTAGGTTTCTTTTCTGGGAGCTGCTATCACTGAATACATAAAGAAATTGAGCCTATATGATTTCAATCTTCACCTTCTGATGCTGATGAAACAGGATTCTATGCAGAGAAAATCCTCTCCAGTCAAGTAATTGCATCCATTTCATCTTCCCAGCCCTCCTCTAGATGGGAGGTGGAGGTGTGTGTACCAATCTCTTAATTCAGAAATGAGACAAGAGGAGGAAAAAGGAGTTCCGGAGGTGTGTGATCCAAGTCTGGCTGCAGGCTATGGACATTCCAGGAGGGAGACTCCATCAGAGAAGTGGAGCTGGAGTTGGGTGTTAGAGGGTAAAGGGAGGGTTTGAACAGGCAAGGGATGGGGGAGGAGTGCCTTACAGTGGGAGAGGGAGAGGCTGCTTGAAAAAGCATAGAGCTGTGAGTGAGCATGCGTGCCCAAGGAGAGGGAGCCAGGCACTGCCAGGGTGCAGGTGGGGCAGACTGGCTAGGTGTGTGGCCAGGGTGTGGAAGG</dnaseq>| | sequence = <dnaseq>TGGGAGACTCAAAACCCTGTTCAACTCTCTCTGGGCTAGCTGCTCCCCTCCCCAAGAGGATTTCTCTCCAGAGCTGGTATCATCGCTTAATGATGTTCCACCAACAAGGGGAAGATTCAGCCATGTCTTCCTAGGATCCAGCATCCAAACCTGGACCAAAGTCCTCGGATCCTCAGCAATGGGGGTGCATCTGGTGATGGTGTTCATGCTAAATTTGTGCCAAGAGACACCTGTACTTGTGGGAGAATTAATATTTCACTTCTGTTTAGGTTTCTTTTCTGGGAGCTGCTATCACTGAATACATAAAGAAATTGAGCCTATATGATTTCAATCTTCACCTTCTGATGCTGATGAAACAGGATTCTATGCAGAGAAAATCCTCTCCAGTCAAGTAATTGCATCCATTTCATCTTCCCAGCCCTCCTCTAGATGGGAGGTGGAGGTGTGTGTACCAATCTCTTAATTCAGAAATGAGACAAGAGGAGGAAAAAGGAGTTCCGGAGGTGTGTGATCCAAGTCTGGCTGCAGGCTATGGACATTCCAGGAGGGAGACTCCATCAGAGAAGTGGAGCTGGAGTTGGGTGTTAGAGGGTAAAGGGAGGGTTTGAACAGGCAAGGGATGGGGGAGGAGTGCCTTACAGTGGGAGAGGGAGAGGCTGCTTGAAAAAGCATAGAGCTGTGAGTGAGCATGCGTGCCCAAGGAGAGGGAGCCAGGCACTGCCAGGGTGCAGGTGGGGCAGACTGGCTAGGTGTGTGGCCAGGGTGTGGAAGG</dnaseq>| | ||
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− | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG027204]][[Category:Transcripts]] |
Latest revision as of 23:13, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT069528 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
772 nt |
Genomic location |
chr2-:23250409..23421793 |
Exon number |
3 |
Exons |
23250409..23250809,23313618..23313874,23421680..23421793 |
Genome context |
|
Sequence |
000001 TGGGAGACTC AAAACCCTGT TCAACTCTCT CTGGGCTAGC TGCTCCCCTC CCCAAGAGGA TTTCTCTCCA GAGCTGGTAT 000080
000081 CATCGCTTAA TGATGTTCCA CCAACAAGGG GAAGATTCAG CCATGTCTTC CTAGGATCCA GCATCCAAAC CTGGACCAAA 000160 000161 GTCCTCGGAT CCTCAGCAAT GGGGGTGCAT CTGGTGATGG TGTTCATGCT AAATTTGTGC CAAGAGACAC CTGTACTTGT 000240 000241 GGGAGAATTA ATATTTCACT TCTGTTTAGG TTTCTTTTCT GGGAGCTGCT ATCACTGAAT ACATAAAGAA ATTGAGCCTA 000320 000321 TATGATTTCA ATCTTCACCT TCTGATGCTG ATGAAACAGG ATTCTATGCA GAGAAAATCC TCTCCAGTCA AGTAATTGCA 000400 000401 TCCATTTCAT CTTCCCAGCC CTCCTCTAGA TGGGAGGTGG AGGTGTGTGT ACCAATCTCT TAATTCAGAA ATGAGACAAG 000480 000481 AGGAGGAAAA AGGAGTTCCG GAGGTGTGTG ATCCAAGTCT GGCTGCAGGC TATGGACATT CCAGGAGGGA GACTCCATCA 000560 000561 GAGAAGTGGA GCTGGAGTTG GGTGTTAGAG GGTAAAGGGA GGGTTTGAAC AGGCAAGGGA TGGGGGAGGA GTGCCTTACA 000640 000641 GTGGGAGAGG GAGAGGCTGC TTGAAAAAGC ATAGAGCTGT GAGTGAGCAT GCGTGCCCAA GGAGAGGGAG CCAGGCACTG 000720 000721 CCAGGGTGCA GGTGGGGCAG ACTGGCTAGG TGTGTGGCCA GGGTGTGGAA GG |
Predicted Small Protein
Name | NONHSAT069528_smProtein_470:607 |
Length | 46 |
Molecular weight | 5145.6582 |
Aromaticity | 0.0888888888889 |
Instability index | 62.1022222222 |
Isoelectric point | 5.70599365234 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.0439473086532 |
Amino acid sequence | MRQEEEKGVPEVCDPSLAAGYGHSRRETPSEKWSWSWVLEGKGRV |
Secondary structure | LLLHHHLLLLEELLLLLLLLLLLLLLLLLLLLLEEEEEEELLLLL |
PRMN | - |
PiMo | - |