Difference between revisions of "NONHSAT069547"
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sequence = <dnaseq>ATTGTGTTCACCTGACTTGAGATTGGGAAGTATAGCCTTGTTAAAGCTTTGCTAAACAGGACTTCTTCTTATGACTTCAACCACATCCTGTGGTAGATGTCACATTATGGGGCTCAAAAAGTCATAGAAAAAAGTCTTCAGTTCTCCTCTGTTTTAGTCACACTCTTTGTGCTATGGAAGTGCTTCCTCTTGCACTACCTTCTCCACCTCGTCAATTATCAGAATCAGAAAAAAGTCGAATGGAGGACCAGGAGGAAAATACTTTAAGAGAGTTGCGGTTGTTTCTCAGGGATGTAACCAAGAGGCTGGCCACAGATAAACGCTTTAACATCTTCAGCAAACCGGTGGATATTGAAGAGGTCTTGTTTCAGTAGTGTGCAAACAGTGAAGTTGAACTGGCTAAAAGAAAAAAATATTGACATCTTTTTTTGGAAGGAAAAAAAAGCAAAGGCATGGATGAATATTACCCCTAGCCTATAAAATTTTAATCCATGTGATAACTACCGATGTCATCAGCAAACATCTGGTGACTTTTGGATGAAATTAGCGACCAATTTATATTGGCCTCTTAATTATTATTAACCTTTGTGGTCTCTTACTCTTCGATTTAAGAGGATTAAAGGTTGCCTTA</dnaseq>| | sequence = <dnaseq>ATTGTGTTCACCTGACTTGAGATTGGGAAGTATAGCCTTGTTAAAGCTTTGCTAAACAGGACTTCTTCTTATGACTTCAACCACATCCTGTGGTAGATGTCACATTATGGGGCTCAAAAAGTCATAGAAAAAAGTCTTCAGTTCTCCTCTGTTTTAGTCACACTCTTTGTGCTATGGAAGTGCTTCCTCTTGCACTACCTTCTCCACCTCGTCAATTATCAGAATCAGAAAAAAGTCGAATGGAGGACCAGGAGGAAAATACTTTAAGAGAGTTGCGGTTGTTTCTCAGGGATGTAACCAAGAGGCTGGCCACAGATAAACGCTTTAACATCTTCAGCAAACCGGTGGATATTGAAGAGGTCTTGTTTCAGTAGTGTGCAAACAGTGAAGTTGAACTGGCTAAAAGAAAAAAATATTGACATCTTTTTTTGGAAGGAAAAAAAAGCAAAGGCATGGATGAATATTACCCCTAGCCTATAAAATTTTAATCCATGTGATAACTACCGATGTCATCAGCAAACATCTGGTGACTTTTGGATGAAATTAGCGACCAATTTATATTGGCCTCTTAATTATTATTAACCTTTGTGGTCTCTTACTCTTCGATTTAAGAGGATTAAAGGTTGCCTTA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Sense]][[Category:NONHSAG027219]] | + | [[Category:Sense]][[Category:NONHSAG027219]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 23:13, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT069547 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
631 nt |
Genomic location |
chr2-:24008625..24011233 |
Exon number |
2 |
Exons |
24008625..24009093,24011072..24011233 |
Genome context |
|
Sequence |
000001 ATTGTGTTCA CCTGACTTGA GATTGGGAAG TATAGCCTTG TTAAAGCTTT GCTAAACAGG ACTTCTTCTT ATGACTTCAA 000080
000081 CCACATCCTG TGGTAGATGT CACATTATGG GGCTCAAAAA GTCATAGAAA AAAGTCTTCA GTTCTCCTCT GTTTTAGTCA 000160 000161 CACTCTTTGT GCTATGGAAG TGCTTCCTCT TGCACTACCT TCTCCACCTC GTCAATTATC AGAATCAGAA AAAAGTCGAA 000240 000241 TGGAGGACCA GGAGGAAAAT ACTTTAAGAG AGTTGCGGTT GTTTCTCAGG GATGTAACCA AGAGGCTGGC CACAGATAAA 000320 000321 CGCTTTAACA TCTTCAGCAA ACCGGTGGAT ATTGAAGAGG TCTTGTTTCA GTAGTGTGCA AACAGTGAAG TTGAACTGGC 000400 000401 TAAAAGAAAA AAATATTGAC ATCTTTTTTT GGAAGGAAAA AAAAGCAAAG GCATGGATGA ATATTACCCC TAGCCTATAA 000480 000481 AATTTTAATC CATGTGATAA CTACCGATGT CATCAGCAAA CATCTGGTGA CTTTTGGATG AAATTAGCGA CCAATTTATA 000560 000561 TTGGCCTCTT AATTATTATT AACCTTTGTG GTCTCTTACT CTTCGATTTA AGAGGATTAA AGGTTGCCTT A |
Predicted Small Protein
Name | NONHSAT069547_smProtein_173:373 |
Length | 67 |
Molecular weight | 7830.9052 |
Aromaticity | 0.0606060606061 |
Instability index | 84.9303030303 |
Isoelectric point | 5.09710693359 |
Runs | 11 |
Runs residual | 0.0160587915079 |
Runs probability | 0.0232692585634 |
Amino acid sequence | MEVLPLALPSPPRQLSESEKSRMEDQEENTLRELRLFLRDVTKRLATDKRFNIFSKPVDI EEVLFQ |
Secondary structure | LEEELLLLLLLLLLLLHHHHLLHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLEEELLLLH HHHHLL |
PRMN | - |
PiMo | - |