Difference between revisions of "NONHSAT070366"
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sequence = <dnaseq>GAAGGGGAGGAAGTGAAGATCTTCAGACTAAGATGGATGAAGCTGAATTCAGATCTCAGCTCCAAGGTGAATGAGCAAACAGCACAGAAAAAGAAACAGCAGTATATGTGGAAGAAAGCAAGAAAAATCAACTGGCCTGGAACCTAAGACTTGTCCAAAGATGTCACAGAGAGTAAAATGAGAAAAATCCAGTAGCCCGTGCCCAGAGCAGTTCCTCGTACCCAGCAGAAGGCTAACAAGCCCTGAGATGAATGATGCTCTTCCCAAGGAAGGCAGAGGAGGCGACAGTCCATTTGCGTTCTCTCCTCTGCAAGTACAGGATCTCGTTTGATTCTCAAAACCACCCTAGAGGAGACAGGAGGCACCTGAGGCCCAGAGACGTGAAGCCACCTGTCCAAGGCCATACAGCAGATAACTTATTCTGGAGGAAGACACCTGCCATGCCGTGAGGACAGTCAAGCAGTTCTGTGGAGAGATCCATGTGGTGAGAAACAGGGGCCTCCTGTCAACAGGAAGAACAACCTGGCAGGCCTGTCTTGGATTCAGAGCCTCCAGCCCCAGTCGAGCCTTCAGATAACTGCACCCTTGGCTGTCATCTCAACTGCAATCTCACGACAGACCCTGAGCTGGAACTACTCTGTTTACCAATGCCTGGCCCACAGAAAGACTATGAGATAAAACAAGTATATTGTTTTTAGAAGATATGTTTTGGAGTAATTTATTATGC</dnaseq>| | sequence = <dnaseq>GAAGGGGAGGAAGTGAAGATCTTCAGACTAAGATGGATGAAGCTGAATTCAGATCTCAGCTCCAAGGTGAATGAGCAAACAGCACAGAAAAAGAAACAGCAGTATATGTGGAAGAAAGCAAGAAAAATCAACTGGCCTGGAACCTAAGACTTGTCCAAAGATGTCACAGAGAGTAAAATGAGAAAAATCCAGTAGCCCGTGCCCAGAGCAGTTCCTCGTACCCAGCAGAAGGCTAACAAGCCCTGAGATGAATGATGCTCTTCCCAAGGAAGGCAGAGGAGGCGACAGTCCATTTGCGTTCTCTCCTCTGCAAGTACAGGATCTCGTTTGATTCTCAAAACCACCCTAGAGGAGACAGGAGGCACCTGAGGCCCAGAGACGTGAAGCCACCTGTCCAAGGCCATACAGCAGATAACTTATTCTGGAGGAAGACACCTGCCATGCCGTGAGGACAGTCAAGCAGTTCTGTGGAGAGATCCATGTGGTGAGAAACAGGGGCCTCCTGTCAACAGGAAGAACAACCTGGCAGGCCTGTCTTGGATTCAGAGCCTCCAGCCCCAGTCGAGCCTTCAGATAACTGCACCCTTGGCTGTCATCTCAACTGCAATCTCACGACAGACCCTGAGCTGGAACTACTCTGTTTACCAATGCCTGGCCCACAGAAAGACTATGAGATAAAACAAGTATATTGTTTTTAGAAGATATGTTTTGGAGTAATTTATTATGC</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:NONHSAG027598]] | + | [[Category:Intergenic]][[Category:NONHSAG027598]][[Category:Transcripts]] |
Latest revision as of 23:17, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070366 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
727 nt |
Genomic location |
chr2-:43199835..43251311 |
Exon number |
4 |
Exons |
43199835..43200150,43207423..43207609,43228463..43228620,43251246..43251311 |
Genome context |
|
Sequence |
000001 GAAGGGGAGG AAGTGAAGAT CTTCAGACTA AGATGGATGA AGCTGAATTC AGATCTCAGC TCCAAGGTGA ATGAGCAAAC 000080
000081 AGCACAGAAA AAGAAACAGC AGTATATGTG GAAGAAAGCA AGAAAAATCA ACTGGCCTGG AACCTAAGAC TTGTCCAAAG 000160 000161 ATGTCACAGA GAGTAAAATG AGAAAAATCC AGTAGCCCGT GCCCAGAGCA GTTCCTCGTA CCCAGCAGAA GGCTAACAAG 000240 000241 CCCTGAGATG AATGATGCTC TTCCCAAGGA AGGCAGAGGA GGCGACAGTC CATTTGCGTT CTCTCCTCTG CAAGTACAGG 000320 000321 ATCTCGTTTG ATTCTCAAAA CCACCCTAGA GGAGACAGGA GGCACCTGAG GCCCAGAGAC GTGAAGCCAC CTGTCCAAGG 000400 000401 CCATACAGCA GATAACTTAT TCTGGAGGAA GACACCTGCC ATGCCGTGAG GACAGTCAAG CAGTTCTGTG GAGAGATCCA 000480 000481 TGTGGTGAGA AACAGGGGCC TCCTGTCAAC AGGAAGAACA ACCTGGCAGG CCTGTCTTGG ATTCAGAGCC TCCAGCCCCA 000560 000561 GTCGAGCCTT CAGATAACTG CACCCTTGGC TGTCATCTCA ACTGCAATCT CACGACAGAC CCTGAGCTGG AACTACTCTG 000640 000641 TTTACCAATG CCTGGCCCAC AGAAAGACTA TGAGATAAAA CAAGTATATT GTTTTTAGAA GATATGTTTT GGAGTAATTT 000720 000721 ATTATGC |
Predicted Small Protein
Name | NONHSAT070366_smProtein_251:448 |
Length | 66 |
Molecular weight | 7707.87 |
Aromaticity | 0.0769230769231 |
Instability index | 55.22 |
Isoelectric point | 10.8648071289 |
Runs | 7 |
Runs residual | 0.0425961538462 |
Runs probability | 0.0428621899211 |
Amino acid sequence | MMLFPRKAEEATVHLRSLLCKYRISFDSQNHPRGDRRHLRPRDVKPPVQGHTADNLFWRK TPAMP |
Secondary structure | LLLLLLHHHHHHHHHHHHHLLEEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHL LLLLL |
PRMN | - |
PiMo | - |