Difference between revisions of "NONHSAT075070"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>TCCTATGTAACAGAGGACAGATGGGAATTCATGAGAATCAAATTAGAAAGCCTAAAGTGCACTCACAGTTCCTACCATATGGTAAGTACCCAATAAATGGCCACTATTACCATATTCCTGCTCAAACAATGTCCAAACTCCTAACCCTGTTTTTTAAGATGCATTTATTTTTGCATATTATTAGATTGTGCCTATAGAACTTTTTGCTAGAGTCTTTATAGAGATGGATCCAGTGGCAAGGACAGAACAGATTTCTTCATAAGAAGATACTTTGCTAATGAGGATTTAGGAAGCAAGCACATTCACTAATGCAGAGAAATAATACGAGAGAACAAAGTTTACTCCTTTCCTCTTGATCAAACAGACATTCATCTCTTGTGTCTGCAACAGCTGGAAGTGAAGCTAGAGAAAAACTAAAAAAAAAAGTCAAAATGAATCAGCAAATCCCAAGAAGGCAGCTGCTTTCCTGCAGGCAGTTGCTTGCAGAGATCCTCTGAGTATCTCATGACCTTGACCACCCAACCACAGA</dnaseq>| | sequence = <dnaseq>TCCTATGTAACAGAGGACAGATGGGAATTCATGAGAATCAAATTAGAAAGCCTAAAGTGCACTCACAGTTCCTACCATATGGTAAGTACCCAATAAATGGCCACTATTACCATATTCCTGCTCAAACAATGTCCAAACTCCTAACCCTGTTTTTTAAGATGCATTTATTTTTGCATATTATTAGATTGTGCCTATAGAACTTTTTGCTAGAGTCTTTATAGAGATGGATCCAGTGGCAAGGACAGAACAGATTTCTTCATAAGAAGATACTTTGCTAATGAGGATTTAGGAAGCAAGCACATTCACTAATGCAGAGAAATAATACGAGAGAACAAAGTTTACTCCTTTCCTCTTGATCAAACAGACATTCATCTCTTGTGTCTGCAACAGCTGGAAGTGAAGCTAGAGAAAAACTAAAAAAAAAAGTCAAAATGAATCAGCAAATCCCAAGAAGGCAGCTGCTTTCCTGCAGGCAGTTGCTTGCAGAGATCCTCTGAGTATCTCATGACCTTGACCACCCAACCACAGA</dnaseq>| | ||
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| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG029612]][[Category:Transcripts]] |
Latest revision as of 23:37, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT075070 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
529 nt |
| Genomic location |
chr2+:158580507..158582601 |
| Exon number |
2 |
| Exons |
158580507..158580652,158582219..158582601 |
| Genome context |
|
| Sequence |
000001 TCCTATGTAA CAGAGGACAG ATGGGAATTC ATGAGAATCA AATTAGAAAG CCTAAAGTGC ACTCACAGTT CCTACCATAT 000080
000081 GGTAAGTACC CAATAAATGG CCACTATTAC CATATTCCTG CTCAAACAAT GTCCAAACTC CTAACCCTGT TTTTTAAGAT 000160 000161 GCATTTATTT TTGCATATTA TTAGATTGTG CCTATAGAAC TTTTTGCTAG AGTCTTTATA GAGATGGATC CAGTGGCAAG 000240 000241 GACAGAACAG ATTTCTTCAT AAGAAGATAC TTTGCTAATG AGGATTTAGG AAGCAAGCAC ATTCACTAAT GCAGAGAAAT 000320 000321 AATACGAGAG AACAAAGTTT ACTCCTTTCC TCTTGATCAA ACAGACATTC ATCTCTTGTG TCTGCAACAG CTGGAAGTGA 000400 000401 AGCTAGAGAA AAACTAAAAA AAAAAGTCAA AATGAATCAG CAAATCCCAA GAAGGCAGCT GCTTTCCTGC AGGCAGTTGC 000480 000481 TTGCAGAGAT CCTCTGAGTA TCTCATGACC TTGACCACCC AACCACAGA |
Predicted Small Protein
| Name | NONHSAT075070_smProtein_20:196 |
| Length | 59 |
| Molecular weight | 6964.3021 |
| Aromaticity | 0.137931034483 |
| Instability index | 60.5224137931 |
| Isoelectric point | 9.92108154297 |
| Runs | 5 |
| Runs residual | 0.0703865100417 |
| Runs probability | 0.0 |
| Amino acid sequence | MGIHENQIRKPKVHSQFLPYGKYPINGHYYHIPAQTMSKLLTLFFKMHLFLHIIRLCL |
| Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLEELLLHHHHHHHHHHHHHHHHHHHHHHHHL |
| PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHL |
| PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTo |
