Difference between revisions of "NONHSAT078088"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>ttagtttttgcttatctgggaatgttttaatttctctctttttttttaaggaaagctttgctggatatagaattcttgattgacaatctctttcagtgctttgaatgtgtcatttcatcaccttctggtctccatggtttataatgagaaatcagctgttaatcttattggggatcccttgtacctggtgagcaattttttttcttgctgccttcaagattctctccatgtgtttcactttcaacagcttgattatgatgtgtctacatgtaggtctctgagtttatcctagagtgttcctcctgcctcagcctcccaagtagctaggactacagtgcacaccaccacaggctagttttttttaaattttttagagatggggtcttgctatgttgcccaggctggtcttgaactcttggtctcaaacaatcctccctccttagcctcccaacgtgctagaattacagat</dnaseq>| | sequence = <dnaseq>ttagtttttgcttatctgggaatgttttaatttctctctttttttttaaggaaagctttgctggatatagaattcttgattgacaatctctttcagtgctttgaatgtgtcatttcatcaccttctggtctccatggtttataatgagaaatcagctgttaatcttattggggatcccttgtacctggtgagcaattttttttcttgctgccttcaagattctctccatgtgtttcactttcaacagcttgattatgatgtgtctacatgtaggtctctgagtttatcctagagtgttcctcctgcctcagcctcccaagtagctaggactacagtgcacaccaccacaggctagttttttttaaattttttagagatggggtcttgctatgttgcccaggctggtcttgaactcttggtctcaaacaatcctccctccttagcctcccaacgtgctagaattacagat</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG031092]][[Category:Transcripts]] |
Latest revision as of 23:51, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT078088 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
469 nt |
| Genomic location |
chr20+:1082709..1083886 |
| Exon number |
2 |
| Exons |
1082709..1083005,1083715..1083886 |
| Genome context |
|
| Sequence |
000001 ttagtttttg cttatctggg aatgttttaa tttctctctt tttttttaag gaaagctttg ctggatatag aattcttgat 000080
000081 tgacaatctc tttcagtgct ttgaatgtgt catttcatca ccttctggtc tccatggttt ataatgagaa atcagctgtt 000160 000161 aatcttattg gggatccctt gtacctggtg agcaattttt tttcttgctg ccttcaagat tctctccatg tgtttcactt 000240 000241 tcaacagctt gattatgatg tgtctacatg taggtctctg agtttatcct agagtgttcc tcctgcctca gcctcccaag 000320 000321 tagctaggac tacagtgcac accaccacag gctagttttt tttaaatttt ttagagatgg ggtcttgcta tgttgcccag 000400 000401 gctggtcttg aactcttggt ctcaaacaat cctccctcct tagcctccca acgtgctaga attacagat |
Predicted Small Protein
| Name | NONHSAT078088_smProtein_104:190 |
| Length | 29 |
| Molecular weight | 3468.2286 |
| Aromaticity | 0.214285714286 |
| Instability index | 42.075 |
| Isoelectric point | 7.85858154297 |
| Runs | 5 |
| Runs residual | 0.0246478873239 |
| Runs probability | 0.0490196078432 |
| Amino acid sequence | MCHFITFWSPWFIMRNQLLILLGIPCTW |
| Secondary structure | LEEEEELLLHHHHHHHHHHHHHLLLLLL |
| PRMN | LLLLLHHHHHHHHHHHHHHHHHHLLLLL |
| PiMo | oooooTTTTTTTTTTTTTTTTTTiiiii |
