Difference between revisions of "NONHSAT084348"
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sequence = <dnaseq>TGCGGGCCCTTGCGGGGGCTGGTTCCAGCAGCAACCGCCGGGCAGGGCCCCTCCCGACCGCGACCTCCTGTCCGCACCGTAGGGCAGCCGGCCGGGCCAGCCTCCCTCACAGGACTACCGAGGAAGAGGTAGGATTTCACTCTGTCACCCAGGCGGGAGTGCAGTGGTGCGATCATAGCGGGGACTACAAGTGTGCACCACATGCTTGTCTACGAACCTGAAGTATTCTGATGCAGTGGAGAGAGTGTAGAACTCTGGAGTGAAGAGATCTGCCTGGAACCCTGACTCTATCACTAGGAGATTCCTTGGAATGAAACCAATGGGAGTCCAGGGTTTGGGAGAGTCTCATCAGAGCAGATGGGCGAGCAGCAGCCAGAACGCTTGTTGCCTTTGGCTGAGAACACTATCCTGGATCTGAATGTCTTATCAGGACCTGAAGTAGGTGGCTGCCCATCCAGGTATTCTACAGGCACTTGCCCGTGAAACCTTCACCACTCCTTGAATCTGGTTCTGCAAAGTGGGACAGCTGAGACTTAGGCTAAGTGACTTACTGAGGCAGCAGTCAGCACCGTGTGGGACCAGCCCCCATGCTGTTTCCCAAATGGAGGCACCTTCCTGCATACCTTGGGCGTGATCTGTAACAGCTCAGAAAGCTTGGACACCAGCAGGGTGGCACCTATATGGGGAGCACCTGTCCGCACTGACTGCATTCAATAAGCGTTCATTTCATCACCCTTCACCATGAGTCTCCCTCTGTAGTCCAGGCTGCAGTGTAGTGGCGTGATCTCAGTTCAGTGCAATCTCTGCCTTCTGGCTTCAAGCGATTCTCCTGCCTCAGGCTCCCGTGTAGCTGGGATTACAGCTTTGTCACTCCAAGAGATGGCCCTGGGACTGAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGTTTTGATTCTGGCAAGACCAGACTACACTCCCCTCTACCTGGCAGAAACCCTACCCATCCTTCAAGTCCAGGATAGAGATCTCAAAGAAGTTTCCTACCGAAGTGCAGCAGATCCCCACCACATCTGGGCCCCTCGGGGGCAGGGCTTTCCTACATCCATCTCTGCATTGCCAGCTCCGAGACAGGGACACTCAGAAGGTGCAAGGAGGCCGGGCGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACGAGGTGGGTAAATTGAGGCCCAAGGAGAGGAATGGACTTGCTGTGGACATTCCAAGAGCCCAGAGGCAACTCAGGCCAAGGCGAGTCTGTCTGTTCTGAATCTCTTAGGTCAGTTCTGAATCCAAACAGTAACCGGACAAGCCCATTCTCAGGAGCTCCTCAGCTCCATTCCGTGGGGGCTTGGTTACCTGTAACAGGGCCTCAACAGGAGGGTCATAGACTTGCCCATTGCTTCCAAGCAACAGGGAGTTGGCATTGCCCTGCCTCCTGTGGGACTCGCAAACATAAAATCTCAGGCTCTCTCATTCTCACATCTACATTACATAGCACTGACTCTGTGCCGGACACTGTTCTTAGTGCTTTGCAAATAGTAATTTATATAGTCCTCATTGACTGGGAAGCTATATTAATTTTGACATTATTCCTGAGAAAAGCATATCCCTTCCTGGGTTCTGGCCCTGTTAACAGGAATGTTTTAAAACTTT</dnaseq>| | sequence = <dnaseq>TGCGGGCCCTTGCGGGGGCTGGTTCCAGCAGCAACCGCCGGGCAGGGCCCCTCCCGACCGCGACCTCCTGTCCGCACCGTAGGGCAGCCGGCCGGGCCAGCCTCCCTCACAGGACTACCGAGGAAGAGGTAGGATTTCACTCTGTCACCCAGGCGGGAGTGCAGTGGTGCGATCATAGCGGGGACTACAAGTGTGCACCACATGCTTGTCTACGAACCTGAAGTATTCTGATGCAGTGGAGAGAGTGTAGAACTCTGGAGTGAAGAGATCTGCCTGGAACCCTGACTCTATCACTAGGAGATTCCTTGGAATGAAACCAATGGGAGTCCAGGGTTTGGGAGAGTCTCATCAGAGCAGATGGGCGAGCAGCAGCCAGAACGCTTGTTGCCTTTGGCTGAGAACACTATCCTGGATCTGAATGTCTTATCAGGACCTGAAGTAGGTGGCTGCCCATCCAGGTATTCTACAGGCACTTGCCCGTGAAACCTTCACCACTCCTTGAATCTGGTTCTGCAAAGTGGGACAGCTGAGACTTAGGCTAAGTGACTTACTGAGGCAGCAGTCAGCACCGTGTGGGACCAGCCCCCATGCTGTTTCCCAAATGGAGGCACCTTCCTGCATACCTTGGGCGTGATCTGTAACAGCTCAGAAAGCTTGGACACCAGCAGGGTGGCACCTATATGGGGAGCACCTGTCCGCACTGACTGCATTCAATAAGCGTTCATTTCATCACCCTTCACCATGAGTCTCCCTCTGTAGTCCAGGCTGCAGTGTAGTGGCGTGATCTCAGTTCAGTGCAATCTCTGCCTTCTGGCTTCAAGCGATTCTCCTGCCTCAGGCTCCCGTGTAGCTGGGATTACAGCTTTGTCACTCCAAGAGATGGCCCTGGGACTGAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGTTTTGATTCTGGCAAGACCAGACTACACTCCCCTCTACCTGGCAGAAACCCTACCCATCCTTCAAGTCCAGGATAGAGATCTCAAAGAAGTTTCCTACCGAAGTGCAGCAGATCCCCACCACATCTGGGCCCCTCGGGGGCAGGGCTTTCCTACATCCATCTCTGCATTGCCAGCTCCGAGACAGGGACACTCAGAAGGTGCAAGGAGGCCGGGCGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACGAGGTGGGTAAATTGAGGCCCAAGGAGAGGAATGGACTTGCTGTGGACATTCCAAGAGCCCAGAGGCAACTCAGGCCAAGGCGAGTCTGTCTGTTCTGAATCTCTTAGGTCAGTTCTGAATCCAAACAGTAACCGGACAAGCCCATTCTCAGGAGCTCCTCAGCTCCATTCCGTGGGGGCTTGGTTACCTGTAACAGGGCCTCAACAGGAGGGTCATAGACTTGCCCATTGCTTCCAAGCAACAGGGAGTTGGCATTGCCCTGCCTCCTGTGGGACTCGCAAACATAAAATCTCAGGCTCTCTCATTCTCACATCTACATTACATAGCACTGACTCTGTGCCGGACACTGTTCTTAGTGCTTTGCAAATAGTAATTTATATAGTCCTCATTGACTGGGAAGCTATATTAATTTTGACATTATTCCTGAGAAAAGCATATCCCTTCCTGGGTTCTGGCCCTGTTAACAGGAATGTTTTAAAACTTT</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:NONHSAG033519]] | + | [[Category:Intergenic]][[Category:NONHSAG033519]][[Category:Transcripts]] |
Latest revision as of 00:16, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT084348 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1767 nt |
Genomic location |
chr22-:24834244..24891042 |
Exon number |
8 |
Exons |
24834244..24834726,24835262..24835535,24837960..24838108,24848179..24848296,24856421..24856739,24867736..24867863,24870951..24871121,24890658..24891042 |
Genome context |
|
Sequence |
000001 TGCGGGCCCT TGCGGGGGCT GGTTCCAGCA GCAACCGCCG GGCAGGGCCC CTCCCGACCG CGACCTCCTG TCCGCACCGT 000080
000081 AGGGCAGCCG GCCGGGCCAG CCTCCCTCAC AGGACTACCG AGGAAGAGGT AGGATTTCAC TCTGTCACCC AGGCGGGAGT 000160 000161 GCAGTGGTGC GATCATAGCG GGGACTACAA GTGTGCACCA CATGCTTGTC TACGAACCTG AAGTATTCTG ATGCAGTGGA 000240 000241 GAGAGTGTAG AACTCTGGAG TGAAGAGATC TGCCTGGAAC CCTGACTCTA TCACTAGGAG ATTCCTTGGA ATGAAACCAA 000320 000321 TGGGAGTCCA GGGTTTGGGA GAGTCTCATC AGAGCAGATG GGCGAGCAGC AGCCAGAACG CTTGTTGCCT TTGGCTGAGA 000400 000401 ACACTATCCT GGATCTGAAT GTCTTATCAG GACCTGAAGT AGGTGGCTGC CCATCCAGGT ATTCTACAGG CACTTGCCCG 000480 000481 TGAAACCTTC ACCACTCCTT GAATCTGGTT CTGCAAAGTG GGACAGCTGA GACTTAGGCT AAGTGACTTA CTGAGGCAGC 000560 000561 AGTCAGCACC GTGTGGGACC AGCCCCCATG CTGTTTCCCA AATGGAGGCA CCTTCCTGCA TACCTTGGGC GTGATCTGTA 000640 000641 ACAGCTCAGA AAGCTTGGAC ACCAGCAGGG TGGCACCTAT ATGGGGAGCA CCTGTCCGCA CTGACTGCAT TCAATAAGCG 000720 000721 TTCATTTCAT CACCCTTCAC CATGAGTCTC CCTCTGTAGT CCAGGCTGCA GTGTAGTGGC GTGATCTCAG TTCAGTGCAA 000800 000801 TCTCTGCCTT CTGGCTTCAA GCGATTCTCC TGCCTCAGGC TCCCGTGTAG CTGGGATTAC AGCTTTGTCA CTCCAAGAGA 000880 000881 TGGCCCTGGG ACTGAGAAGT GGATGGCAGC TGTGACAGCA GGAGAGGACT GCCTGAGGCT CCCCGGGCAG AGGCTCTGGT 000960 000961 GCCAGGTTAG CAGCAGGACC GACGGCAGAC CCAGCAGCCA GAGAGTGAAA GTTTTGATTC TGGCAAGACC AGACTACACT 001040 001041 CCCCTCTACC TGGCAGAAAC CCTACCCATC CTTCAAGTCC AGGATAGAGA TCTCAAAGAA GTTTCCTACC GAAGTGCAGC 001120 001121 AGATCCCCAC CACATCTGGG CCCCTCGGGG GCAGGGCTTT CCTACATCCA TCTCTGCATT GCCAGCTCCG AGACAGGGAC 001200 001201 ACTCAGAAGG TGCAAGGAGG CCGGGCGCAG TGGCTCACAC CTGTAATCCC AGCACTTTGG GAGGCCGAGG CAGGCGGATC 001280 001281 ACGAGGTGGG TAAATTGAGG CCCAAGGAGA GGAATGGACT TGCTGTGGAC ATTCCAAGAG CCCAGAGGCA ACTCAGGCCA 001360 001361 AGGCGAGTCT GTCTGTTCTG AATCTCTTAG GTCAGTTCTG AATCCAAACA GTAACCGGAC AAGCCCATTC TCAGGAGCTC 001440 001441 CTCAGCTCCA TTCCGTGGGG GCTTGGTTAC CTGTAACAGG GCCTCAACAG GAGGGTCATA GACTTGCCCA TTGCTTCCAA 001520 001521 GCAACAGGGA GTTGGCATTG CCCTGCCTCC TGTGGGACTC GCAAACATAA AATCTCAGGC TCTCTCATTC TCACATCTAC 001600 001601 ATTACATAGC ACTGACTCTG TGCCGGACAC TGTTCTTAGT GCTTTGCAAA TAGTAATTTA TATAGTCCTC ATTGACTGGG 001680 001681 AAGCTATATT AATTTTGACA TTATTCCTGA GAAAAGCATA TCCCTTCCTG GGTTCTGGCC CTGTTAACAG GAATGTTTTA 001760 001761 AAACTTT |