Difference between revisions of "NONHSAT091505"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>gtccagccTCAATAAATATTAAACAAGGGAAAAATTATGAGCTAAGATGTTTCTCTGATGTAGGATGTACCTCATATTCCCAAATGCTTGGTGTTAATTGAGGTTTCTGTTATTTGTGTCTCATCTTCATTGGTGATTTTTGTGACTTGCAAGTGAATATGCCACTATATATGGCCCCAGATGTATTCAAGAGCACCCTTATCAGACCTTTTCATTATTGTTTCTATTTACCCTCCATCTCCAGGCTGGTCCCAGGGACATTTTCTTATGTAAATAAATTGTTAATCATGTATTAATGCTACTTTATTGTTTGTGTTTCAGGAATCCAAGACCAAAGAAGATGTTAAAGAACCAGATGTGTCAGAAGAATTGGATACAAAACTCCCTCTTGATG</dnaseq>| | sequence = <dnaseq>gtccagccTCAATAAATATTAAACAAGGGAAAAATTATGAGCTAAGATGTTTCTCTGATGTAGGATGTACCTCATATTCCCAAATGCTTGGTGTTAATTGAGGTTTCTGTTATTTGTGTCTCATCTTCATTGGTGATTTTTGTGACTTGCAAGTGAATATGCCACTATATATGGCCCCAGATGTATTCAAGAGCACCCTTATCAGACCTTTTCATTATTGTTTCTATTTACCCTCCATCTCCAGGCTGGTCCCAGGGACATTTTCTTATGTAAATAAATTGTTAATCATGTATTAATGCTACTTTATTGTTTGTGTTTCAGGAATCCAAGACCAAAGAAGATGTTAAAGAACCAGATGTGTCAGAAGAATTGGATACAAAACTCCCTCTTGATG</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG035900]][[Category:Transcripts]] |
Latest revision as of 00:39, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT091505 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
394 nt |
| Genomic location |
chr3+:122405606..122411186 |
| Exon number |
2 |
| Exons |
122405606..122405960,122411148..122411186 |
| Genome context |
|
| Sequence |
000001 gtccagccTC AATAAATATT AAACAAGGGA AAAATTATGA GCTAAGATGT TTCTCTGATG TAGGATGTAC CTCATATTCC 000080
000081 CAAATGCTTG GTGTTAATTG AGGTTTCTGT TATTTGTGTC TCATCTTCAT TGGTGATTTT TGTGACTTGC AAGTGAATAT 000160 000161 GCCACTATAT ATGGCCCCAG ATGTATTCAA GAGCACCCTT ATCAGACCTT TTCATTATTG TTTCTATTTA CCCTCCATCT 000240 000241 CCAGGCTGGT CCCAGGGACA TTTTCTTATG TAAATAAATT GTTAATCATG TATTAATGCT ACTTTATTGT TTGTGTTTCA 000320 000321 GGAATCCAAG ACCAAAGAAG ATGTTAAAGA ACCAGATGTG TCAGAAGAAT TGGATACAAA ACTCCCTCTT GATG |
Predicted Small Protein
| Name | NONHSAT091505_smProtein_158:295 |
| Length | 46 |
| Molecular weight | 5334.3863 |
| Aromaticity | 0.2 |
| Instability index | 83.4957777778 |
| Isoelectric point | 9.35980224609 |
| Runs | 7 |
| Runs residual | 0.00669191919192 |
| Runs probability | 0.0678830090597 |
| Amino acid sequence | MPLYMAPDVFKSTLIRPFHYCFYLPSISRLVPGTFSYVNKLLIMY |
| Secondary structure | LLLLLLLLLLHHHLLLLLEEEEELLLLLLLLLLLHHHHHHHHHHL |
| PRMN | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLL |
| PiMo | oooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiii |
