Difference between revisions of "NONHSAT093383"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>agtaataatagtcctaccctcatggggttgttgtgaggattaaacaagaattaattaaatgaataaaagtgcttagaactatgcctggcacatagttaagtgcttaatgattttcatctattattGTTTATTTAGAATAagagtgccctggaagcatgaggaaggaagcaattaatttggcccaggagagctgcaaaaagttccatagaaaccatgatactggagcagagttttgatcaatgagtactttcccagaacttgggttggaaggagggcaatctaagaagaaaaaggctgatgcaaaggctcagAGGCATGGTTTGCATATCCATCATAGTTCATGACTGACAATCTAGAGGTTGGAGCTAACATTGAAAAACATATTGATTATTATGGGACCAAGTGTTTCCCAAAT</dnaseq>| | sequence = <dnaseq>agtaataatagtcctaccctcatggggttgttgtgaggattaaacaagaattaattaaatgaataaaagtgcttagaactatgcctggcacatagttaagtgcttaatgattttcatctattattGTTTATTTAGAATAagagtgccctggaagcatgaggaaggaagcaattaatttggcccaggagagctgcaaaaagttccatagaaaccatgatactggagcagagttttgatcaatgagtactttcccagaacttgggttggaaggagggcaatctaagaagaaaaaggctgatgcaaaggctcagAGGCATGGTTTGCATATCCATCATAGTTCATGACTGACAATCTAGAGGTTGGAGCTAACATTGAAAAACATATTGATTATTATGGGACCAAGTGTTTCCCAAAT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG036738]][[Category:Transcripts]] |
Latest revision as of 00:46, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT093383 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
415 nt |
| Genomic location |
chr3-:178627391..178632485 |
| Exon number |
2 |
| Exons |
178627391..178627494,178632175..178632485 |
| Genome context |
|
| Sequence |
000001 agtaataata gtcctaccct catggggttg ttgtgaggat taaacaagaa ttaattaaat gaataaaagt gcttagaact 000080
000081 atgcctggca catagttaag tgcttaatga ttttcatcta ttattGTTTA TTTAGAATAa gagtgccctg gaagcatgag 000160 000161 gaaggaagca attaatttgg cccaggagag ctgcaaaaag ttccatagaa accatgatac tggagcagag ttttgatcaa 000240 000241 tgagtacttt cccagaactt gggttggaag gagggcaatc taagaagaaa aaggctgatg caaaggctca gAGGCATGGT 000320 000321 TTGCATATCC ATCATAGTTC ATGACTGACA ATCTAGAGGT TGGAGCTAAC ATTGAAAAAC ATATTGATTA TTATGGGACC 000400 000401 AAGTGTTTCC CAAAT |
Predicted Small Protein
| Name | NONHSAT093383_smProtein_239:343 |
| Length | 35 |
| Molecular weight | 3712.1609 |
| Aromaticity | 0.0294117647059 |
| Instability index | 75.9235294118 |
| Isoelectric point | 9.82232666016 |
| Runs | 5 |
| Runs residual | 0.0390915860015 |
| Runs probability | 0.0298357180711 |
| Amino acid sequence | MSTFPELGLEGGQSKKKKADAKAQRHGLHIHHSS |
| Secondary structure | LLLLLLLLLLLLLLHHHHHHHHHHHLLLEEELLL |
| PRMN | - |
| PiMo | - |
