Difference between revisions of "NONHSAT096726"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>ACATTTACCAGAGAAGCACTGATCAGGACAAAAGAAGTGCAGAACTTTTCTTTATATTTATTTACTTCAACAGCCATTATATCAGCACATTATGTATAGGTTACCTTCAGCAAGTTGCCTTAGCTGGAAGATTGGAACATATACAATAAAAATGTCACAATTGTATGATTTCACTtttatttatttatttatttatttTTGtttatttttttattatactttaagttttagggtacatgtgcacaacgtgctagtttgttacatatgtatacatgtgccatgttggcatgctgctcccattaactcgtcatttaacattagCTGCATGCATACTGTCACCAAGCAAATATAAGAGGATGGATGGTCCTGTGCTTAACCTAAAGGTACTCCACAAACCCACAAAAGAGCAGAAGAAACCAAGCTATGAAAGATCAGACAAAGAGGAAGAAAATGCTGTTTTCAGCAACATATGAAAACTTTATGTTGTTTCCAGTCCTGATAACAACAGAGTGACAGCACATATATGGCTGGTATTCAAGGGTCCAAGATCAATGAAAGAAAACACAAGAAAAAGAATTGAAAGTATCTTACATCAGATGCTGAAGAACCACTCAGGATCCTTGACTACAGATCTGAATTCTCTGAGGCTTATGGGTAAGCTCATGATGGGAGTGG</dnaseq>| | sequence = <dnaseq>ACATTTACCAGAGAAGCACTGATCAGGACAAAAGAAGTGCAGAACTTTTCTTTATATTTATTTACTTCAACAGCCATTATATCAGCACATTATGTATAGGTTACCTTCAGCAAGTTGCCTTAGCTGGAAGATTGGAACATATACAATAAAAATGTCACAATTGTATGATTTCACTtttatttatttatttatttatttTTGtttatttttttattatactttaagttttagggtacatgtgcacaacgtgctagtttgttacatatgtatacatgtgccatgttggcatgctgctcccattaactcgtcatttaacattagCTGCATGCATACTGTCACCAAGCAAATATAAGAGGATGGATGGTCCTGTGCTTAACCTAAAGGTACTCCACAAACCCACAAAAGAGCAGAAGAAACCAAGCTATGAAAGATCAGACAAAGAGGAAGAAAATGCTGTTTTCAGCAACATATGAAAACTTTATGTTGTTTCCAGTCCTGATAACAACAGAGTGACAGCACATATATGGCTGGTATTCAAGGGTCCAAGATCAATGAAAGAAAACACAAGAAAAAGAATTGAAAGTATCTTACATCAGATGCTGAAGAACCACTCAGGATCCTTGACTACAGATCTGAATTCTCTGAGGCTTATGGGTAAGCTCATGATGGGAGTGG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG038098]][[Category:Transcripts]] |
Latest revision as of 00:59, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT096726 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
675 nt |
| Genomic location |
chr4-:69054121..69083722 |
| Exon number |
3 |
| Exons |
69054121..69054474,69071594..69071815,69083624..69083722 |
| Genome context |
|
| Sequence |
000001 ACATTTACCA GAGAAGCACT GATCAGGACA AAAGAAGTGC AGAACTTTTC TTTATATTTA TTTACTTCAA CAGCCATTAT 000080
000081 ATCAGCACAT TATGTATAGG TTACCTTCAG CAAGTTGCCT TAGCTGGAAG ATTGGAACAT ATACAATAAA AATGTCACAA 000160 000161 TTGTATGATT TCACTtttat ttatttattt atttatttTT Gtttattttt ttattatact ttaagtttta gggtacatgt 000240 000241 gcacaacgtg ctagtttgtt acatatgtat acatgtgcca tgttggcatg ctgctcccat taactcgtca tttaacatta 000320 000321 gCTGCATGCA TACTGTCACC AAGCAAATAT AAGAGGATGG ATGGTCCTGT GCTTAACCTA AAGGTACTCC ACAAACCCAC 000400 000401 AAAAGAGCAG AAGAAACCAA GCTATGAAAG ATCAGACAAA GAGGAAGAAA ATGCTGTTTT CAGCAACATA TGAAAACTTT 000480 000481 ATGTTGTTTC CAGTCCTGAT AACAACAGAG TGACAGCACA TATATGGCTG GTATTCAAGG GTCCAAGATC AATGAAAGAA 000560 000561 AACACAAGAA AAAGAATTGA AAGTATCTTA CATCAGATGC TGAAGAACCA CTCAGGATCC TTGACTACAG ATCTGAATTC 000640 000641 TCTGAGGCTT ATGGGTAAGC TCATGATGGG AGTGG |
Predicted Small Protein
| Name | NONHSAT096726_smProtein_272:472 |
| Length | 67 |
| Molecular weight | 7535.8126 |
| Aromaticity | 0.0454545454545 |
| Instability index | 71.6787878788 |
| Isoelectric point | 9.30120849609 |
| Runs | 7 |
| Runs residual | 0.0445472690982 |
| Runs probability | 0.0349382996442 |
| Amino acid sequence | MCHVGMLLPLTRHLTLAACILSPSKYKRMDGPVLNLKVLHKPTKEQKKPSYERSDKEEEN AVFSNI |
| Secondary structure | LLLLLLLLHHHHHHHHHHHHLLLLLLLLLLLLLLLEEEELLLLLLLLLLLLLLLLHHHHH HHHLLL |
| PRMN | - |
| PiMo | - |
