Difference between revisions of "NONHSAT099938"
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sequence = <dnaseq>GGGGTGATAAAGAAATGAAATTGAAATGCAGTTAGTTTTGAGAATGGTAGTTGGCTTTTGCAAATTTGTTTTCAGGTGATCATTATAAAATCCCCCCACCTGCACCAATCACATCCACTGTGATGTGGAGAAAGGGCTCATGGCACTGCACTGGGGCACCGCGTTGGGGTCACACCTGCCACTCACGGCCCGCCATGTCCGTGTTGCAGAGGAGGAGACCCACCCGGTGGACTTGAGCTCGCTCTCCAGTAAGCTACTCCCAGGCTTCACCACGCTGGGCTTCAAAGACGAGAGAAGAAACAAAGTCACCTTTCTCTCCAGTGCCACTACTGCGCTTTCGATGCAGAATAATTCAGTATTTGGCGACTTGAAGTCGGACGAGATGGAGCTGCTCTACTCAGCCTACGGAGATGAGACAGGCGTGCAGTGTGCGCTGAGATGGACACCCGCTCCGGGAGCCAGTGTTCCGTCACCCCAGAAGCCATACTCAATAATGAAAAGCTGGTCTTGCCGCCCCGCATCTCCAGAGTGAACGGCTGGTCGTTACCCCTGCACTACTTCCAGGTGGTGACCTGGGCTGTCTTCGTGGGCCTTTCCTCGGCCACCTTCGGGATCTTCATTCCCTTCCTGCCTCACGCGTGGAAATACATTGCCTACGTGGTATCCTTTTCATCGTGGCATGGTCTAAGCGGGAGGGGTTCCTGGAGGAACTTGCGATGGACCTGGCTGTGGGGTCTGGGCCATGGCTGC</dnaseq>| | sequence = <dnaseq>GGGGTGATAAAGAAATGAAATTGAAATGCAGTTAGTTTTGAGAATGGTAGTTGGCTTTTGCAAATTTGTTTTCAGGTGATCATTATAAAATCCCCCCACCTGCACCAATCACATCCACTGTGATGTGGAGAAAGGGCTCATGGCACTGCACTGGGGCACCGCGTTGGGGTCACACCTGCCACTCACGGCCCGCCATGTCCGTGTTGCAGAGGAGGAGACCCACCCGGTGGACTTGAGCTCGCTCTCCAGTAAGCTACTCCCAGGCTTCACCACGCTGGGCTTCAAAGACGAGAGAAGAAACAAAGTCACCTTTCTCTCCAGTGCCACTACTGCGCTTTCGATGCAGAATAATTCAGTATTTGGCGACTTGAAGTCGGACGAGATGGAGCTGCTCTACTCAGCCTACGGAGATGAGACAGGCGTGCAGTGTGCGCTGAGATGGACACCCGCTCCGGGAGCCAGTGTTCCGTCACCCCAGAAGCCATACTCAATAATGAAAAGCTGGTCTTGCCGCCCCGCATCTCCAGAGTGAACGGCTGGTCGTTACCCCTGCACTACTTCCAGGTGGTGACCTGGGCTGTCTTCGTGGGCCTTTCCTCGGCCACCTTCGGGATCTTCATTCCCTTCCTGCCTCACGCGTGGAAATACATTGCCTACGTGGTATCCTTTTCATCGTGGCATGGTCTAAGCGGGAGGGGTTCCTGGAGGAACTTGCGATGGACCTGGCTGTGGGGTCTGGGCCATGGCTGC</dnaseq>| | ||
}} | }} | ||
− | [[Category:Sense]][[Category:NONHSAG039650]][[Category:Transcripts]] | + | [[Category:Sense]][[Category:NONHSAG039650]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 01:13, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT099938 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
750 nt |
Genomic location |
chr5-:850406..880213 |
Exon number |
3 |
Exons |
850406..850717,878470..878602,879909..880213 |
Genome context |
|
Sequence |
000001 GGGGTGATAA AGAAATGAAA TTGAAATGCA GTTAGTTTTG AGAATGGTAG TTGGCTTTTG CAAATTTGTT TTCAGGTGAT 000080
000081 CATTATAAAA TCCCCCCACC TGCACCAATC ACATCCACTG TGATGTGGAG AAAGGGCTCA TGGCACTGCA CTGGGGCACC 000160 000161 GCGTTGGGGT CACACCTGCC ACTCACGGCC CGCCATGTCC GTGTTGCAGA GGAGGAGACC CACCCGGTGG ACTTGAGCTC 000240 000241 GCTCTCCAGT AAGCTACTCC CAGGCTTCAC CACGCTGGGC TTCAAAGACG AGAGAAGAAA CAAAGTCACC TTTCTCTCCA 000320 000321 GTGCCACTAC TGCGCTTTCG ATGCAGAATA ATTCAGTATT TGGCGACTTG AAGTCGGACG AGATGGAGCT GCTCTACTCA 000400 000401 GCCTACGGAG ATGAGACAGG CGTGCAGTGT GCGCTGAGAT GGACACCCGC TCCGGGAGCC AGTGTTCCGT CACCCCAGAA 000480 000481 GCCATACTCA ATAATGAAAA GCTGGTCTTG CCGCCCCGCA TCTCCAGAGT GAACGGCTGG TCGTTACCCC TGCACTACTT 000560 000561 CCAGGTGGTG ACCTGGGCTG TCTTCGTGGG CCTTTCCTCG GCCACCTTCG GGATCTTCAT TCCCTTCCTG CCTCACGCGT 000640 000641 GGAAATACAT TGCCTACGTG GTATCCTTTT CATCGTGGCA TGGTCTAAGC GGGAGGGGTT CCTGGAGGAA CTTGCGATGG 000720 000721 ACCTGGCTGT GGGGTCTGGG CCATGGCTGC |
Predicted Small Protein
Name | NONHSAT099938_smProtein_122:235 |
Length | 38 |
Molecular weight | 4475.1434 |
Aromaticity | 0.108108108108 |
Instability index | 124.564864865 |
Isoelectric point | 12.1271362305 |
Runs | 5 |
Runs residual | 0.0446317877511 |
Runs probability | 0.024960254372 |
Amino acid sequence | MWRKGSWHCTGAPRWGHTCHSRPAMSVLQRRRPTRWT |
Secondary structure | LLLLLLEELLLLLLLLLLLLLLLLLLHHHLLLLLLLL |
PRMN | - |
PiMo | - |