Difference between revisions of "NONHSAT100674"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>TTTAACTAACACATATTTTATGCATTAGAAATTATATTTGGTTATTTTTTCAGGAAGTGTATTTTTTACATTATTTAATTCCTCAGTTAATTAATTTTTACATTTGGCTCTTTTCTGATACATTCAAGAAGAAATATATATATTCCTCATAGTAAATCTTAGGCCTTGTATTTCCAAGGTCTTACTGTGATTTTTACCTTGAATAATTACTGATATTTCTTCATGGTTTAATTTTTGTGTATTTCTGTGAAGAGCAGCCTTGGTTTTGGATGCCATGAAAGGTTTATTATATTGCACCTACTTTATATTTTTAATCATTCATATTGATTGATAATCTGTCCATTGCAGAAATgaggagtttccaaaaagtttatggaaatatgtattataaaaaaaactatgcataaatttcaactttttgcacaaaaataaatgtatactagcttgttataacatgtctaaacaggatccagttgaaggcactgagaagaataagacatcagtttgaaaagagcctctattaaagcaacttgaattatgctaaaattgaagtaagaacaaacatcaaatgtatggtgaagcttgggtagaagaatggtataattgctgatgctctacaaaaagtttatggggataatgtcacaaagaaatgagcagtttacggccaggcatagtggcttgcacctgtaatcctggcactttgggaggccgaggcaggcggatcacgaagtcaagtgattgagaccagccttgccaacataatgaaaccccgcctctactaaaaatacaaaaaattagccgggcatagtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcccgccactgcactccagcctgggcgacagagcgagactccgtctc</dnaseq>| | sequence = <dnaseq>TTTAACTAACACATATTTTATGCATTAGAAATTATATTTGGTTATTTTTTCAGGAAGTGTATTTTTTACATTATTTAATTCCTCAGTTAATTAATTTTTACATTTGGCTCTTTTCTGATACATTCAAGAAGAAATATATATATTCCTCATAGTAAATCTTAGGCCTTGTATTTCCAAGGTCTTACTGTGATTTTTACCTTGAATAATTACTGATATTTCTTCATGGTTTAATTTTTGTGTATTTCTGTGAAGAGCAGCCTTGGTTTTGGATGCCATGAAAGGTTTATTATATTGCACCTACTTTATATTTTTAATCATTCATATTGATTGATAATCTGTCCATTGCAGAAATgaggagtttccaaaaagtttatggaaatatgtattataaaaaaaactatgcataaatttcaactttttgcacaaaaataaatgtatactagcttgttataacatgtctaaacaggatccagttgaaggcactgagaagaataagacatcagtttgaaaagagcctctattaaagcaacttgaattatgctaaaattgaagtaagaacaaacatcaaatgtatggtgaagcttgggtagaagaatggtataattgctgatgctctacaaaaagtttatggggataatgtcacaaagaaatgagcagtttacggccaggcatagtggcttgcacctgtaatcctggcactttgggaggccgaggcaggcggatcacgaagtcaagtgattgagaccagccttgccaacataatgaaaccccgcctctactaaaaatacaaaaaattagccgggcatagtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcccgccactgcactccagcctgggcgacagagcgagactccgtctc</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG040010]][[Category:Transcripts]] |
Latest revision as of 01:16, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT100674 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
943 nt |
| Genomic location |
chr5+:18664831..18665773 |
| Exon number |
1 |
| Exons |
18664831..18665773 |
| Genome context |
|
| Sequence |
000001 TTTAACTAAC ACATATTTTA TGCATTAGAA ATTATATTTG GTTATTTTTT CAGGAAGTGT ATTTTTTACA TTATTTAATT 000080
000081 CCTCAGTTAA TTAATTTTTA CATTTGGCTC TTTTCTGATA CATTCAAGAA GAAATATATA TATTCCTCAT AGTAAATCTT 000160 000161 AGGCCTTGTA TTTCCAAGGT CTTACTGTGA TTTTTACCTT GAATAATTAC TGATATTTCT TCATGGTTTA ATTTTTGTGT 000240 000241 ATTTCTGTGA AGAGCAGCCT TGGTTTTGGA TGCCATGAAA GGTTTATTAT ATTGCACCTA CTTTATATTT TTAATCATTC 000320 000321 ATATTGATTG ATAATCTGTC CATTGCAGAA ATgaggagtt tccaaaaagt ttatggaaat atgtattata aaaaaaacta 000400 000401 tgcataaatt tcaacttttt gcacaaaaat aaatgtatac tagcttgtta taacatgtct aaacaggatc cagttgaagg 000480 000481 cactgagaag aataagacat cagtttgaaa agagcctcta ttaaagcaac ttgaattatg ctaaaattga agtaagaaca 000560 000561 aacatcaaat gtatggtgaa gcttgggtag aagaatggta taattgctga tgctctacaa aaagtttatg gggataatgt 000640 000641 cacaaagaaa tgagcagttt acggccaggc atagtggctt gcacctgtaa tcctggcact ttgggaggcc gaggcaggcg 000720 000721 gatcacgaag tcaagtgatt gagaccagcc ttgccaacat aatgaaaccc cgcctctact aaaaatacaa aaaattagcc 000800 000801 gggcatagtg gcgggcgcct gtagtcccag ctactcggga ggctgaggca ggagaatggc gtgaacccgg gaggcggagc 000880 000881 ttgcagtgag ccgagatccc gccactgcac tccagcctgg gcgacagagc gagactccgt ctc |
Predicted Small Protein
| Name | NONHSAT100674_smProtein_350:406 |
| Length | 19 |
| Molecular weight | 2291.6484 |
| Aromaticity | 0.277777777778 |
| Instability index | 44.4944444444 |
| Isoelectric point | 9.87347412109 |
| Runs | 5 |
| Runs residual | 0.0116959064327 |
| Runs probability | 0.0382264617558 |
| Amino acid sequence | MRSFQKVYGNMYYKKNYA |
| Secondary structure | LLHHHHHHHLLEEELLLL |
| PRMN | - |
| PiMo | - |
