Difference between revisions of "NONHSAT108944"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>tccaacttttttttTGGTCTGTTGTTAAAAGCCCCCCTATCCCATGCCTAAGTAATAAGTAATCTCAATATTACATTCCATCTCATATAATAAAATTTGACTTCCTAAAAGGGCTTGCTTCTTTTTAATTCAATGTCAATGCTGGAATTTCAGTTCTTAGCCTTGAAACCCTGGTGAAAAAATTCTCAGCAAGGTAAGAAGGAAAAAAATGTTCTCCCCTGCTCCTGAAGCTGGAGAGAACAATAAATGAAAACTGTTGTCATAAATGGTTATTTCTAACAATTTTTCAAACCCCTAGACTTCAAATATTTTGGACAGGACCTGACAAAATGACCCTTAATCTGTAAAACATCTGTACTTTTGACCACTCATCTTTCTTAATAATTCAGTTCTCTGGTGATAATGTTTGAGCTTAAAATCTCTATCTTCAGAAGGTAACGTGATTTGTGAATTTTCTGTCAAATCAGGAAAGAATCACTGGCATTGCCCTCTTCCCACACATGCATAGGATAAAATAGCTCTACTGGACTTTTTATTAATCAAAGAGCCCGAGAGACAGCTGAATGGCTGAACCAAGCAGAGAGTGGAAACTTGGGGAGGGTAATTCCTTGCTGGGCCTTAAAAGGAGTCCACAAGATAGGAAAAAAACGAAAAAGCCAAATAAGATGAACCTCTATTCAGGCCCCAATGAGAGGCTGCTTGACTCTGATCTTTCGTTAGCTGGCTCAAAATTTTGTTCTTAAAGAATTATTTTTACTCAAAATCAAGAACTGTTAGAAAACAAGAAAAATTATGGAGTTTTGTTGTTGATTTCCACCTCTCTACATATATATATgaaatacatatctcctcccgatacacatgcacacacgcaaaaacatatttaactgaaacaacggtttcatgaaactatagttactctcattacctgtgatgcaggcaagtattttcaattgtattttattctatttcattctacttggaaaaaaagtcttttggtctcaacataaatgggttctgacctgcagtttcaaGCCAATACGTTACAGTAAGAGTAAATGTAGGGTTTCTCCCAGTTTTATCTGGCAGTCCCAAAGTCAGGATCAGAGTAACCGATGGAGCATCATTTGTACGCTCCACGTCTGAGGAGGAGGTCTGGGAAAAGATCCAACGTGTAggactggcgcagaggctcaggcctgtaatcccagcactttaagaggtggaggcgggaggataacttgaggtcaacagttcgagacaagcctggcaaacatggtgaaaccccgtctctactaaaaatacagaaattatccaggcgtggtggtgcgcacctgtagatccagctcctcgggaggctgaggcacgaaaatcgcttgaacgcgggaggcggaggttgcagtgagacaagatcacaccactgcactccagcctgggcgacagagcgagaccctgtctcaaataaaaaaaaTAATAATAATAATCCAATGTGTCCCTAGTCTGGCTTTCAGGGTCTTAGATGAGGTTCGGAAGTGGACTTAGGAGCCTTAGGAGCGCAGCCAGTGCTGTGGATTCCCACATCCACGGGACCTGCGGTTTCGGGTTATTCCATTCAGGGATACATGACGTCCCTCATTTCTACCTACCAGTGGGCTGGTCAAGATTCTCATTTATCAAGTCAGTTGGAGTGGGCTTAAGTAAGTTCTCAGCCAAGGCTGTGGGGTCTGGAGGACCAGATATCCCGACCAAAAGCCCCCCCTCCCATTCCTTTCACACGCCTGCCGCAGAGGTGCACGGGTGCGAGTGGGGAACTGAGGCAAGAAGCAGATGGGGCGGCACCGAGAGAAGAGAAACTACGCTAGAGGAAAAGCTCGAGCTGTTAcccctcccaacttcttccgccttccgccttcccccttccccctctttcccctcttgcccctctccAGCTTTTCTGGTCCAACCCTCTTCTGCGCCTAACACTGGCACCTCCTTTTCTTCCGGCTGATGAATAATTGTCCGCAAACCAGCCTCTCTGGGGCACTGAGGGGCGGGAAGGTTAGAAGGAGCCAGGGCTAGAGTCCTGGAAGGTGGCAGTCAGGTCGCAGGGCCACAGCAGTCACTCTGCGACTCTCTCTTCCGGTGTTTCTCCAGCGCCAAGCGGGAGAAGACGGAGCCTGGGAGCTGGGACTGGAGGAGCGGGAAGCGCAGTATCGGGACCACGGCTCTGGGACCAGGAAAAACGCAGACTCTCCAGAGTCAATGTCTACTTCAGCCAGCTCAAGGGCGCGACAACCTGGCGCCGAGCATCTCAGGCCGCCGCGGGGACCCCCCCTAAGGGACTCGGGAACACCTGCCTACCCTAGAAGAGGCGGAGAATAACCCCGTAGGGAGTTAAGCGGCCTCTGCCTACAGCGTTCCTCCCGCCTCCACGGCGCCGAGCCCTGATTGACGTTCAGCCAGGCCAATCATAGCCTGTGTCTGAGGCGCGCGGAGCTGGAGCGCCCAGGGCATGTCCGCCGATCCCAAGGAGGCAATCTGTCAGGCGCCGCCCGGGCGGCAGTATGCCTGAGGGGGTCCTCCGTGTTCGCGCCTCCCGCCGCCTGCACTGAAAGGTCTGTACCTGAGCCTGGATACTTGAACAGAGGCAGACACTGCGGCTCAAAACCCCAAGGaatatcctagctctgagacaaaaattgggaacctcagcatgagtttgtcacctgaatgaaataaaaaaaatcacgttgaaggctggtgcagtaacatgtgcctgtagtcccagctactctggaggctgagtcaggaggatcacttgagaccagaagttcaggaattcaagactggcttgagcaacatagcaagacttcatttcaaaacaaacagaaaaaagccaccaccttcagtatttcttgccaaagcaaaggagccatttgttctttacgatggtcaggaaaggaagcatcaaggtcatcaaatgaaaaattttcagcatttcagcctctctgctcagggaaatatctgaatctagaatatcacaacatgagccaaaaccgccccatttctcatgccacatgtcactcttaacacaaggttactcaacctcgagcatggttggcatttggggctgaataattcttttttgtagggggctgtcctgggcattgtaggatgctcatgagctacctcagtctctaccacccactagatgccagtagcattgacccctgatctctctacccaagttgtgacaactaaaaccatctctggataatggaggaaccttaaatgcatattgctaaggaaaagccaatctgaaaggattacatattgtatgagtccaactatatggtaatctggaaaaggcaaaaccatggagacagtgaaaaggtagtggttaccagtggtccatgggaagggttggatgaataggtggagcacagaggatttttaaggcagtgaaactattctgaatgatactgtaatggtggatacatgtcatacctttgtcaaaaccaataaaatataacaaccaataaaactgcacaaagagtgaaccctaatgtaaactatggacttaataatgtatcaatattggctcaccaattttaacaaatgtaccacactaatgcaagatgttactaatagtggaaactggagggaagagggcttgaggggacatacgggaactctctgtaattcctgttcagtttttctgtaactgttaaactgtccaaaaaaagtctgttTTTATAAATGGAGGCATGGTTTTATATGGACTAAAATACTATGATTGCCTTTTTATTTTACACATGGTGAAATTAGAGCAGGACATATTTTAAACTCAAAATTCACAAAATTAATTTATGAAAATGTTTACCCAGATCAAGAATATTAAAGAAACTTAGATTAATATTGTTACCTTGAATTTATTTTACTGAGTAATCCTCTAAGACTCCTCTACACATTATTAATCTAGAAGGATTTTTAAAGTCTTTATGACAATTAATTATTGGTCTACAGTCAAATTGCGTATCCCCATTAACTAGAGTTATATTTTTCCATTTTCTGATCCAAAAACTTTAGGAACAGGAAATGTTTATTTTAGAAAACAAGAACACTTCTTAAGCATTTGCTGTTAACAGTTATTTTCACATGTGCTTGTACTTATTTTACACTTGTCAGAACATAGTATTTACCTTTGAACCAAGGTTTTATAATAAGCAAGCACTTTTTTTATTTAGAAGTCACATTTTCCAAGTAGAAAAATCATTAAAAATTCAGTCCTCTGAAGGCTAATTTCTTTAAATCATTTAACCTAATTGTTTAAGGTATAGATTGGAATTTTTCTCAGCACTCTCTTGAAAACAGGTGACAGTGGAACCCTGTTAGGTTCACAAATCCTAGACTTTGATTATATAGCCCAGGCTCAAATTTTTCTCGAATGTTACGAACATTCAAAGCATTAGGAGTCTTGGTTTCATTTCTTAATTTTTTTTCTTCTGGGTATATTTGAGACTCATCTTGGATTCAAATAAATTAATAATAGTCTCATGAAACCGATAAAAATGGGAGCTCCATTGAACATGAGAGACATTGATTCGTAGTTTCTAACATCCTCCAAATGAGGAGCCCATCCCTAATTTAGATGCTTCTTTCAAAGGAGGCTCCTTTCCTTCGTTATCCATAATATAGTCACACCAGTCCTGAAAAAACATGGAACAGACTCCAGATCTTTATATTTCATACTCTAAAGTCGTACAAGCCAATCTGCATTTCCTCTAGTGGAAACTGTATAGCTGGTCATCTTTCCAGGACCCTTTTATCAAGAAACAATGCAGCTTCTACATTTGTGCTGCTTCTACACCAAAACAGCTGGAATGTATATAGTATGGTTCTGGATGCTCTTGTATACCTCACTCTTCATTTCTCACCTAACCCATGtgctatgatttgaatgtttctcccctgcaaaactcatgttgaaatgtaattgccatgataacagtattaataggtggaatatttaagaggtgattagggtgggattggtgatgttataaaagggtaagttcagccccttcttgctctctctgtcacccttccaccttcctctgtgtgatgatgcaacaaaaaagcccttcccagatgccagcatcttgattttggacttctcagcctacagaactataagccaataaatttctgttatttgttattagtctgtgatattctgttacagtagcacaaaatggactatgacaCCATGTGTTTACACAGAAAGAAAAAAATATCATAcggtaattgctcctaaatatgcagagaatatgttctgatatccttagtggatgcctgaaactgcagatagtaccaaaccttatatatactatgttttttttcccatacatatgcatgttaaagtttataagttaggcagagtaagatatgaacaataactaataatgaaatagaaacgtaacgatgtgctgtaataaaagttatgtgactgacgcctctttttcttcctctttctttcaaaatatcttaatattttcaagccatggataactgaaactgcagaaagtgaaactgtagataaACTATTAACTCTATTTAAACAATAAAAGAATTATAATTATATTCTTGGGAAAATTAACAATTATCCAAAGTCCCTTTGCAAAGGGAAAAAAAATGCATGTATTGGAAAAAATCTCAACCACAGGGTTCCCTAAGCTTTGCAAACAACAAATAGCATCCACCTATCCATCCTCAGAGAGCAACAGTTTTACTGTTATTTAGAAAAAGCAACTATTTC</dnaseq>| | sequence = <dnaseq>tccaacttttttttTGGTCTGTTGTTAAAAGCCCCCCTATCCCATGCCTAAGTAATAAGTAATCTCAATATTACATTCCATCTCATATAATAAAATTTGACTTCCTAAAAGGGCTTGCTTCTTTTTAATTCAATGTCAATGCTGGAATTTCAGTTCTTAGCCTTGAAACCCTGGTGAAAAAATTCTCAGCAAGGTAAGAAGGAAAAAAATGTTCTCCCCTGCTCCTGAAGCTGGAGAGAACAATAAATGAAAACTGTTGTCATAAATGGTTATTTCTAACAATTTTTCAAACCCCTAGACTTCAAATATTTTGGACAGGACCTGACAAAATGACCCTTAATCTGTAAAACATCTGTACTTTTGACCACTCATCTTTCTTAATAATTCAGTTCTCTGGTGATAATGTTTGAGCTTAAAATCTCTATCTTCAGAAGGTAACGTGATTTGTGAATTTTCTGTCAAATCAGGAAAGAATCACTGGCATTGCCCTCTTCCCACACATGCATAGGATAAAATAGCTCTACTGGACTTTTTATTAATCAAAGAGCCCGAGAGACAGCTGAATGGCTGAACCAAGCAGAGAGTGGAAACTTGGGGAGGGTAATTCCTTGCTGGGCCTTAAAAGGAGTCCACAAGATAGGAAAAAAACGAAAAAGCCAAATAAGATGAACCTCTATTCAGGCCCCAATGAGAGGCTGCTTGACTCTGATCTTTCGTTAGCTGGCTCAAAATTTTGTTCTTAAAGAATTATTTTTACTCAAAATCAAGAACTGTTAGAAAACAAGAAAAATTATGGAGTTTTGTTGTTGATTTCCACCTCTCTACATATATATATgaaatacatatctcctcccgatacacatgcacacacgcaaaaacatatttaactgaaacaacggtttcatgaaactatagttactctcattacctgtgatgcaggcaagtattttcaattgtattttattctatttcattctacttggaaaaaaagtcttttggtctcaacataaatgggttctgacctgcagtttcaaGCCAATACGTTACAGTAAGAGTAAATGTAGGGTTTCTCCCAGTTTTATCTGGCAGTCCCAAAGTCAGGATCAGAGTAACCGATGGAGCATCATTTGTACGCTCCACGTCTGAGGAGGAGGTCTGGGAAAAGATCCAACGTGTAggactggcgcagaggctcaggcctgtaatcccagcactttaagaggtggaggcgggaggataacttgaggtcaacagttcgagacaagcctggcaaacatggtgaaaccccgtctctactaaaaatacagaaattatccaggcgtggtggtgcgcacctgtagatccagctcctcgggaggctgaggcacgaaaatcgcttgaacgcgggaggcggaggttgcagtgagacaagatcacaccactgcactccagcctgggcgacagagcgagaccctgtctcaaataaaaaaaaTAATAATAATAATCCAATGTGTCCCTAGTCTGGCTTTCAGGGTCTTAGATGAGGTTCGGAAGTGGACTTAGGAGCCTTAGGAGCGCAGCCAGTGCTGTGGATTCCCACATCCACGGGACCTGCGGTTTCGGGTTATTCCATTCAGGGATACATGACGTCCCTCATTTCTACCTACCAGTGGGCTGGTCAAGATTCTCATTTATCAAGTCAGTTGGAGTGGGCTTAAGTAAGTTCTCAGCCAAGGCTGTGGGGTCTGGAGGACCAGATATCCCGACCAAAAGCCCCCCCTCCCATTCCTTTCACACGCCTGCCGCAGAGGTGCACGGGTGCGAGTGGGGAACTGAGGCAAGAAGCAGATGGGGCGGCACCGAGAGAAGAGAAACTACGCTAGAGGAAAAGCTCGAGCTGTTAcccctcccaacttcttccgccttccgccttcccccttccccctctttcccctcttgcccctctccAGCTTTTCTGGTCCAACCCTCTTCTGCGCCTAACACTGGCACCTCCTTTTCTTCCGGCTGATGAATAATTGTCCGCAAACCAGCCTCTCTGGGGCACTGAGGGGCGGGAAGGTTAGAAGGAGCCAGGGCTAGAGTCCTGGAAGGTGGCAGTCAGGTCGCAGGGCCACAGCAGTCACTCTGCGACTCTCTCTTCCGGTGTTTCTCCAGCGCCAAGCGGGAGAAGACGGAGCCTGGGAGCTGGGACTGGAGGAGCGGGAAGCGCAGTATCGGGACCACGGCTCTGGGACCAGGAAAAACGCAGACTCTCCAGAGTCAATGTCTACTTCAGCCAGCTCAAGGGCGCGACAACCTGGCGCCGAGCATCTCAGGCCGCCGCGGGGACCCCCCCTAAGGGACTCGGGAACACCTGCCTACCCTAGAAGAGGCGGAGAATAACCCCGTAGGGAGTTAAGCGGCCTCTGCCTACAGCGTTCCTCCCGCCTCCACGGCGCCGAGCCCTGATTGACGTTCAGCCAGGCCAATCATAGCCTGTGTCTGAGGCGCGCGGAGCTGGAGCGCCCAGGGCATGTCCGCCGATCCCAAGGAGGCAATCTGTCAGGCGCCGCCCGGGCGGCAGTATGCCTGAGGGGGTCCTCCGTGTTCGCGCCTCCCGCCGCCTGCACTGAAAGGTCTGTACCTGAGCCTGGATACTTGAACAGAGGCAGACACTGCGGCTCAAAACCCCAAGGaatatcctagctctgagacaaaaattgggaacctcagcatgagtttgtcacctgaatgaaataaaaaaaatcacgttgaaggctggtgcagtaacatgtgcctgtagtcccagctactctggaggctgagtcaggaggatcacttgagaccagaagttcaggaattcaagactggcttgagcaacatagcaagacttcatttcaaaacaaacagaaaaaagccaccaccttcagtatttcttgccaaagcaaaggagccatttgttctttacgatggtcaggaaaggaagcatcaaggtcatcaaatgaaaaattttcagcatttcagcctctctgctcagggaaatatctgaatctagaatatcacaacatgagccaaaaccgccccatttctcatgccacatgtcactcttaacacaaggttactcaacctcgagcatggttggcatttggggctgaataattcttttttgtagggggctgtcctgggcattgtaggatgctcatgagctacctcagtctctaccacccactagatgccagtagcattgacccctgatctctctacccaagttgtgacaactaaaaccatctctggataatggaggaaccttaaatgcatattgctaaggaaaagccaatctgaaaggattacatattgtatgagtccaactatatggtaatctggaaaaggcaaaaccatggagacagtgaaaaggtagtggttaccagtggtccatgggaagggttggatgaataggtggagcacagaggatttttaaggcagtgaaactattctgaatgatactgtaatggtggatacatgtcatacctttgtcaaaaccaataaaatataacaaccaataaaactgcacaaagagtgaaccctaatgtaaactatggacttaataatgtatcaatattggctcaccaattttaacaaatgtaccacactaatgcaagatgttactaatagtggaaactggagggaagagggcttgaggggacatacgggaactctctgtaattcctgttcagtttttctgtaactgttaaactgtccaaaaaaagtctgttTTTATAAATGGAGGCATGGTTTTATATGGACTAAAATACTATGATTGCCTTTTTATTTTACACATGGTGAAATTAGAGCAGGACATATTTTAAACTCAAAATTCACAAAATTAATTTATGAAAATGTTTACCCAGATCAAGAATATTAAAGAAACTTAGATTAATATTGTTACCTTGAATTTATTTTACTGAGTAATCCTCTAAGACTCCTCTACACATTATTAATCTAGAAGGATTTTTAAAGTCTTTATGACAATTAATTATTGGTCTACAGTCAAATTGCGTATCCCCATTAACTAGAGTTATATTTTTCCATTTTCTGATCCAAAAACTTTAGGAACAGGAAATGTTTATTTTAGAAAACAAGAACACTTCTTAAGCATTTGCTGTTAACAGTTATTTTCACATGTGCTTGTACTTATTTTACACTTGTCAGAACATAGTATTTACCTTTGAACCAAGGTTTTATAATAAGCAAGCACTTTTTTTATTTAGAAGTCACATTTTCCAAGTAGAAAAATCATTAAAAATTCAGTCCTCTGAAGGCTAATTTCTTTAAATCATTTAACCTAATTGTTTAAGGTATAGATTGGAATTTTTCTCAGCACTCTCTTGAAAACAGGTGACAGTGGAACCCTGTTAGGTTCACAAATCCTAGACTTTGATTATATAGCCCAGGCTCAAATTTTTCTCGAATGTTACGAACATTCAAAGCATTAGGAGTCTTGGTTTCATTTCTTAATTTTTTTTCTTCTGGGTATATTTGAGACTCATCTTGGATTCAAATAAATTAATAATAGTCTCATGAAACCGATAAAAATGGGAGCTCCATTGAACATGAGAGACATTGATTCGTAGTTTCTAACATCCTCCAAATGAGGAGCCCATCCCTAATTTAGATGCTTCTTTCAAAGGAGGCTCCTTTCCTTCGTTATCCATAATATAGTCACACCAGTCCTGAAAAAACATGGAACAGACTCCAGATCTTTATATTTCATACTCTAAAGTCGTACAAGCCAATCTGCATTTCCTCTAGTGGAAACTGTATAGCTGGTCATCTTTCCAGGACCCTTTTATCAAGAAACAATGCAGCTTCTACATTTGTGCTGCTTCTACACCAAAACAGCTGGAATGTATATAGTATGGTTCTGGATGCTCTTGTATACCTCACTCTTCATTTCTCACCTAACCCATGtgctatgatttgaatgtttctcccctgcaaaactcatgttgaaatgtaattgccatgataacagtattaataggtggaatatttaagaggtgattagggtgggattggtgatgttataaaagggtaagttcagccccttcttgctctctctgtcacccttccaccttcctctgtgtgatgatgcaacaaaaaagcccttcccagatgccagcatcttgattttggacttctcagcctacagaactataagccaataaatttctgttatttgttattagtctgtgatattctgttacagtagcacaaaatggactatgacaCCATGTGTTTACACAGAAAGAAAAAAATATCATAcggtaattgctcctaaatatgcagagaatatgttctgatatccttagtggatgcctgaaactgcagatagtaccaaaccttatatatactatgttttttttcccatacatatgcatgttaaagtttataagttaggcagagtaagatatgaacaataactaataatgaaatagaaacgtaacgatgtgctgtaataaaagttatgtgactgacgcctctttttcttcctctttctttcaaaatatcttaatattttcaagccatggataactgaaactgcagaaagtgaaactgtagataaACTATTAACTCTATTTAAACAATAAAAGAATTATAATTATATTCTTGGGAAAATTAACAATTATCCAAAGTCCCTTTGCAAAGGGAAAAAAAATGCATGTATTGGAAAAAATCTCAACCACAGGGTTCCCTAAGCTTTGCAAACAACAAATAGCATCCACCTATCCATCCTCAGAGAGCAACAGTTTTACTGTTATTTAGAAAAAGCAACTATTTC</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG043577]][[Category:Transcripts]] |
Latest revision as of 01:50, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT108944 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
5818 nt |
Genomic location |
chr6+:32860030..32871839 |
Exon number |
2 |
Exons |
32860030..32862704,32868697..32871839 |
Genome context |
|
Sequence |
000001 tccaactttt ttttTGGTCT GTTGTTAAAA GCCCCCCTAT CCCATGCCTA AGTAATAAGT AATCTCAATA TTACATTCCA 000080
000081 TCTCATATAA TAAAATTTGA CTTCCTAAAA GGGCTTGCTT CTTTTTAATT CAATGTCAAT GCTGGAATTT CAGTTCTTAG 000160 000161 CCTTGAAACC CTGGTGAAAA AATTCTCAGC AAGGTAAGAA GGAAAAAAAT GTTCTCCCCT GCTCCTGAAG CTGGAGAGAA 000240 000241 CAATAAATGA AAACTGTTGT CATAAATGGT TATTTCTAAC AATTTTTCAA ACCCCTAGAC TTCAAATATT TTGGACAGGA 000320 000321 CCTGACAAAA TGACCCTTAA TCTGTAAAAC ATCTGTACTT TTGACCACTC ATCTTTCTTA ATAATTCAGT TCTCTGGTGA 000400 000401 TAATGTTTGA GCTTAAAATC TCTATCTTCA GAAGGTAACG TGATTTGTGA ATTTTCTGTC AAATCAGGAA AGAATCACTG 000480 000481 GCATTGCCCT CTTCCCACAC ATGCATAGGA TAAAATAGCT CTACTGGACT TTTTATTAAT CAAAGAGCCC GAGAGACAGC 000560 000561 TGAATGGCTG AACCAAGCAG AGAGTGGAAA CTTGGGGAGG GTAATTCCTT GCTGGGCCTT AAAAGGAGTC CACAAGATAG 000640 000641 GAAAAAAACG AAAAAGCCAA ATAAGATGAA CCTCTATTCA GGCCCCAATG AGAGGCTGCT TGACTCTGAT CTTTCGTTAG 000720 000721 CTGGCTCAAA ATTTTGTTCT TAAAGAATTA TTTTTACTCA AAATCAAGAA CTGTTAGAAA ACAAGAAAAA TTATGGAGTT 000800 000801 TTGTTGTTGA TTTCCACCTC TCTACATATA TATATgaaat acatatctcc tcccgataca catgcacaca cgcaaaaaca 000880 000881 tatttaactg aaacaacggt ttcatgaaac tatagttact ctcattacct gtgatgcagg caagtatttt caattgtatt 000960 000961 ttattctatt tcattctact tggaaaaaaa gtcttttggt ctcaacataa atgggttctg acctgcagtt tcaaGCCAAT 001040 001041 ACGTTACAGT AAGAGTAAAT GTAGGGTTTC TCCCAGTTTT ATCTGGCAGT CCCAAAGTCA GGATCAGAGT AACCGATGGA 001120 001121 GCATCATTTG TACGCTCCAC GTCTGAGGAG GAGGTCTGGG AAAAGATCCA ACGTGTAgga ctggcgcaga ggctcaggcc 001200 001201 tgtaatccca gcactttaag aggtggaggc gggaggataa cttgaggtca acagttcgag acaagcctgg caaacatggt 001280 001281 gaaaccccgt ctctactaaa aatacagaaa ttatccaggc gtggtggtgc gcacctgtag atccagctcc tcgggaggct 001360 001361 gaggcacgaa aatcgcttga acgcgggagg cggaggttgc agtgagacaa gatcacacca ctgcactcca gcctgggcga 001440 001441 cagagcgaga ccctgtctca aataaaaaaa aTAATAATAA TAATCCAATG TGTCCCTAGT CTGGCTTTCA GGGTCTTAGA 001520 001521 TGAGGTTCGG AAGTGGACTT AGGAGCCTTA GGAGCGCAGC CAGTGCTGTG GATTCCCACA TCCACGGGAC CTGCGGTTTC 001600 001601 GGGTTATTCC ATTCAGGGAT ACATGACGTC CCTCATTTCT ACCTACCAGT GGGCTGGTCA AGATTCTCAT TTATCAAGTC 001680 001681 AGTTGGAGTG GGCTTAAGTA AGTTCTCAGC CAAGGCTGTG GGGTCTGGAG GACCAGATAT CCCGACCAAA AGCCCCCCCT 001760 001761 CCCATTCCTT TCACACGCCT GCCGCAGAGG TGCACGGGTG CGAGTGGGGA ACTGAGGCAA GAAGCAGATG GGGCGGCACC 001840 001841 GAGAGAAGAG AAACTACGCT AGAGGAAAAG CTCGAGCTGT TAcccctccc aacttcttcc gccttccgcc ttcccccttc 001920 001921 cccctctttc ccctcttgcc cctctccAGC TTTTCTGGTC CAACCCTCTT CTGCGCCTAA CACTGGCACC TCCTTTTCTT 002000 002001 CCGGCTGATG AATAATTGTC CGCAAACCAG CCTCTCTGGG GCACTGAGGG GCGGGAAGGT TAGAAGGAGC CAGGGCTAGA 002080 002081 GTCCTGGAAG GTGGCAGTCA GGTCGCAGGG CCACAGCAGT CACTCTGCGA CTCTCTCTTC CGGTGTTTCT CCAGCGCCAA 002160 002161 GCGGGAGAAG ACGGAGCCTG GGAGCTGGGA CTGGAGGAGC GGGAAGCGCA GTATCGGGAC CACGGCTCTG GGACCAGGAA 002240 002241 AAACGCAGAC TCTCCAGAGT CAATGTCTAC TTCAGCCAGC TCAAGGGCGC GACAACCTGG CGCCGAGCAT CTCAGGCCGC 002320 002321 CGCGGGGACC CCCCCTAAGG GACTCGGGAA CACCTGCCTA CCCTAGAAGA GGCGGAGAAT AACCCCGTAG GGAGTTAAGC 002400 002401 GGCCTCTGCC TACAGCGTTC CTCCCGCCTC CACGGCGCCG AGCCCTGATT GACGTTCAGC CAGGCCAATC ATAGCCTGTG 002480 002481 TCTGAGGCGC GCGGAGCTGG AGCGCCCAGG GCATGTCCGC CGATCCCAAG GAGGCAATCT GTCAGGCGCC GCCCGGGCGG 002560 002561 CAGTATGCCT GAGGGGGTCC TCCGTGTTCG CGCCTCCCGC CGCCTGCACT GAAAGGTCTG TACCTGAGCC TGGATACTTG 002640 002641 AACAGAGGCA GACACTGCGG CTCAAAACCC CAAGGaatat cctagctctg agacaaaaat tgggaacctc agcatgagtt 002720 002721 tgtcacctga atgaaataaa aaaaatcacg ttgaaggctg gtgcagtaac atgtgcctgt agtcccagct actctggagg 002800 002801 ctgagtcagg aggatcactt gagaccagaa gttcaggaat tcaagactgg cttgagcaac atagcaagac ttcatttcaa 002880 002881 aacaaacaga aaaaagccac caccttcagt atttcttgcc aaagcaaagg agccatttgt tctttacgat ggtcaggaaa 002960 002961 ggaagcatca aggtcatcaa atgaaaaatt ttcagcattt cagcctctct gctcagggaa atatctgaat ctagaatatc 003040 003041 acaacatgag ccaaaaccgc cccatttctc atgccacatg tcactcttaa cacaaggtta ctcaacctcg agcatggttg 003120 003121 gcatttgggg ctgaataatt cttttttgta gggggctgtc ctgggcattg taggatgctc atgagctacc tcagtctcta 003200 003201 ccacccacta gatgccagta gcattgaccc ctgatctctc tacccaagtt gtgacaacta aaaccatctc tggataatgg 003280 003281 aggaacctta aatgcatatt gctaaggaaa agccaatctg aaaggattac atattgtatg agtccaacta tatggtaatc 003360 003361 tggaaaaggc aaaaccatgg agacagtgaa aaggtagtgg ttaccagtgg tccatgggaa gggttggatg aataggtgga 003440 003441 gcacagagga tttttaaggc agtgaaacta ttctgaatga tactgtaatg gtggatacat gtcatacctt tgtcaaaacc 003520 003521 aataaaatat aacaaccaat aaaactgcac aaagagtgaa ccctaatgta aactatggac ttaataatgt atcaatattg 003600 003601 gctcaccaat tttaacaaat gtaccacact aatgcaagat gttactaata gtggaaactg gagggaagag ggcttgaggg 003680 003681 gacatacggg aactctctgt aattcctgtt cagtttttct gtaactgtta aactgtccaa aaaaagtctg ttTTTATAAA 003760 003761 TGGAGGCATG GTTTTATATG GACTAAAATA CTATGATTGC CTTTTTATTT TACACATGGT GAAATTAGAG CAGGACATAT 003840 003841 TTTAAACTCA AAATTCACAA AATTAATTTA TGAAAATGTT TACCCAGATC AAGAATATTA AAGAAACTTA GATTAATATT 003920 003921 GTTACCTTGA ATTTATTTTA CTGAGTAATC CTCTAAGACT CCTCTACACA TTATTAATCT AGAAGGATTT TTAAAGTCTT 004000 004001 TATGACAATT AATTATTGGT CTACAGTCAA ATTGCGTATC CCCATTAACT AGAGTTATAT TTTTCCATTT TCTGATCCAA 004080 004081 AAACTTTAGG AACAGGAAAT GTTTATTTTA GAAAACAAGA ACACTTCTTA AGCATTTGCT GTTAACAGTT ATTTTCACAT 004160 004161 GTGCTTGTAC TTATTTTACA CTTGTCAGAA CATAGTATTT ACCTTTGAAC CAAGGTTTTA TAATAAGCAA GCACTTTTTT 004240 004241 TATTTAGAAG TCACATTTTC CAAGTAGAAA AATCATTAAA AATTCAGTCC TCTGAAGGCT AATTTCTTTA AATCATTTAA 004320 004321 CCTAATTGTT TAAGGTATAG ATTGGAATTT TTCTCAGCAC TCTCTTGAAA ACAGGTGACA GTGGAACCCT GTTAGGTTCA 004400 004401 CAAATCCTAG ACTTTGATTA TATAGCCCAG GCTCAAATTT TTCTCGAATG TTACGAACAT TCAAAGCATT AGGAGTCTTG 004480 004481 GTTTCATTTC TTAATTTTTT TTCTTCTGGG TATATTTGAG ACTCATCTTG GATTCAAATA AATTAATAAT AGTCTCATGA 004560 004561 AACCGATAAA AATGGGAGCT CCATTGAACA TGAGAGACAT TGATTCGTAG TTTCTAACAT CCTCCAAATG AGGAGCCCAT 004640 004641 CCCTAATTTA GATGCTTCTT TCAAAGGAGG CTCCTTTCCT TCGTTATCCA TAATATAGTC ACACCAGTCC TGAAAAAACA 004720 004721 TGGAACAGAC TCCAGATCTT TATATTTCAT ACTCTAAAGT CGTACAAGCC AATCTGCATT TCCTCTAGTG GAAACTGTAT 004800 004801 AGCTGGTCAT CTTTCCAGGA CCCTTTTATC AAGAAACAAT GCAGCTTCTA CATTTGTGCT GCTTCTACAC CAAAACAGCT 004880 004881 GGAATGTATA TAGTATGGTT CTGGATGCTC TTGTATACCT CACTCTTCAT TTCTCACCTA ACCCATGtgc tatgatttga 004960 004961 atgtttctcc cctgcaaaac tcatgttgaa atgtaattgc catgataaca gtattaatag gtggaatatt taagaggtga 005040 005041 ttagggtggg attggtgatg ttataaaagg gtaagttcag ccccttcttg ctctctctgt cacccttcca ccttcctctg 005120 005121 tgtgatgatg caacaaaaaa gcccttccca gatgccagca tcttgatttt ggacttctca gcctacagaa ctataagcca 005200 005201 ataaatttct gttatttgtt attagtctgt gatattctgt tacagtagca caaaatggac tatgacaCCA TGTGTTTACA 005280 005281 CAGAAAGAAA AAAATATCAT Acggtaattg ctcctaaata tgcagagaat atgttctgat atccttagtg gatgcctgaa 005360 005361 actgcagata gtaccaaacc ttatatatac tatgtttttt ttcccataca tatgcatgtt aaagtttata agttaggcag 005440 005441 agtaagatat gaacaataac taataatgaa atagaaacgt aacgatgtgc tgtaataaaa gttatgtgac tgacgcctct 005520 005521 ttttcttcct ctttctttca aaatatctta atattttcaa gccatggata actgaaactg cagaaagtga aactgtagat 005600 005601 aaACTATTAA CTCTATTTAA ACAATAAAAG AATTATAATT ATATTCTTGG GAAAATTAAC AATTATCCAA AGTCCCTTTG 005680 005681 CAAAGGGAAA AAAAATGCAT GTATTGGAAA AAATCTCAAC CACAGGGTTC CCTAAGCTTT GCAAACAACA AATAGCATCC 005760 005761 ACCTATCCAT CCTCAGAGAG CAACAGTTTT ACTGTTATTT AGAAAAAGCA ACTATTTC |
Predicted Small Protein
Name | NONHSAT108944_smProtein_563:742 |
Length | 60 |
Molecular weight | 6608.4999 |
Aromaticity | 0.0508474576271 |
Instability index | 50.7694915254 |
Isoelectric point | 9.72857666016 |
Runs | 7 |
Runs residual | 0.0258124708443 |
Runs probability | 0.0375753905166 |
Amino acid sequence | MAEPSREWKLGEGNSLLGLKRSPQDRKKTKKPNKMNLYSGPNERLLDSDLSLAGSKFCS |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLHHHHHLLLLLLLLEELLLLLLEELLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |