Difference between revisions of "NONHSAT112721"
Line 42: | Line 42: | ||
sequence = <dnaseq>TACAGCTCCCTCCAGCCCTTCTGAGTCTAAAACACATTCCAATTCCTCTGTTTTCCAGGCTTATTTTGCCATCAGTAACTCCTTCCTGTTCCCCCAGCCATGAGTGAATATGCTGAATGAGGACCTTTTACTGTAAGGAGTTCTTCTCTCAATGTGTGACCTGCCCTGTCTATCACCAGTGGGTATCTGAGCTTAAGGCCTCTGTAATGAGATGTGAAAAGAGAGAATTGATGTCCCTGACTAACAGCATCAGACCTTTTGACACCTGCTTGACCAGGATTTGGATAAAAGGAGAATTTCTGCAGGAAAATAACTCTTAGAAAAGAAACTTAGGAATACAGAGTAAGCATTTCTTCCTGGAAGCCTTGTGTGAGAGACATAAAGACAGTCTCAGATTCTTACTCACAAGCAGTCAAAGGCTGCACCTCTGAAATAAAAAGGGACACACAGATGTAAGGAGTTAGTCCTTGCTCCAGAGGATTTGACAGAGTGGCTGATGTCAAGGAGAACAAGGATGCAGAAGAAACTCAAGATGTATGTATTAAAACAAAAGAACAATAACCTGAAGGGACCATGATTCTGTTATTGTATATAACACAAGGAAATGCCCCAGATTCTCCTTTAAAAGATATAATGTACATATTAA</dnaseq>| | sequence = <dnaseq>TACAGCTCCCTCCAGCCCTTCTGAGTCTAAAACACATTCCAATTCCTCTGTTTTCCAGGCTTATTTTGCCATCAGTAACTCCTTCCTGTTCCCCCAGCCATGAGTGAATATGCTGAATGAGGACCTTTTACTGTAAGGAGTTCTTCTCTCAATGTGTGACCTGCCCTGTCTATCACCAGTGGGTATCTGAGCTTAAGGCCTCTGTAATGAGATGTGAAAAGAGAGAATTGATGTCCCTGACTAACAGCATCAGACCTTTTGACACCTGCTTGACCAGGATTTGGATAAAAGGAGAATTTCTGCAGGAAAATAACTCTTAGAAAAGAAACTTAGGAATACAGAGTAAGCATTTCTTCCTGGAAGCCTTGTGTGAGAGACATAAAGACAGTCTCAGATTCTTACTCACAAGCAGTCAAAGGCTGCACCTCTGAAATAAAAAGGGACACACAGATGTAAGGAGTTAGTCCTTGCTCCAGAGGATTTGACAGAGTGGCTGATGTCAAGGAGAACAAGGATGCAGAAGAAACTCAAGATGTATGTATTAAAACAAAAGAACAATAACCTGAAGGGACCATGATTCTGTTATTGTATATAACACAAGGAAATGCCCCAGATTCTCCTTTAAAAGATATAATGTACATATTAA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:NONHSAG043757]] | + | [[Category:Intergenic]][[Category:NONHSAG043757]][[Category:Transcripts]] |
Latest revision as of 01:52, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT112721 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
646 nt |
Genomic location |
chr6+:41107390..41108503 |
Exon number |
3 |
Exons |
41107390..41107517,41107594..41107943,41108336..41108503 |
Genome context |
|
Sequence |
000001 TACAGCTCCC TCCAGCCCTT CTGAGTCTAA AACACATTCC AATTCCTCTG TTTTCCAGGC TTATTTTGCC ATCAGTAACT 000080
000081 CCTTCCTGTT CCCCCAGCCA TGAGTGAATA TGCTGAATGA GGACCTTTTA CTGTAAGGAG TTCTTCTCTC AATGTGTGAC 000160 000161 CTGCCCTGTC TATCACCAGT GGGTATCTGA GCTTAAGGCC TCTGTAATGA GATGTGAAAA GAGAGAATTG ATGTCCCTGA 000240 000241 CTAACAGCAT CAGACCTTTT GACACCTGCT TGACCAGGAT TTGGATAAAA GGAGAATTTC TGCAGGAAAA TAACTCTTAG 000320 000321 AAAAGAAACT TAGGAATACA GAGTAAGCAT TTCTTCCTGG AAGCCTTGTG TGAGAGACAT AAAGACAGTC TCAGATTCTT 000400 000401 ACTCACAAGC AGTCAAAGGC TGCACCTCTG AAATAAAAAG GGACACACAG ATGTAAGGAG TTAGTCCTTG CTCCAGAGGA 000480 000481 TTTGACAGAG TGGCTGATGT CAAGGAGAAC AAGGATGCAG AAGAAACTCA AGATGTATGT ATTAAAACAA AAGAACAATA 000560 000561 ACCTGAAGGG ACCATGATTC TGTTATTGTA TATAACACAA GGAAATGCCC CAGATTCTCC TTTAAAAGAT ATAATGTACA 000640 000641 TATTAA |
Predicted Small Protein
Name | NONHSAT112721_smProtein_116:319 |
Length | 68 |
Molecular weight | 8061.3045 |
Aromaticity | 0.134328358209 |
Instability index | 41.953880597 |
Isoelectric point | 8.35028076172 |
Runs | 12 |
Runs residual | 0.0357896381965 |
Runs probability | 0.0485706294531 |
Amino acid sequence | MRTFYCKEFFSQCVTCPVYHQWVSELKASVMRCEKRELMSLTNSIRPFDTCLTRIWIKGE FLQENNS |
Secondary structure | LLEEEHHHHHLLEELLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLEEEEEEELL EELLLLL |
PRMN | - |
PiMo | - |