Difference between revisions of "NONHSAT112833"
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sequence = <dnaseq>ACGCCGGTGTGCGAGCCACGGCCCAGCAGCCCCGACTATTCATGGGCATGATCCTGATCCTCATCTTCCCCGAGGTGCTCGGCCTGTACGGTCTCGTCGTTGCCCTCATCCTCTCCACAGAGTAGCCCCTCTCCGAGCCCACCAGCCACCGAATATGATGTAAAAACCACCCCTCCTCATTCCAGAACGAAGAGCCTGACACACACGCACGGGACCGCGGCCCCCAGTAGTTGATCTTGTACATGCGCAGCGCAGCGTCCTAGTGCCGGTTGTCTGTTGCCCTGGCCTTGCCCCCACCCCACCCCCCACGCCGCCCCGTGCCATGGACATCTGGGTCCACTCATCGCCCCTCCAGGCCCCCGGTGCCCCACCCCCTAGAGTGCTCTGTGTATTCGGATGACTTAGAGTTGTCATTTCTCTTCACTGGATGTTTATTTATAAAGATCTGGCCTGTTCCCGCGTCTGCGGAGAGGCCCTGGTCTCCCAGCTGTCTATAACCTTAGCTAGAGTGTGGCCTTGTGGGCTCCTGTTGCTGAGACCTCCTGGATGGAGCTGCCCTCGCCACCGGGCCCTTGGCCCTGCACGGAGCTCTGTCCAATAAAGTTCTCGGATTTGGGGG</dnaseq>| | sequence = <dnaseq>ACGCCGGTGTGCGAGCCACGGCCCAGCAGCCCCGACTATTCATGGGCATGATCCTGATCCTCATCTTCCCCGAGGTGCTCGGCCTGTACGGTCTCGTCGTTGCCCTCATCCTCTCCACAGAGTAGCCCCTCTCCGAGCCCACCAGCCACCGAATATGATGTAAAAACCACCCCTCCTCATTCCAGAACGAAGAGCCTGACACACACGCACGGGACCGCGGCCCCCAGTAGTTGATCTTGTACATGCGCAGCGCAGCGTCCTAGTGCCGGTTGTCTGTTGCCCTGGCCTTGCCCCCACCCCACCCCCCACGCCGCCCCGTGCCATGGACATCTGGGTCCACTCATCGCCCCTCCAGGCCCCCGGTGCCCCACCCCCTAGAGTGCTCTGTGTATTCGGATGACTTAGAGTTGTCATTTCTCTTCACTGGATGTTTATTTATAAAGATCTGGCCTGTTCCCGCGTCTGCGGAGAGGCCCTGGTCTCCCAGCTGTCTATAACCTTAGCTAGAGTGTGGCCTTGTGGGCTCCTGTTGCTGAGACCTCCTGGATGGAGCTGCCCTCGCCACCGGGCCCTTGGCCCTGCACGGAGCTCTGTCCAATAAAGTTCTCGGATTTGGGGG</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:NONHSAG043789]] | + | [[Category:Intergenic]][[Category:NONHSAG043789]][[Category:Transcripts]] |
Latest revision as of 01:52, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT112833 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
619 nt |
Genomic location |
chr6+:42695314..42695932 |
Exon number |
1 |
Exons |
42695314..42695932 |
Genome context |
|
Sequence |
000001 ACGCCGGTGT GCGAGCCACG GCCCAGCAGC CCCGACTATT CATGGGCATG ATCCTGATCC TCATCTTCCC CGAGGTGCTC 000080
000081 GGCCTGTACG GTCTCGTCGT TGCCCTCATC CTCTCCACAG AGTAGCCCCT CTCCGAGCCC ACCAGCCACC GAATATGATG 000160 000161 TAAAAACCAC CCCTCCTCAT TCCAGAACGA AGAGCCTGAC ACACACGCAC GGGACCGCGG CCCCCAGTAG TTGATCTTGT 000240 000241 ACATGCGCAG CGCAGCGTCC TAGTGCCGGT TGTCTGTTGC CCTGGCCTTG CCCCCACCCC ACCCCCCACG CCGCCCCGTG 000320 000321 CCATGGACAT CTGGGTCCAC TCATCGCCCC TCCAGGCCCC CGGTGCCCCA CCCCCTAGAG TGCTCTGTGT ATTCGGATGA 000400 000401 CTTAGAGTTG TCATTTCTCT TCACTGGATG TTTATTTATA AAGATCTGGC CTGTTCCCGC GTCTGCGGAG AGGCCCTGGT 000480 000481 CTCCCAGCTG TCTATAACCT TAGCTAGAGT GTGGCCTTGT GGGCTCCTGT TGCTGAGACC TCCTGGATGG AGCTGCCCTC 000560 000561 GCCACCGGGC CCTTGGCCCT GCACGGAGCT CTGTCCAATA AAGTTCTCGG ATTTGGGGG |
Predicted Small Protein
Name | NONHSAT112833_smProtein_41:124 |
Length | 28 |
Molecular weight | 2918.6371 |
Aromaticity | 0.0740740740741 |
Instability index | 48.5888888889 |
Isoelectric point | 4.23956298828 |
Runs | 6 |
Runs residual | 0.0155662909286 |
Runs probability | 0.0175616793264 |
Amino acid sequence | MGMILILIFPEVLGLYGLVVALILSTE |
Secondary structure | LLEEEEEELHHHHHHHHHHHHEEELLL |
PRMN | LLHHHHHHHHHHHHHHHHHHHHLLLLL |
PiMo | i?????????????????????????? |