Difference between revisions of "NONHSAT114108"
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==Annotated Information==
===Transcriptomic Nomeclature===
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sequence = <dnaseq>GGACCTTTTAAATTATCTCTGGTCCCTTATCCCAAAACATCTTACTGATGATTACTTCAAGAAGAAGCAGCTGAGGAAGCCCAGACACTAGGAAGGTGAGATCTTTGACACAGAAAAAGAGAAATATGAGATTGCAGAGCAGCCCAAGATTGATCAGAAAGCTGTGGACTCACAAATTTTACCAAAAATCAAAAGTATTCCTCAGCTCCAGTGCTACCTGCGATCTGTGTTTGCTCTGACGAATGGAATTTATCCTCACAAATTGGTGTTTTAAAT</dnaseq>| | sequence = <dnaseq>GGACCTTTTAAATTATCTCTGGTCCCTTATCCCAAAACATCTTACTGATGATTACTTCAAGAAGAAGCAGCTGAGGAAGCCCAGACACTAGGAAGGTGAGATCTTTGACACAGAAAAAGAGAAATATGAGATTGCAGAGCAGCCCAAGATTGATCAGAAAGCTGTGGACTCACAAATTTTACCAAAAATCAAAAGTATTCCTCAGCTCCAGTGCTACCTGCGATCTGTGTTTGCTCTGACGAATGGAATTTATCCTCACAAATTGGTGTTTTAAAT</dnaseq>| | ||
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| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG044428]][[Category:Transcripts]] |
Latest revision as of 01:58, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT114108 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
276 nt |
| Genomic location |
chr6-:99228133..99241868 |
| Exon number |
2 |
| Exons |
99228133..99228380,99241841..99241868 |
| Genome context |
|
| Sequence |
000001 GGACCTTTTA AATTATCTCT GGTCCCTTAT CCCAAAACAT CTTACTGATG ATTACTTCAA GAAGAAGCAG CTGAGGAAGC 000080
000081 CCAGACACTA GGAAGGTGAG ATCTTTGACA CAGAAAAAGA GAAATATGAG ATTGCAGAGC AGCCCAAGAT TGATCAGAAA 000160 000161 GCTGTGGACT CACAAATTTT ACCAAAAATC AAAAGTATTC CTCAGCTCCA GTGCTACCTG CGATCTGTGT TTGCTCTGAC 000240 000241 GAATGGAATT TATCCTCACA AATTGGTGTT TTAAAT |
Predicted Small Protein
| Name | NONHSAT114108_smProtein_125:238 |
| Length | 38 |
| Molecular weight | 4386.2157 |
| Aromaticity | 0.108108108108 |
| Instability index | 77.202972973 |
| Isoelectric point | 10.2022094727 |
| Runs | 5 |
| Runs residual | 0.0446317877511 |
| Runs probability | 0.0422893481718 |
| Amino acid sequence | MRLQSSPRLIRKLWTHKFYQKSKVFLSSSATCDLCLL |
| Secondary structure | LLLLLLHHHHHHHHHHHHHHHLLEEELLLLLLLLLLL |
| PRMN | - |
| PiMo | - |
