Difference between revisions of "NONHSAT136964"
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sequence = <dnaseq>GAGGAGCTGGGCCTTGCCGGGCGCTGCCTCACCCTGACACCGCGCCCTGCCACAGAGGCTGAGCTGCTCACCTGTCACAGTGCTGAGTACGTGGGTCATCTCCGGGCCACAGAGAAAATGAAAACCCGGGAGCTGCACCGTGAGAGTTCCAACTTTGACTCCATCTATATCTGCCCCAGTACCTTCGCCTGTGCACAGCTTGCCACTGGCGCTGCCTGCCGCCTGGTGGAGGCTGTGCTCTCAGGAGAGGTGTGTCCTCTGTGGGCTGGGGAGAGGAGGACCTGGGGGGAATGGAAAAAGAGAGCCATCTGCTGTTTCTGGAGGCTCTGAGAGAGTCAAGCAGGGCCTGAGGAAAGGGGCCATGGGGAGGGGCACGGGAGGGGGTGGGCCTAGAGGCTGGGGGAATAATGGAAGGAACTGGAGAAAGGGAAGGGTGgccaagtgcagtggctcacgtctgtaatcctagcgctttgagaagctgaggtgagctcaggaggtcaaggctgcagtaagccatgattgcaccactgcactctagcctgggcaacagagtgagaccctgtgtc</dnaseq>| | sequence = <dnaseq>GAGGAGCTGGGCCTTGCCGGGCGCTGCCTCACCCTGACACCGCGCCCTGCCACAGAGGCTGAGCTGCTCACCTGTCACAGTGCTGAGTACGTGGGTCATCTCCGGGCCACAGAGAAAATGAAAACCCGGGAGCTGCACCGTGAGAGTTCCAACTTTGACTCCATCTATATCTGCCCCAGTACCTTCGCCTGTGCACAGCTTGCCACTGGCGCTGCCTGCCGCCTGGTGGAGGCTGTGCTCTCAGGAGAGGTGTGTCCTCTGTGGGCTGGGGAGAGGAGGACCTGGGGGGAATGGAAAAAGAGAGCCATCTGCTGTTTCTGGAGGCTCTGAGAGAGTCAAGCAGGGCCTGAGGAAAGGGGCCATGGGGAGGGGCACGGGAGGGGGTGGGCCTAGAGGCTGGGGGAATAATGGAAGGAACTGGAGAAAGGGAAGGGTGgccaagtgcagtggctcacgtctgtaatcctagcgctttgagaagctgaggtgagctcaggaggtcaaggctgcagtaagccatgattgcaccactgcactctagcctgggcaacagagtgagaccctgtgtc</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG054437]] | + | [[Category:Sense]][[Category:NONHSAG054437]][[Category:Transcripts]] |
Latest revision as of 02:43, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT136964 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
569 nt |
| Genomic location |
chrX+:48674597..48675360 |
| Exon number |
2 |
| Exons |
48674597..48674676,48674872..48675360 |
| Genome context |
|
| Sequence |
000001 GAGGAGCTGG GCCTTGCCGG GCGCTGCCTC ACCCTGACAC CGCGCCCTGC CACAGAGGCT GAGCTGCTCA CCTGTCACAG 000080
000081 TGCTGAGTAC GTGGGTCATC TCCGGGCCAC AGAGAAAATG AAAACCCGGG AGCTGCACCG TGAGAGTTCC AACTTTGACT 000160 000161 CCATCTATAT CTGCCCCAGT ACCTTCGCCT GTGCACAGCT TGCCACTGGC GCTGCCTGCC GCCTGGTGGA GGCTGTGCTC 000240 000241 TCAGGAGAGG TGTGTCCTCT GTGGGCTGGG GAGAGGAGGA CCTGGGGGGA ATGGAAAAAG AGAGCCATCT GCTGTTTCTG 000320 000321 GAGGCTCTGA GAGAGTCAAG CAGGGCCTGA GGAAAGGGGC CATGGGGAGG GGCACGGGAG GGGGTGGGCC TAGAGGCTGG 000400 000401 GGGAATAATG GAAGGAACTG GAGAAAGGGA AGGGTGgcca agtgcagtgg ctcacgtctg taatcctagc gctttgagaa 000480 000481 gctgaggtga gctcaggagg tcaaggctgc agtaagccat gattgcacca ctgcactcta gcctgggcaa cagagtgaga 000560 000561 ccctgtgtc |
Predicted Small Protein
| Name | NONHSAT136964_smProtein_407:484 |
| Length | 26 |
| Molecular weight | 2641.8928 |
| Aromaticity | 0.04 |
| Instability index | 40.868 |
| Isoelectric point | 5.47796630859 |
| Runs | 4 |
| Runs residual | 0.0483018867925 |
| Runs probability | 0.0355944179474 |
| Amino acid sequence | MEGTGEREGWPSAVAHVCNPSALRS |
| Secondary structure | LLLLLLLLLLHHHEEEELLLLLLLL |
| PRMN | - |
| PiMo | - |
