Difference between revisions of "NONHSAT137918"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>AACTGAGTGGCTGTGAAAGGGTGGGGTTTGCTCAGACTGTCCTTCCTCTCTGGACTGTAAGAATATGTCTCCAGGGCCAGTGTCTGCTGCGATCGAGTCCCACCTTCCAAGTCCTGGCATCTCAATGCATCTGGGAAGCTACCTGCATTAAGTCAGGACTGAGAAAGCAGATGAGCGTCCCACTTTCAAAATTCTTCTGAGCAATATTCTAGATGTCATGGATGAAGAATCCTGAGCTCGCCAATAAGCTTCTTGGTTCTACTTCTCTTCTCCACAAGCCCCAATTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCCCGAGAGAATTAAGACAGACTGAATTTGCGATGAAAATATTTTTTAGGAGGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATAAAGATGGGAGGGGAGGGTGTTTTGATAAAATAAAATTACTAGAAAGCTTGAAAGTC</dnaseq>| | sequence = <dnaseq>AACTGAGTGGCTGTGAAAGGGTGGGGTTTGCTCAGACTGTCCTTCCTCTCTGGACTGTAAGAATATGTCTCCAGGGCCAGTGTCTGCTGCGATCGAGTCCCACCTTCCAAGTCCTGGCATCTCAATGCATCTGGGAAGCTACCTGCATTAAGTCAGGACTGAGAAAGCAGATGAGCGTCCCACTTTCAAAATTCTTCTGAGCAATATTCTAGATGTCATGGATGAAGAATCCTGAGCTCGCCAATAAGCTTCTTGGTTCTACTTCTCTTCTCCACAAGCCCCAATTTCACTTTCTCAGAGGAAATCCCAAGCTTAGGAGCCCTGGAGCCTTTGTGCTCCCACTCAATACAAAAAGGCCCCTCTCTACATCTGGGAATGCACCTCTTCTTTGATTCCCTGGGATAGTGGCTTCTGAGCAAAGGCCAAGAAATTATTGTGCCTGAAATTTCCCGAGAGAATTAAGACAGACTGAATTTGCGATGAAAATATTTTTTAGGAGGGAGGATGTAAATAGCCGCACAAAGGGGTCCAACAGCTCTTTGAGTAGGCATTTGGTAGAGCTTGGGGGTGTGTGTGTGGGGGTGGACCGAATTTGGCAAGAATGAAATGGTGTCATAAAGATGGGAGGGGAGGGTGTTTTGATAAAATAAAATTACTAGAAAGCTTGAAAGTC</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG054970]][[Category:Transcripts]] |
Latest revision as of 02:47, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT137918 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
673 nt |
| Genomic location |
chrX-:100604435..100641212 |
| Exon number |
2 |
| Exons |
100604435..100604944,100641050..100641212 |
| Genome context |
|
| Sequence |
000001 AACTGAGTGG CTGTGAAAGG GTGGGGTTTG CTCAGACTGT CCTTCCTCTC TGGACTGTAA GAATATGTCT CCAGGGCCAG 000080
000081 TGTCTGCTGC GATCGAGTCC CACCTTCCAA GTCCTGGCAT CTCAATGCAT CTGGGAAGCT ACCTGCATTA AGTCAGGACT 000160 000161 GAGAAAGCAG ATGAGCGTCC CACTTTCAAA ATTCTTCTGA GCAATATTCT AGATGTCATG GATGAAGAAT CCTGAGCTCG 000240 000241 CCAATAAGCT TCTTGGTTCT ACTTCTCTTC TCCACAAGCC CCAATTTCAC TTTCTCAGAG GAAATCCCAA GCTTAGGAGC 000320 000321 CCTGGAGCCT TTGTGCTCCC ACTCAATACA AAAAGGCCCC TCTCTACATC TGGGAATGCA CCTCTTCTTT GATTCCCTGG 000400 000401 GATAGTGGCT TCTGAGCAAA GGCCAAGAAA TTATTGTGCC TGAAATTTCC CGAGAGAATT AAGACAGACT GAATTTGCGA 000480 000481 TGAAAATATT TTTTAGGAGG GAGGATGTAA ATAGCCGCAC AAAGGGGTCC AACAGCTCTT TGAGTAGGCA TTTGGTAGAG 000560 000561 CTTGGGGGTG TGTGTGTGGG GGTGGACCGA ATTTGGCAAG AATGAAATGG TGTCATAAAG ATGGGAGGGG AGGGTGTTTT 000640 000641 GATAAAATAA AATTACTAGA AAGCTTGAAA GTC |
Predicted Small Protein
| Name | NONHSAT137918_smProtein_212:391 |
| Length | 60 |
| Molecular weight | 6523.635 |
| Aromaticity | 0.0677966101695 |
| Instability index | 56.9084745763 |
| Isoelectric point | 11.7542114258 |
| Runs | 7 |
| Runs residual | 0.0258124708443 |
| Runs probability | 0.0473919297449 |
| Amino acid sequence | MSWMKNPELANKLLGSTSLLHKPQFHFLRGNPKLRSPGAFVLPLNTKRPLSTSGNAPLL |
| Secondary structure | LLLLLLHHHHHHHHLLLLLLLLLLEEEELLLLLLLLLLLEEELLLLLLLLLLLLLLLLL |
| PRMN | - |
| PiMo | - |
