Difference between revisions of "NONHSAT139652"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GAAAAGCACCTGGATAGCCTGATGGGCAAAATTGCCTTTCTGAAGAAATTTCACTAAGAGGAGATCCATCCACTTGCAGGGGCAGATCCAGTATGTGCAGATCTCCATAGAGATAAACATGTTCACCAATCTCAACCTCACCTCTTTGCTGGAGGTCATCTGCCCACAGTAGGGAAAGATGGCTGCCAAGAGCATGCAGAGCATGCAGAGGAGTGCTTTAAGAGCCCTTTAGACTGCTGAGCCAGAGCACTGTCAAGAGGGTCTATGCCATGCAAGGCACCAGAAACAAGGTGTCTCAGAGCCACTACCTGCTCAAGACCAAGAACTTGGAGATCAAAGCATGCTAGGGCATGAAGGAAGTAATGGAGATATAGCTGCAGGAGCCAAAGGACAAGTTGAACACCTACATCAGTAGTGTGCAGGCCATCATCCACAAATTAGAAAATGAATTGAAGATGGCAAAGTTAAACATCTGGATACCTAAATGAATACCAAGTCCTCCAGGTGAAGATGGCTCTTTGTATTGAGGCTGCAGCTCAGAGGAAACCCTTCAAAGGCAAGGAGACCCAGCTGAGTTTCAGCAGCATGGGAAGCACACTGCTTCCAGACCCCCTGGTCTTTGGTTTATCACCTACTGGGGTTCACATACCAACTCCTACATGATGTCCACCCACTCCTTCCTGTCCTACTACAGTAGCCATGTGCAAGAGGAGTAGATCATGGTGGAGGAATCCATTGAGAGTGCTAAGATTGAGGAAGGCAAAGACTAGTACCCCTCTGAAGAAAAAGCCTaggaggagaaagataataaagaggaggaggaagaggtggcagggaagaggactaagctgctaaggaagtgtctaaagaagcaaaggataaagaagaaataggtcagggtgaagaaggagaggaaaagctgaagaggaggaaaataaagttgaaggtgctggggaagaacaagcaggtaagaagaaATATTAA</dnaseq>| | sequence = <dnaseq>GAAAAGCACCTGGATAGCCTGATGGGCAAAATTGCCTTTCTGAAGAAATTTCACTAAGAGGAGATCCATCCACTTGCAGGGGCAGATCCAGTATGTGCAGATCTCCATAGAGATAAACATGTTCACCAATCTCAACCTCACCTCTTTGCTGGAGGTCATCTGCCCACAGTAGGGAAAGATGGCTGCCAAGAGCATGCAGAGCATGCAGAGGAGTGCTTTAAGAGCCCTTTAGACTGCTGAGCCAGAGCACTGTCAAGAGGGTCTATGCCATGCAAGGCACCAGAAACAAGGTGTCTCAGAGCCACTACCTGCTCAAGACCAAGAACTTGGAGATCAAAGCATGCTAGGGCATGAAGGAAGTAATGGAGATATAGCTGCAGGAGCCAAAGGACAAGTTGAACACCTACATCAGTAGTGTGCAGGCCATCATCCACAAATTAGAAAATGAATTGAAGATGGCAAAGTTAAACATCTGGATACCTAAATGAATACCAAGTCCTCCAGGTGAAGATGGCTCTTTGTATTGAGGCTGCAGCTCAGAGGAAACCCTTCAAAGGCAAGGAGACCCAGCTGAGTTTCAGCAGCATGGGAAGCACACTGCTTCCAGACCCCCTGGTCTTTGGTTTATCACCTACTGGGGTTCACATACCAACTCCTACATGATGTCCACCCACTCCTTCCTGTCCTACTACAGTAGCCATGTGCAAGAGGAGTAGATCATGGTGGAGGAATCCATTGAGAGTGCTAAGATTGAGGAAGGCAAAGACTAGTACCCCTCTGAAGAAAAAGCCTaggaggagaaagataataaagaggaggaggaagaggtggcagggaagaggactaagctgctaaggaagtgtctaaagaagcaaaggataaagaagaaataggtcagggtgaagaaggagaggaaaagctgaagaggaggaaaataaagttgaaggtgctggggaagaacaagcaggtaagaagaaATATTAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG055881]][[Category:Transcripts]] |
Latest revision as of 02:55, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT139652 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
984 nt |
| Genomic location |
chrY-:23382992..23383975 |
| Exon number |
1 |
| Exons |
23382992..23383975 |
| Genome context |
|
| Sequence |
000001 GAAAAGCACC TGGATAGCCT GATGGGCAAA ATTGCCTTTC TGAAGAAATT TCACTAAGAG GAGATCCATC CACTTGCAGG 000080
000081 GGCAGATCCA GTATGTGCAG ATCTCCATAG AGATAAACAT GTTCACCAAT CTCAACCTCA CCTCTTTGCT GGAGGTCATC 000160 000161 TGCCCACAGT AGGGAAAGAT GGCTGCCAAG AGCATGCAGA GCATGCAGAG GAGTGCTTTA AGAGCCCTTT AGACTGCTGA 000240 000241 GCCAGAGCAC TGTCAAGAGG GTCTATGCCA TGCAAGGCAC CAGAAACAAG GTGTCTCAGA GCCACTACCT GCTCAAGACC 000320 000321 AAGAACTTGG AGATCAAAGC ATGCTAGGGC ATGAAGGAAG TAATGGAGAT ATAGCTGCAG GAGCCAAAGG ACAAGTTGAA 000400 000401 CACCTACATC AGTAGTGTGC AGGCCATCAT CCACAAATTA GAAAATGAAT TGAAGATGGC AAAGTTAAAC ATCTGGATAC 000480 000481 CTAAATGAAT ACCAAGTCCT CCAGGTGAAG ATGGCTCTTT GTATTGAGGC TGCAGCTCAG AGGAAACCCT TCAAAGGCAA 000560 000561 GGAGACCCAG CTGAGTTTCA GCAGCATGGG AAGCACACTG CTTCCAGACC CCCTGGTCTT TGGTTTATCA CCTACTGGGG 000640 000641 TTCACATACC AACTCCTACA TGATGTCCAC CCACTCCTTC CTGTCCTACT ACAGTAGCCA TGTGCAAGAG GAGTAGATCA 000720 000721 TGGTGGAGGA ATCCATTGAG AGTGCTAAGA TTGAGGAAGG CAAAGACTAG TACCCCTCTG AAGAAAAAGC CTaggaggag 000800 000801 aaagataata aagaggagga ggaagaggtg gcagggaaga ggactaagct gctaaggaag tgtctaaaga agcaaaggat 000880 000881 aaagaagaaa taggtcaggg tgaagaagga gaggaaaagc tgaagaggag gaaaataaag ttgaaggtgc tggggaagaa 000960 000961 caagcaggta agaagaaATA TTAA |
Predicted Small Protein
| Name | NONHSAT139652_smProtein_269:346 |
| Length | 26 |
| Molecular weight | 2891.3722 |
| Aromaticity | 0.04 |
| Instability index | 75.544 |
| Isoelectric point | 9.86492919922 |
| Runs | 6 |
| Runs residual | 0.0316981132075 |
| Runs probability | 0.0338426661955 |
| Amino acid sequence | MQGTRNKVSQSHYLLKTKNLEIKAC |
| Secondary structure | LLLLLLLLLHHHHEEELLLEEEELL |
| PRMN | - |
| PiMo | - |
