Difference between revisions of "NONHSAT142439"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>GCCTCCCAAACTTGCCTTTATGTCAAGAGGTGTTGGGGACAAAGGTTCATCCAGTCATAATAAACCAAAGGCTACAGGATCTACCTCAGACCCTGGAAATAGAAACAGATCTGAATTATTTTATACCTTAAATGGGTCTTCTGTTGACTCACAACCACAATCCAAATCAAAAAATACATGGTACATTGATGAAGGTAATCAGTAATTTTAGTGTTCTTTATAATGATCCTTTCTTTCTAACTCATCAGAGAAAAATGGTTTTTTATATCAATATTTGTAGTTTTTGGAAACAGAATAAGTAGACCGCTCTTTGTAATATTGCTGAACTAAAATATTGTACACAGTTTGAACCGTACTGCTGTTAAGATTATTAAAATGTTTAAGAAATGTATTAGTAATTTGTTCTTTTCCTTTAACTGCTGATCTATTTAGGGTGGAAGATTTCTGTCTGGTTCCTTCCTGACCTCTTTAAAGCACTCCCTTTTAAAAAATTTTATCTTCCCTTGGTCCTGGGACATCATTTTCACCTAGTTTATTCTCTTCTTTG</dnaseq>| | sequence = <dnaseq>GCCTCCCAAACTTGCCTTTATGTCAAGAGGTGTTGGGGACAAAGGTTCATCCAGTCATAATAAACCAAAGGCTACAGGATCTACCTCAGACCCTGGAAATAGAAACAGATCTGAATTATTTTATACCTTAAATGGGTCTTCTGTTGACTCACAACCACAATCCAAATCAAAAAATACATGGTACATTGATGAAGGTAATCAGTAATTTTAGTGTTCTTTATAATGATCCTTTCTTTCTAACTCATCAGAGAAAAATGGTTTTTTATATCAATATTTGTAGTTTTTGGAAACAGAATAAGTAGACCGCTCTTTGTAATATTGCTGAACTAAAATATTGTACACAGTTTGAACCGTACTGCTGTTAAGATTATTAAAATGTTTAAGAAATGTATTAGTAATTTGTTCTTTTCCTTTAACTGCTGATCTATTTAGGGTGGAAGATTTCTGTCTGGTTCCTTCCTGACCTCTTTAAAGCACTCCCTTTTAAAAAATTTTATCTTCCCTTGGTCCTGGGACATCATTTTCACCTAGTTTATTCTCTTCTTTG</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG019430]][[Category:Transcripts]] |
Latest revision as of 03:05, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT142439 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
547 nt |
| Genomic location |
chr16+:50810112..50812205 |
| Exon number |
2 |
| Exons |
50810112..50810188,50811736..50812205 |
| Genome context |
|
| Sequence |
000001 GCCTCCCAAA CTTGCCTTTA TGTCAAGAGG TGTTGGGGAC AAAGGTTCAT CCAGTCATAA TAAACCAAAG GCTACAGGAT 000080
000081 CTACCTCAGA CCCTGGAAAT AGAAACAGAT CTGAATTATT TTATACCTTA AATGGGTCTT CTGTTGACTC ACAACCACAA 000160 000161 TCCAAATCAA AAAATACATG GTACATTGAT GAAGGTAATC AGTAATTTTA GTGTTCTTTA TAATGATCCT TTCTTTCTAA 000240 000241 CTCATCAGAG AAAAATGGTT TTTTATATCA ATATTTGTAG TTTTTGGAAA CAGAATAAGT AGACCGCTCT TTGTAATATT 000320 000321 GCTGAACTAA AATATTGTAC ACAGTTTGAA CCGTACTGCT GTTAAGATTA TTAAAATGTT TAAGAAATGT ATTAGTAATT 000400 000401 TGTTCTTTTC CTTTAACTGC TGATCTATTT AGGGTGGAAG ATTTCTGTCT GGTTCCTTCC TGACCTCTTT AAAGCACTCC 000480 000481 CTTTTAAAAA ATTTTATCTT CCCTTGGTCC TGGGACATCA TTTTCACCTA GTTTATTCTC TTCTTTG |
Predicted Small Protein
| Name | NONHSAT142439_smProtein_131:301 |
| Length | 57 |
| Molecular weight | 6708.8147 |
| Aromaticity | 0.142857142857 |
| Instability index | 40.91625 |
| Isoelectric point | 9.90167236328 |
| Runs | 11 |
| Runs residual | 0.0431303669009 |
| Runs probability | 0.0379711262064 |
| Amino acid sequence | MGLLLTHNHNPNQKIHGTLMKVISNFSVLYNDPFFLTHQRKMVFYINICSFWKQNK |
| Secondary structure | LLEEEELLLLLLLLLHHHHHHHHLLLEEEELLLEEEEEEEEEEEEEEELEEEEELL |
| PRMN | - |
| PiMo | - |
