Difference between revisions of "NONHSAT143632"
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==Annotated Information==
===Transcriptomic Nomeclature===
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sequence = <dnaseq>CCCAGATGTGGTTCTCAACCTTCTAGGCTAAGAAACCGATGACACCCACCTTCCAGGAATGGGACCTCCTCCTCTCAAGGACAGACTCACTTAACCACATTTGTGAAATAAAAAAGGACAGTTTACAAATGTATAGTACTGTATATATCCAATTGTCATAAATATCCCAACACAACAAGCTCTGTCACTAAAATCATAATCGAACTATAAATGTATTAATTTACAGCGAGAATAACTTTTCCAGAAACTAGATATTTCAGAGTTTCAATACTGAGCTTTGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCATATTGACTTAGAAAGCCAAGGAATAATGCAAAGGTTTTCTAGTGAGCGTTGAATCTGATCAAAGTAAAACGGATGAAACAAATGTACAATGGAAGTTCTTGCCAATGACCCCAAATC</dnaseq>| | sequence = <dnaseq>CCCAGATGTGGTTCTCAACCTTCTAGGCTAAGAAACCGATGACACCCACCTTCCAGGAATGGGACCTCCTCCTCTCAAGGACAGACTCACTTAACCACATTTGTGAAATAAAAAAGGACAGTTTACAAATGTATAGTACTGTATATATCCAATTGTCATAAATATCCCAACACAACAAGCTCTGTCACTAAAATCATAATCGAACTATAAATGTATTAATTTACAGCGAGAATAACTTTTCCAGAAACTAGATATTTCAGAGTTTCAATACTGAGCTTTGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCATATTGACTTAGAAAGCCAAGGAATAATGCAAAGGTTTTCTAGTGAGCGTTGAATCTGATCAAAGTAAAACGGATGAAACAAATGTACAATGGAAGTTCTTGCCAATGACCCCAAATC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG019953]][[Category:Transcripts]] |
Latest revision as of 03:10, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT143632 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
431 nt |
| Genomic location |
chr16-:73327765..73328195 |
| Exon number |
1 |
| Exons |
73327765..73328195 |
| Genome context |
|
| Sequence |
000001 CCCAGATGTG GTTCTCAACC TTCTAGGCTA AGAAACCGAT GACACCCACC TTCCAGGAAT GGGACCTCCT CCTCTCAAGG 000080
000081 ACAGACTCAC TTAACCACAT TTGTGAAATA AAAAAGGACA GTTTACAAAT GTATAGTACT GTATATATCC AATTGTCATA 000160 000161 AATATCCCAA CACAACAAGC TCTGTCACTA AAATCATAAT CGAACTATAA ATGTATTAAT TTACAGCGAG AATAACTTTT 000240 000241 CCAGAAACTA GATATTTCAG AGTTTCAATA CTGAGCTTTG TGGTTTTTTT TTTTTTTTTT TTTTTTTTTT GGCATATTGA 000320 000321 CTTAGAAAGC CAAGGAATAA TGCAAAGGTT TTCTAGTGAG CGTTGAATCT GATCAAAGTA AAACGGATGA AACAAATGTA 000400 000401 CAATGGAAGT TCTTGCCAAT GACCCCAAAT C |
Predicted Small Protein
| Name | NONHSAT143632_smProtein_38:160 |
| Length | 41 |
| Molecular weight | 4749.397 |
| Aromaticity | 0.1 |
| Instability index | 53.48 |
| Isoelectric point | 4.82635498047 |
| Runs | 6 |
| Runs residual | 0.0280241935484 |
| Runs probability | 0.0475622681505 |
| Amino acid sequence | MTPTFQEWDLLLSRTDSLNHICEIKKDSLQMYSTVYIQLS |
| Secondary structure | LLLLHHHHHHHHHHLLLHHHHHHHHHHHHHHHEEEEEEEL |
| PRMN | - |
| PiMo | - |
