Difference between revisions of "Lnc-CAMK2N1-2:6"

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sequence = <dnaseq>AGGCAGTCAGCGCCACAGTCCACACTCGTAACCGTTACACTCACCTGGAAATAAAAGTATTTTTGTGCGGGGACTGCAAGGACTAAGCCCGGCCGCACTCCGAGTTTCTCCTCCTCACAGACTGGATGATGAGAGGCACAGCTGAGTCCGGAGCAGACTGAGCCACCTAAGAGGGGAGGAACCGCTGCAGAGAAACCGTGTTAAGCCTTTTTGAAGTTCCAGAGGGAGAACAAGAGAGCGGAGGCTCCTGGTGGCTGGTGACAGGAGGTCTCTTCTAAGTGCCTTTCACCTAACAGCATCCTGCCCTGGAGGAGACTTCCAAGCATGATTGGAGCTCCCAATCCGATGGGGGAGACAGGACACACATACGTGTAATAAGAGTGTCCCCTGTGAGGCTGCTGCTGAGAGAAGCTCTGGGAAGTGTTCCTGAGAGTGGCTTCCCATGGAGTTTGGAGGAGGAGGAGTGGGCCAAGCAGGGAAGGACCAAGAGGTCACCTTCTCCTTTCCAGCCCCAGATGCCTTTGGCAGGAGCTGGTCCGGGCCTGGAAGGCAGTGCACGCCCACAGCGCCCTCTGCTGAACGGTATCAGAACAGCAGGCTTGGAGGGCGAAGGCAATTCCTGCAAAGGATCCCTGGTTTCCTACCCATGGGAAACCCCAGATTCTGAAGCCAGGAATGAAGGGTAGATGGAGCCTGGGTCAGCACCCGAGAGGACCCATATGTGCAACCTGGAGGATCTTGGAGCTTGGGAGTAGCGTAGGGGGTGGTTAGTTCAGTTCGGGATGGCTGAGGAAGCCGTTTTAAACAACTTTCACCGAGATCTTACTGAGGGCTCAGGAACTTGGCATGGCCACCATCCTGGGTATCCAGGGCCCCTCCTTCCCCCAGGCTAGGAGAGGAACCCCTCCCAGCAGATGCCTTCCCAGACTACCCTTGTCTCACTTATCATAGAGGACGTGTGCCGCCTTCCTTCTCCCAGGCCCTGGATCTGGGGTTGCTGGACTTGGTGCGTGGGTGGTCTGGATGCTTCTAGGATGAATTCATAATTGGGAGATTCTAGGTGATGCTCAGATGGAAATGAGGGCAACTGCTGCTTGATGGCAGAACAACAGAGCTTGGCAGAGCTAGGCTGGACTCGACTTGGCATTTTCTCTCCGTTTCAGACCAGGATACGGATTAATTGAGCCCAGCGGAGCTCAGGTTTCCCGGGGCGGGGGGCAAGCAGTGCCTTGGAGGGAGTGGGGTACTGTGGGACGGAGGACCCAGGAGACCCAGAATCCTGAACTGTCGGGCTGACTTCGTCTCCTACAGAGTTCTTTAACCCAGGAGCCCCGAGAACCTGCTTTCCTCAATGTGTTCTTCACCCGTGAGGGACTAGGACATCCTAATTGCCATCCCAGCAGGACACACACACAGACACACACACACACACACACACACACACACACACAC</dnaseq>|
 
sequence = <dnaseq>AGGCAGTCAGCGCCACAGTCCACACTCGTAACCGTTACACTCACCTGGAAATAAAAGTATTTTTGTGCGGGGACTGCAAGGACTAAGCCCGGCCGCACTCCGAGTTTCTCCTCCTCACAGACTGGATGATGAGAGGCACAGCTGAGTCCGGAGCAGACTGAGCCACCTAAGAGGGGAGGAACCGCTGCAGAGAAACCGTGTTAAGCCTTTTTGAAGTTCCAGAGGGAGAACAAGAGAGCGGAGGCTCCTGGTGGCTGGTGACAGGAGGTCTCTTCTAAGTGCCTTTCACCTAACAGCATCCTGCCCTGGAGGAGACTTCCAAGCATGATTGGAGCTCCCAATCCGATGGGGGAGACAGGACACACATACGTGTAATAAGAGTGTCCCCTGTGAGGCTGCTGCTGAGAGAAGCTCTGGGAAGTGTTCCTGAGAGTGGCTTCCCATGGAGTTTGGAGGAGGAGGAGTGGGCCAAGCAGGGAAGGACCAAGAGGTCACCTTCTCCTTTCCAGCCCCAGATGCCTTTGGCAGGAGCTGGTCCGGGCCTGGAAGGCAGTGCACGCCCACAGCGCCCTCTGCTGAACGGTATCAGAACAGCAGGCTTGGAGGGCGAAGGCAATTCCTGCAAAGGATCCCTGGTTTCCTACCCATGGGAAACCCCAGATTCTGAAGCCAGGAATGAAGGGTAGATGGAGCCTGGGTCAGCACCCGAGAGGACCCATATGTGCAACCTGGAGGATCTTGGAGCTTGGGAGTAGCGTAGGGGGTGGTTAGTTCAGTTCGGGATGGCTGAGGAAGCCGTTTTAAACAACTTTCACCGAGATCTTACTGAGGGCTCAGGAACTTGGCATGGCCACCATCCTGGGTATCCAGGGCCCCTCCTTCCCCCAGGCTAGGAGAGGAACCCCTCCCAGCAGATGCCTTCCCAGACTACCCTTGTCTCACTTATCATAGAGGACGTGTGCCGCCTTCCTTCTCCCAGGCCCTGGATCTGGGGTTGCTGGACTTGGTGCGTGGGTGGTCTGGATGCTTCTAGGATGAATTCATAATTGGGAGATTCTAGGTGATGCTCAGATGGAAATGAGGGCAACTGCTGCTTGATGGCAGAACAACAGAGCTTGGCAGAGCTAGGCTGGACTCGACTTGGCATTTTCTCTCCGTTTCAGACCAGGATACGGATTAATTGAGCCCAGCGGAGCTCAGGTTTCCCGGGGCGGGGGGCAAGCAGTGCCTTGGAGGGAGTGGGGTACTGTGGGACGGAGGACCCAGGAGACCCAGAATCCTGAACTGTCGGGCTGACTTCGTCTCCTACAGAGTTCTTTAACCCAGGAGCCCCGAGAACCTGCTTTCCTCAATGTGTTCTTCACCCGTGAGGGACTAGGACATCCTAATTGCCATCCCAGCAGGACACACACACAGACACACACACACACACACACACACACACACACACAC</dnaseq>|
 
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[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:lnc-CAMK2N1-2]][[Category:NONHSAG000572]][[Category:Transcripts]]

Latest revision as of 03:51, 17 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-CAMK2N1-2:6

Source

LNCipedia2.1

Same with

NONHSAT001362

Classification

intergenic

Length

1452 nt

Genomic location

chr1-:20687598..20732187

Exon number

4

Exons

20687598..20688534,20688637..20688887,20700088..20700231,20732068..20732187

Genome context

Sequence
000001 AGGCAGTCAG CGCCACAGTC CACACTCGTA ACCGTTACAC TCACCTGGAA ATAAAAGTAT TTTTGTGCGG GGACTGCAAG 000080
000081 GACTAAGCCC GGCCGCACTC CGAGTTTCTC CTCCTCACAG ACTGGATGAT GAGAGGCACA GCTGAGTCCG GAGCAGACTG 000160
000161 AGCCACCTAA GAGGGGAGGA ACCGCTGCAG AGAAACCGTG TTAAGCCTTT TTGAAGTTCC AGAGGGAGAA CAAGAGAGCG 000240
000241 GAGGCTCCTG GTGGCTGGTG ACAGGAGGTC TCTTCTAAGT GCCTTTCACC TAACAGCATC CTGCCCTGGA GGAGACTTCC 000320
000321 AAGCATGATT GGAGCTCCCA ATCCGATGGG GGAGACAGGA CACACATACG TGTAATAAGA GTGTCCCCTG TGAGGCTGCT 000400
000401 GCTGAGAGAA GCTCTGGGAA GTGTTCCTGA GAGTGGCTTC CCATGGAGTT TGGAGGAGGA GGAGTGGGCC AAGCAGGGAA 000480
000481 GGACCAAGAG GTCACCTTCT CCTTTCCAGC CCCAGATGCC TTTGGCAGGA GCTGGTCCGG GCCTGGAAGG CAGTGCACGC 000560
000561 CCACAGCGCC CTCTGCTGAA CGGTATCAGA ACAGCAGGCT TGGAGGGCGA AGGCAATTCC TGCAAAGGAT CCCTGGTTTC 000640
000641 CTACCCATGG GAAACCCCAG ATTCTGAAGC CAGGAATGAA GGGTAGATGG AGCCTGGGTC AGCACCCGAG AGGACCCATA 000720
000721 TGTGCAACCT GGAGGATCTT GGAGCTTGGG AGTAGCGTAG GGGGTGGTTA GTTCAGTTCG GGATGGCTGA GGAAGCCGTT 000800
000801 TTAAACAACT TTCACCGAGA TCTTACTGAG GGCTCAGGAA CTTGGCATGG CCACCATCCT GGGTATCCAG GGCCCCTCCT 000880
000881 TCCCCCAGGC TAGGAGAGGA ACCCCTCCCA GCAGATGCCT TCCCAGACTA CCCTTGTCTC ACTTATCATA GAGGACGTGT 000960
000961 GCCGCCTTCC TTCTCCCAGG CCCTGGATCT GGGGTTGCTG GACTTGGTGC GTGGGTGGTC TGGATGCTTC TAGGATGAAT 001040
001041 TCATAATTGG GAGATTCTAG GTGATGCTCA GATGGAAATG AGGGCAACTG CTGCTTGATG GCAGAACAAC AGAGCTTGGC 001120
001121 AGAGCTAGGC TGGACTCGAC TTGGCATTTT CTCTCCGTTT CAGACCAGGA TACGGATTAA TTGAGCCCAG CGGAGCTCAG 001200
001201 GTTTCCCGGG GCGGGGGGCA AGCAGTGCCT TGGAGGGAGT GGGGTACTGT GGGACGGAGG ACCCAGGAGA CCCAGAATCC 001280
001281 TGAACTGTCG GGCTGACTTC GTCTCCTACA GAGTTCTTTA ACCCAGGAGC CCCGAGAACC TGCTTTCCTC AATGTGTTCT 001360
001361 TCACCCGTGA GGGACTAGGA CATCCTAATT GCCATCCCAG CAGGACACAC ACACAGACAC ACACACACAC ACACACACAC 001440
001441 ACACACACAC AC
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