Difference between revisions of "Lnc-CD47-2:4"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>CCAAACTTGGTGGTGTAAAATACCACCAATCATTTTATTATTAACTCCCACAAGTTTGGGAAGTTGCCTGAGCTCACTTAGGCGGTATTCACTCAGAGTGTCTCACACACTTGCTGTCAGACAATGGTTGACACTCAAATATTCTGAATGCTTGATGCTCACGTGGCTGGCATGTGGGCTGGGACCACTCAAACAGCTGGAATTTGGAACTTCTAGGGACCCTAGGAATGCTTCTTTGTCTCTGTGTGGTCTCTTCAGCATAGCAACAGCAGCGTAGCTGAACATCTTACGGATGGCCCAGGGCTCCAAAGGCTCGTTTCCTAAGTGAGAGAGAGCCTGGCTGAAGCTGTATTACCATTCATTCTCCAGCCTCCGAAGTCTCAAAGCATCACTTCCACCATACTCTAACTGTCAAGACAAACACAAAGGCCCAGAAACTGCCAGACTGTCTTCTGAAGTGGCTATAATATTTACACTCCCATCAGCAGTGTAGAAGGGGTCTCACTATGTTGTCTGGAGTGCTGTGGTGGAGTGGAGTGGCTATTCACAGCTGAGTTTGCAGAGTAAACCACTACCCTGAAATCTGGAAAGGCAGGTGCACCCACAGATCCTCAGCTGAGATCCAATTACCTGAAATAGAAGCTGCCATTAGGAACACTTAAAAGAGCCTGTTCTGCTGGGACACAGAATCACTTGCTCCATCTCATACATTGATGATGATTAATTTGTATGTGTACCTTCCAAAAAAGATGGTTGTGTTTGAATGGAGGCCTTCTGGACAGGAAAATTGCAAAGTACAATTAACATTTGAGTCTGTCTGAGTCATGAAGAAATGGAGATTACTGAAAATAATTCATTTTGGTATCTTCTTACATCCTGAGAGACTAATCTTTCCAAGTTCATCTGAGGCTCCTCTTCTCCATGACAACCTCATCCAGGGATTTCTTCCTGTCCTGGTGTTTTATGACATCATCCTCATCTCGCTTGTAAGGATAATAGCCTTCCTCCAAACCTCACACACTTTTGGAGGAGATCACTTTTTTTAAAGTGCATGGAAATGTTTTGAAACAGTGAAATCTATAATGATAGGTTTCATAATTCTAACATCCACACCATATGAATCACATCCTTCCTGAGATAATGAGCACACAATTGCCTGGATACCTGAAGGAATGGAGACAGCGGCAGAAAACACTGCAGAGAGGTGGAAACATCCGTTAATATTTTAAAATCCCATTACTGCTACCAACAATAATAATGGATGCATAGAAATAGATCTGGATTAGCTGAGCTTGAAACAGTCCATCTCACACACACACAAAAGAATTTCAGATACAGTGAACCCACATGTTGAAGCTTTCTAGTATAATAAAAATTTCAACTGTTCTGTTGAATCATCTGCCTGATTGGAGGCTACAGAAAAGATGTCATCTTAGGAGTGCTTGCTCTGAGTGAGGCTCATCTTCAAATCTGAATGACCACAAGGAGATTTGATTATACATGTGAACACCTCAGAAGGCACAGCCCACCCAGAAGGCAGACAGGTCAGGCTGCTTTTTCTTCATTGCTTGGATTCAATCCTCCGGGCGGCTCAGGCTCAAACATAACTTAAGCATGATTAAACTTTAGAAGAAGCTGCCAGGAAGACTGTGAAATCTTCATGCCCAAGGATCCCTAAAATTAGGAGCAACAACCACTTGGCTCAG</dnaseq>| | sequence = <dnaseq>CCAAACTTGGTGGTGTAAAATACCACCAATCATTTTATTATTAACTCCCACAAGTTTGGGAAGTTGCCTGAGCTCACTTAGGCGGTATTCACTCAGAGTGTCTCACACACTTGCTGTCAGACAATGGTTGACACTCAAATATTCTGAATGCTTGATGCTCACGTGGCTGGCATGTGGGCTGGGACCACTCAAACAGCTGGAATTTGGAACTTCTAGGGACCCTAGGAATGCTTCTTTGTCTCTGTGTGGTCTCTTCAGCATAGCAACAGCAGCGTAGCTGAACATCTTACGGATGGCCCAGGGCTCCAAAGGCTCGTTTCCTAAGTGAGAGAGAGCCTGGCTGAAGCTGTATTACCATTCATTCTCCAGCCTCCGAAGTCTCAAAGCATCACTTCCACCATACTCTAACTGTCAAGACAAACACAAAGGCCCAGAAACTGCCAGACTGTCTTCTGAAGTGGCTATAATATTTACACTCCCATCAGCAGTGTAGAAGGGGTCTCACTATGTTGTCTGGAGTGCTGTGGTGGAGTGGAGTGGCTATTCACAGCTGAGTTTGCAGAGTAAACCACTACCCTGAAATCTGGAAAGGCAGGTGCACCCACAGATCCTCAGCTGAGATCCAATTACCTGAAATAGAAGCTGCCATTAGGAACACTTAAAAGAGCCTGTTCTGCTGGGACACAGAATCACTTGCTCCATCTCATACATTGATGATGATTAATTTGTATGTGTACCTTCCAAAAAAGATGGTTGTGTTTGAATGGAGGCCTTCTGGACAGGAAAATTGCAAAGTACAATTAACATTTGAGTCTGTCTGAGTCATGAAGAAATGGAGATTACTGAAAATAATTCATTTTGGTATCTTCTTACATCCTGAGAGACTAATCTTTCCAAGTTCATCTGAGGCTCCTCTTCTCCATGACAACCTCATCCAGGGATTTCTTCCTGTCCTGGTGTTTTATGACATCATCCTCATCTCGCTTGTAAGGATAATAGCCTTCCTCCAAACCTCACACACTTTTGGAGGAGATCACTTTTTTTAAAGTGCATGGAAATGTTTTGAAACAGTGAAATCTATAATGATAGGTTTCATAATTCTAACATCCACACCATATGAATCACATCCTTCCTGAGATAATGAGCACACAATTGCCTGGATACCTGAAGGAATGGAGACAGCGGCAGAAAACACTGCAGAGAGGTGGAAACATCCGTTAATATTTTAAAATCCCATTACTGCTACCAACAATAATAATGGATGCATAGAAATAGATCTGGATTAGCTGAGCTTGAAACAGTCCATCTCACACACACACAAAAGAATTTCAGATACAGTGAACCCACATGTTGAAGCTTTCTAGTATAATAAAAATTTCAACTGTTCTGTTGAATCATCTGCCTGATTGGAGGCTACAGAAAAGATGTCATCTTAGGAGTGCTTGCTCTGAGTGAGGCTCATCTTCAAATCTGAATGACCACAAGGAGATTTGATTATACATGTGAACACCTCAGAAGGCACAGCCCACCCAGAAGGCAGACAGGTCAGGCTGCTTTTTCTTCATTGCTTGGATTCAATCCTCCGGGCGGCTCAGGCTCAAACATAACTTAAGCATGATTAAACTTTAGAAGAAGCTGCCAGGAAGACTGTGAAATCTTCATGCCCAAGGATCCCTAAAATTAGGAGCAACAACCACTTGGCTCAG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:lnc-CD47-2]][[Category:NONHSAG035681]][[Category:Transcripts]] |
Latest revision as of 03:54, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
lnc-CD47-2:4 |
| Source |
LNCipedia2.1 |
| Same with |
NONHSAT091061 |
| Classification |
intergenic |
| Length |
1706 nt |
| Genomic location |
chr3-:107560790..107597182 |
| Exon number |
10 |
| Exons |
107560790..107561059,107562523..107562626,107567753..107567965,107568670..107568818,107572720..107572901,107575927..107576049,107586158..107586272,107591815..107591873,107594977..107595033,107596749..107597182 |
| Genome context |
|
| Sequence |
000001 CCAAACTTGG TGGTGTAAAA TACCACCAAT CATTTTATTA TTAACTCCCA CAAGTTTGGG AAGTTGCCTG AGCTCACTTA 000080
000081 GGCGGTATTC ACTCAGAGTG TCTCACACAC TTGCTGTCAG ACAATGGTTG ACACTCAAAT ATTCTGAATG CTTGATGCTC 000160 000161 ACGTGGCTGG CATGTGGGCT GGGACCACTC AAACAGCTGG AATTTGGAAC TTCTAGGGAC CCTAGGAATG CTTCTTTGTC 000240 000241 TCTGTGTGGT CTCTTCAGCA TAGCAACAGC AGCGTAGCTG AACATCTTAC GGATGGCCCA GGGCTCCAAA GGCTCGTTTC 000320 000321 CTAAGTGAGA GAGAGCCTGG CTGAAGCTGT ATTACCATTC ATTCTCCAGC CTCCGAAGTC TCAAAGCATC ACTTCCACCA 000400 000401 TACTCTAACT GTCAAGACAA ACACAAAGGC CCAGAAACTG CCAGACTGTC TTCTGAAGTG GCTATAATAT TTACACTCCC 000480 000481 ATCAGCAGTG TAGAAGGGGT CTCACTATGT TGTCTGGAGT GCTGTGGTGG AGTGGAGTGG CTATTCACAG CTGAGTTTGC 000560 000561 AGAGTAAACC ACTACCCTGA AATCTGGAAA GGCAGGTGCA CCCACAGATC CTCAGCTGAG ATCCAATTAC CTGAAATAGA 000640 000641 AGCTGCCATT AGGAACACTT AAAAGAGCCT GTTCTGCTGG GACACAGAAT CACTTGCTCC ATCTCATACA TTGATGATGA 000720 000721 TTAATTTGTA TGTGTACCTT CCAAAAAAGA TGGTTGTGTT TGAATGGAGG CCTTCTGGAC AGGAAAATTG CAAAGTACAA 000800 000801 TTAACATTTG AGTCTGTCTG AGTCATGAAG AAATGGAGAT TACTGAAAAT AATTCATTTT GGTATCTTCT TACATCCTGA 000880 000881 GAGACTAATC TTTCCAAGTT CATCTGAGGC TCCTCTTCTC CATGACAACC TCATCCAGGG ATTTCTTCCT GTCCTGGTGT 000960 000961 TTTATGACAT CATCCTCATC TCGCTTGTAA GGATAATAGC CTTCCTCCAA ACCTCACACA CTTTTGGAGG AGATCACTTT 001040 001041 TTTTAAAGTG CATGGAAATG TTTTGAAACA GTGAAATCTA TAATGATAGG TTTCATAATT CTAACATCCA CACCATATGA 001120 001121 ATCACATCCT TCCTGAGATA ATGAGCACAC AATTGCCTGG ATACCTGAAG GAATGGAGAC AGCGGCAGAA AACACTGCAG 001200 001201 AGAGGTGGAA ACATCCGTTA ATATTTTAAA ATCCCATTAC TGCTACCAAC AATAATAATG GATGCATAGA AATAGATCTG 001280 001281 GATTAGCTGA GCTTGAAACA GTCCATCTCA CACACACACA AAAGAATTTC AGATACAGTG AACCCACATG TTGAAGCTTT 001360 001361 CTAGTATAAT AAAAATTTCA ACTGTTCTGT TGAATCATCT GCCTGATTGG AGGCTACAGA AAAGATGTCA TCTTAGGAGT 001440 001441 GCTTGCTCTG AGTGAGGCTC ATCTTCAAAT CTGAATGACC ACAAGGAGAT TTGATTATAC ATGTGAACAC CTCAGAAGGC 001520 001521 ACAGCCCACC CAGAAGGCAG ACAGGTCAGG CTGCTTTTTC TTCATTGCTT GGATTCAATC CTCCGGGCGG CTCAGGCTCA 001600 001601 AACATAACTT AAGCATGATT AAACTTTAGA AGAAGCTGCC AGGAAGACTG TGAAATCTTC ATGCCCAAGG ATCCCTAAAA 001680 001681 TTAGGAGCAA CAACCACTTG GCTCAG |