Difference between revisions of "Lnc-DEC1-1:1"
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sequence = <dnaseq>ACTGACTCTCATTTCGGACTCATCCCACCTGCACCCTGGTGAAATAAACAGCTTCATTGCTCACACAAAGCCTGTTTGGTGGTCTCTTCACACGGACGTGCATGAAATTTGGTGCCGTGACTCGGATCGGGGGACCTCCCTTAGGAGATCAATCCCCCGTCCTCCTGCTCTTTGCTCCGTGAGAAAGATCCACCTACGACCTCAGGTCCTCAGACCGACCAGCCCAAGAAACATGTCACCAATTTCAAATCCGACGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGTAATGGCGCATCTCGGCTCACCGCAACCTCCTCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGTGCCACCATGCCCAGCTGAATGAAATGAATATAGAGGAGAACTGAAAGGCCATGGAGGATCTGAGCCACTACATGGAAAGAGCAAGGGTCCATGAATGACAGCTTGAAACAGGGTCCCTCTCTGCTGCCAACCTGCATGGATGGAGACATGAATAAGAAATAAGCACTACTGAGTCAAGACAGAGAGATCTGAAGGTTGATTGTTATAGCAGTTGGACTTCCCTATTATCTAATATACTGTGCTATCTTCCAATGCTTAGCTAGTAAGGGGGGCTCTAGGGATACCAGTTAAAGAACTCTGGAATGCATCCCTTGCAAGTCTGAGATATGAAAGGCCACAATTAGGTCATGTTAAGAAATCTAAAGCTGACTGTAGACTGAAGTCTGGCTTCAGTAAATATGAAAGAGAAAAGAAGAGCTGACTAACTGCTTTGAATTAGAGCCAGGAGAGACTGTTGCATTGCTACTGACCTGCAGTTAGAAAGTTCATCAGGGCAAGGAGCCAGTGATTGTTTCCCAGGGAACATGTGTGGGCCAATGATACAGAGCTCACTGGAGTCTTGGTTGGTTTTGTCCAGTAGGTCTGCCTGGAGGGAGAAGGAAAACTTACAAAAGGAGACTGGGGGTATACTTGTGTGTGAAGGCCCAGATAATGAGGACAGATCCCCAGAGACCTCCTAGAATAGCTAGAAAAGCCTGGGGTCAAAGAAGCTGCAGGGGAGGAGTGTCCAACATGAAACCTCTGAGGAGTTCAGGGAAACACCCCAAGAGAAAGGAAGTCAGCTTTAATCTTCGGCAGGGCCTAGAGAGTGAGAAGTCAATCAGGAATAATAAATGACCCATCTCCTTGTCCCCTGTACCCTTTGAACCAGAGGGGAGCAAAACAGAAGCTAGCTAATGAAAGATGTGTTATAGAATTCAGGGTAACTGAGGTTATGCTGCAGAAGCAAATAACAAAAAGATCTCGAGGACTTCTTGTTTAAGTTCTTTTTTTCTTCACATACATTTATTTTCTGTTCACACTACAGTATGTTATCAGTTAGCATGGGTCTCTGTTCAGCATAGTTCAGGCAGGCACACAGGCCAATAGAGGTTCTGTCTTGATACATATTTCCAAAAGACATTGTCATTGCATAAGCACAGCATTGGAACACTGTGTGACTGTCCTATGGACCTCAACTGTCCCATTTTTAACCACTGTGTGACTGTCCTGTGGACCTCAACTGTCCCATTTTTAAAATGGGAATTCATGAAATGAGGCAGAAAAAAGGAACAACACATATCGACATTTCTCA</dnaseq>| | sequence = <dnaseq>ACTGACTCTCATTTCGGACTCATCCCACCTGCACCCTGGTGAAATAAACAGCTTCATTGCTCACACAAAGCCTGTTTGGTGGTCTCTTCACACGGACGTGCATGAAATTTGGTGCCGTGACTCGGATCGGGGGACCTCCCTTAGGAGATCAATCCCCCGTCCTCCTGCTCTTTGCTCCGTGAGAAAGATCCACCTACGACCTCAGGTCCTCAGACCGACCAGCCCAAGAAACATGTCACCAATTTCAAATCCGACGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGTAATGGCGCATCTCGGCTCACCGCAACCTCCTCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGTGCCACCATGCCCAGCTGAATGAAATGAATATAGAGGAGAACTGAAAGGCCATGGAGGATCTGAGCCACTACATGGAAAGAGCAAGGGTCCATGAATGACAGCTTGAAACAGGGTCCCTCTCTGCTGCCAACCTGCATGGATGGAGACATGAATAAGAAATAAGCACTACTGAGTCAAGACAGAGAGATCTGAAGGTTGATTGTTATAGCAGTTGGACTTCCCTATTATCTAATATACTGTGCTATCTTCCAATGCTTAGCTAGTAAGGGGGGCTCTAGGGATACCAGTTAAAGAACTCTGGAATGCATCCCTTGCAAGTCTGAGATATGAAAGGCCACAATTAGGTCATGTTAAGAAATCTAAAGCTGACTGTAGACTGAAGTCTGGCTTCAGTAAATATGAAAGAGAAAAGAAGAGCTGACTAACTGCTTTGAATTAGAGCCAGGAGAGACTGTTGCATTGCTACTGACCTGCAGTTAGAAAGTTCATCAGGGCAAGGAGCCAGTGATTGTTTCCCAGGGAACATGTGTGGGCCAATGATACAGAGCTCACTGGAGTCTTGGTTGGTTTTGTCCAGTAGGTCTGCCTGGAGGGAGAAGGAAAACTTACAAAAGGAGACTGGGGGTATACTTGTGTGTGAAGGCCCAGATAATGAGGACAGATCCCCAGAGACCTCCTAGAATAGCTAGAAAAGCCTGGGGTCAAAGAAGCTGCAGGGGAGGAGTGTCCAACATGAAACCTCTGAGGAGTTCAGGGAAACACCCCAAGAGAAAGGAAGTCAGCTTTAATCTTCGGCAGGGCCTAGAGAGTGAGAAGTCAATCAGGAATAATAAATGACCCATCTCCTTGTCCCCTGTACCCTTTGAACCAGAGGGGAGCAAAACAGAAGCTAGCTAATGAAAGATGTGTTATAGAATTCAGGGTAACTGAGGTTATGCTGCAGAAGCAAATAACAAAAAGATCTCGAGGACTTCTTGTTTAAGTTCTTTTTTTCTTCACATACATTTATTTTCTGTTCACACTACAGTATGTTATCAGTTAGCATGGGTCTCTGTTCAGCATAGTTCAGGCAGGCACACAGGCCAATAGAGGTTCTGTCTTGATACATATTTCCAAAAGACATTGTCATTGCATAAGCACAGCATTGGAACACTGTGTGACTGTCCTATGGACCTCAACTGTCCCATTTTTAACCACTGTGTGACTGTCCTGTGGACCTCAACTGTCCCATTTTTAAAATGGGAATTCATGAAATGAGGCAGAAAAAAGGAACAACACATATCGACATTTCTCA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-DEC1-1]][[Category:NONHSAG053284]] | + | [[Category:Intergenic]][[Category:lnc-DEC1-1]][[Category:NONHSAG053284]][[Category:Transcripts]] |
Latest revision as of 04:04, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
lnc-DEC1-1:1 |
Source |
LNCipedia2.1 |
Same with |
NONHSAT134412 |
Classification |
intergenic |
Length |
1675 nt |
Genomic location |
chr9+:118235807..118353358 |
Exon number |
3 |
Exons |
118235807..118236059,118279334..118279475,118352079..118353358 |
Genome context |
|
Sequence |
000001 ACTGACTCTC ATTTCGGACT CATCCCACCT GCACCCTGGT GAAATAAACA GCTTCATTGC TCACACAAAG CCTGTTTGGT 000080
000081 GGTCTCTTCA CACGGACGTG CATGAAATTT GGTGCCGTGA CTCGGATCGG GGGACCTCCC TTAGGAGATC AATCCCCCGT 000160 000161 CCTCCTGCTC TTTGCTCCGT GAGAAAGATC CACCTACGAC CTCAGGTCCT CAGACCGACC AGCCCAAGAA ACATGTCACC 000240 000241 AATTTCAAAT CCGACGGAGT TTCGCTCTTG TTGCCCAGGC TGGAGTGTAA TGGCGCATCT CGGCTCACCG CAACCTCCTC 000320 000321 CTCCCGGGTT CAAGTGATTC TCCTGCCTCA GCCTCCCAAG TAGCTGGGAT TACAGGCATG TGCCACCATG CCCAGCTGAA 000400 000401 TGAAATGAAT ATAGAGGAGA ACTGAAAGGC CATGGAGGAT CTGAGCCACT ACATGGAAAG AGCAAGGGTC CATGAATGAC 000480 000481 AGCTTGAAAC AGGGTCCCTC TCTGCTGCCA ACCTGCATGG ATGGAGACAT GAATAAGAAA TAAGCACTAC TGAGTCAAGA 000560 000561 CAGAGAGATC TGAAGGTTGA TTGTTATAGC AGTTGGACTT CCCTATTATC TAATATACTG TGCTATCTTC CAATGCTTAG 000640 000641 CTAGTAAGGG GGGCTCTAGG GATACCAGTT AAAGAACTCT GGAATGCATC CCTTGCAAGT CTGAGATATG AAAGGCCACA 000720 000721 ATTAGGTCAT GTTAAGAAAT CTAAAGCTGA CTGTAGACTG AAGTCTGGCT TCAGTAAATA TGAAAGAGAA AAGAAGAGCT 000800 000801 GACTAACTGC TTTGAATTAG AGCCAGGAGA GACTGTTGCA TTGCTACTGA CCTGCAGTTA GAAAGTTCAT CAGGGCAAGG 000880 000881 AGCCAGTGAT TGTTTCCCAG GGAACATGTG TGGGCCAATG ATACAGAGCT CACTGGAGTC TTGGTTGGTT TTGTCCAGTA 000960 000961 GGTCTGCCTG GAGGGAGAAG GAAAACTTAC AAAAGGAGAC TGGGGGTATA CTTGTGTGTG AAGGCCCAGA TAATGAGGAC 001040 001041 AGATCCCCAG AGACCTCCTA GAATAGCTAG AAAAGCCTGG GGTCAAAGAA GCTGCAGGGG AGGAGTGTCC AACATGAAAC 001120 001121 CTCTGAGGAG TTCAGGGAAA CACCCCAAGA GAAAGGAAGT CAGCTTTAAT CTTCGGCAGG GCCTAGAGAG TGAGAAGTCA 001200 001201 ATCAGGAATA ATAAATGACC CATCTCCTTG TCCCCTGTAC CCTTTGAACC AGAGGGGAGC AAAACAGAAG CTAGCTAATG 001280 001281 AAAGATGTGT TATAGAATTC AGGGTAACTG AGGTTATGCT GCAGAAGCAA ATAACAAAAA GATCTCGAGG ACTTCTTGTT 001360 001361 TAAGTTCTTT TTTTCTTCAC ATACATTTAT TTTCTGTTCA CACTACAGTA TGTTATCAGT TAGCATGGGT CTCTGTTCAG 001440 001441 CATAGTTCAG GCAGGCACAC AGGCCAATAG AGGTTCTGTC TTGATACATA TTTCCAAAAG ACATTGTCAT TGCATAAGCA 001520 001521 CAGCATTGGA ACACTGTGTG ACTGTCCTAT GGACCTCAAC TGTCCCATTT TTAACCACTG TGTGACTGTC CTGTGGACCT 001600 001601 CAACTGTCCC ATTTTTAAAA TGGGAATTCA TGAAATGAGG CAGAAAAAAG GAACAACACA TATCGACATT TCTCA |