Difference between revisions of "Lnc-DHX38-3:1"

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sequence = <dnaseq>GGACGCAAAGCATCAACGAAATATTATGGATGTCTTCAAGAAAGGGGGAGAGAAAATCCTGACTGAAGGAATGTCCACATAAATTATTTTTATTTAAATGAATTCAAAGGATGGGATGAGGGCAAGTCAGACGGAGTCGCGTGGAAAACATGAATAATATTAATATGCATAAAGAATTCTCACCAACGAGGAGAAGCTCCTCACTACAGCTCTTGGGACAAACAGGTTCATTAGGAAACAGCTCAGAGCGACTACAGCATTTTGCTATTTCAATTTTTTCCCTTATTTTAAATGAAGAGTCAGACAGATGTGTTTTCTTTGCATGGCAGCATTGAGATGGATCCAATCTGCGAAATTTGCTGCCCAAATAGCATTTCTAATGGAAACTGGAACTAAACAAGGGCACGGATATGGGAGGGAGGGGAGAAGAGAGAATACACGAAGAAGAGTATATTCAGAGCCACTGCATGGCATTTTGAGTACAGGAGGTTTTCAGGAACGATCTTTGCTTCATTAGTCTCCCCTGTGGGCTCCTGATGTAGGGAGCTATCAGGGTATACCAAGATGAGCACTGAGACAGGCCTTTCTAGGTCTGAGGCTGAGGAAAGCAGCGGCAACTTGGTGCCTGTCCCCCAGAGCTGTCTACAGTTCAGAAGCCAAAAGCACAGCTACTTCTAATTTGGGGATGCAGTAGAGTGCCTACTGATCCAGGTGGACAAAACAAATCTTTTTTGGAAACCAACGAAACAAAAATAATCTGGAGCTGTCTTGGTTGAAGCAGCGTGCGGGATTCAGACACCTCCCACTCAGACCCCTGCCCTTCCTTCAACATTGGCATCTAAAGAATCTCTCCAGCGTTTGGAGGAAATCAAGTTGGAAGTTAAGCAAGAAGCAACACAAAAAACTGAGTAACTACAAAGAAGTAAAAAGTAAAAACTCTGCAAGTTGAATTGTTAGCTGGCAGGCTACCATGTGATATTGGCTCAGAATTGTCTTGTGTTAGTAAAGATACAAACATTTGAATTCTATTTATGAACTTTGAATTCTGCTTCTGTAATTAGACTTTTTTTTTTTTTTTTGGACAGAGTCTCACTCTGTCGCTTAGGCTGGACTGCAGCGGAATGATCTCAGCTCACTGCAAACTCCGTCTCCCGGGTTCAAATGATTCTCCTGCCTCAGCCTCCCCAGTAGCTGTAGCTGGGATTACAGGTGTGGATCACCACGCGCAGCTGAATTTTTTTTTGTATTTTCAGTACAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTTCTGACCTCAAATCATCCACTTGCCTTCGCTTCCCAATGTGCTGGGATTACAGGCATGAGCCAGTGTGCCCAGCCTGCATGTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTGAGATGGAGTATTGCTCTGTTGCTCAGGCTGGAGCGCGCGATCTCAGCTCACCGCAACCTCCGCCTTCCAGATTCAAGCAATTCTCCTGCCTCAGCTTCCCAAGTAGCTGGGACTGTTACAGGTGCATGCTGCCACGCCCAGCTAATTTTTTTGTATTTTAGTAGAGAAGGGGTTTCACCATGTTGCCCAGGCTGGTCGGGAACTCCTGAGCTCAGGCAATCCGCCTGCCTC</dnaseq>|
 
sequence = <dnaseq>GGACGCAAAGCATCAACGAAATATTATGGATGTCTTCAAGAAAGGGGGAGAGAAAATCCTGACTGAAGGAATGTCCACATAAATTATTTTTATTTAAATGAATTCAAAGGATGGGATGAGGGCAAGTCAGACGGAGTCGCGTGGAAAACATGAATAATATTAATATGCATAAAGAATTCTCACCAACGAGGAGAAGCTCCTCACTACAGCTCTTGGGACAAACAGGTTCATTAGGAAACAGCTCAGAGCGACTACAGCATTTTGCTATTTCAATTTTTTCCCTTATTTTAAATGAAGAGTCAGACAGATGTGTTTTCTTTGCATGGCAGCATTGAGATGGATCCAATCTGCGAAATTTGCTGCCCAAATAGCATTTCTAATGGAAACTGGAACTAAACAAGGGCACGGATATGGGAGGGAGGGGAGAAGAGAGAATACACGAAGAAGAGTATATTCAGAGCCACTGCATGGCATTTTGAGTACAGGAGGTTTTCAGGAACGATCTTTGCTTCATTAGTCTCCCCTGTGGGCTCCTGATGTAGGGAGCTATCAGGGTATACCAAGATGAGCACTGAGACAGGCCTTTCTAGGTCTGAGGCTGAGGAAAGCAGCGGCAACTTGGTGCCTGTCCCCCAGAGCTGTCTACAGTTCAGAAGCCAAAAGCACAGCTACTTCTAATTTGGGGATGCAGTAGAGTGCCTACTGATCCAGGTGGACAAAACAAATCTTTTTTGGAAACCAACGAAACAAAAATAATCTGGAGCTGTCTTGGTTGAAGCAGCGTGCGGGATTCAGACACCTCCCACTCAGACCCCTGCCCTTCCTTCAACATTGGCATCTAAAGAATCTCTCCAGCGTTTGGAGGAAATCAAGTTGGAAGTTAAGCAAGAAGCAACACAAAAAACTGAGTAACTACAAAGAAGTAAAAAGTAAAAACTCTGCAAGTTGAATTGTTAGCTGGCAGGCTACCATGTGATATTGGCTCAGAATTGTCTTGTGTTAGTAAAGATACAAACATTTGAATTCTATTTATGAACTTTGAATTCTGCTTCTGTAATTAGACTTTTTTTTTTTTTTTTGGACAGAGTCTCACTCTGTCGCTTAGGCTGGACTGCAGCGGAATGATCTCAGCTCACTGCAAACTCCGTCTCCCGGGTTCAAATGATTCTCCTGCCTCAGCCTCCCCAGTAGCTGTAGCTGGGATTACAGGTGTGGATCACCACGCGCAGCTGAATTTTTTTTTGTATTTTCAGTACAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTTCTGACCTCAAATCATCCACTTGCCTTCGCTTCCCAATGTGCTGGGATTACAGGCATGAGCCAGTGTGCCCAGCCTGCATGTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTGAGATGGAGTATTGCTCTGTTGCTCAGGCTGGAGCGCGCGATCTCAGCTCACCGCAACCTCCGCCTTCCAGATTCAAGCAATTCTCCTGCCTCAGCTTCCCAAGTAGCTGGGACTGTTACAGGTGCATGCTGCCACGCCCAGCTAATTTTTTTGTATTTTAGTAGAGAAGGGGTTTCACCATGTTGCCCAGGCTGGTCGGGAACTCCTGAGCTCAGGCAATCCGCCTGCCTC</dnaseq>|
 
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[[Category:Intergenic]][[Category:lnc-DHX38-3]][[Category:NONHSAG019924]]
+
[[Category:Intergenic]][[Category:lnc-DHX38-3]][[Category:NONHSAG019924]][[Category:Transcripts]]

Latest revision as of 04:05, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-DHX38-3:1

Source

LNCipedia2.1

Same with

NONHSAT143570

Classification

intergenic

Length

1642 nt

Genomic location

chr16+:72463252..72567788

Exon number

2

Exons

72463252..72463962,72566858..72567788

Genome context

Sequence
000001 GGACGCAAAG CATCAACGAA ATATTATGGA TGTCTTCAAG AAAGGGGGAG AGAAAATCCT GACTGAAGGA ATGTCCACAT 000080
000081 AAATTATTTT TATTTAAATG AATTCAAAGG ATGGGATGAG GGCAAGTCAG ACGGAGTCGC GTGGAAAACA TGAATAATAT 000160
000161 TAATATGCAT AAAGAATTCT CACCAACGAG GAGAAGCTCC TCACTACAGC TCTTGGGACA AACAGGTTCA TTAGGAAACA 000240
000241 GCTCAGAGCG ACTACAGCAT TTTGCTATTT CAATTTTTTC CCTTATTTTA AATGAAGAGT CAGACAGATG TGTTTTCTTT 000320
000321 GCATGGCAGC ATTGAGATGG ATCCAATCTG CGAAATTTGC TGCCCAAATA GCATTTCTAA TGGAAACTGG AACTAAACAA 000400
000401 GGGCACGGAT ATGGGAGGGA GGGGAGAAGA GAGAATACAC GAAGAAGAGT ATATTCAGAG CCACTGCATG GCATTTTGAG 000480
000481 TACAGGAGGT TTTCAGGAAC GATCTTTGCT TCATTAGTCT CCCCTGTGGG CTCCTGATGT AGGGAGCTAT CAGGGTATAC 000560
000561 CAAGATGAGC ACTGAGACAG GCCTTTCTAG GTCTGAGGCT GAGGAAAGCA GCGGCAACTT GGTGCCTGTC CCCCAGAGCT 000640
000641 GTCTACAGTT CAGAAGCCAA AAGCACAGCT ACTTCTAATT TGGGGATGCA GTAGAGTGCC TACTGATCCA GGTGGACAAA 000720
000721 ACAAATCTTT TTTGGAAACC AACGAAACAA AAATAATCTG GAGCTGTCTT GGTTGAAGCA GCGTGCGGGA TTCAGACACC 000800
000801 TCCCACTCAG ACCCCTGCCC TTCCTTCAAC ATTGGCATCT AAAGAATCTC TCCAGCGTTT GGAGGAAATC AAGTTGGAAG 000880
000881 TTAAGCAAGA AGCAACACAA AAAACTGAGT AACTACAAAG AAGTAAAAAG TAAAAACTCT GCAAGTTGAA TTGTTAGCTG 000960
000961 GCAGGCTACC ATGTGATATT GGCTCAGAAT TGTCTTGTGT TAGTAAAGAT ACAAACATTT GAATTCTATT TATGAACTTT 001040
001041 GAATTCTGCT TCTGTAATTA GACTTTTTTT TTTTTTTTTG GACAGAGTCT CACTCTGTCG CTTAGGCTGG ACTGCAGCGG 001120
001121 AATGATCTCA GCTCACTGCA AACTCCGTCT CCCGGGTTCA AATGATTCTC CTGCCTCAGC CTCCCCAGTA GCTGTAGCTG 001200
001201 GGATTACAGG TGTGGATCAC CACGCGCAGC TGAATTTTTT TTTGTATTTT CAGTACAGAC GGGGTTTCAC CATGTTGGCC 001280
001281 AGGCTGGTCT CAAACTTCTG ACCTCAAATC ATCCACTTGC CTTCGCTTCC CAATGTGCTG GGATTACAGG CATGAGCCAG 001360
001361 TGTGCCCAGC CTGCATGTTT TTTGTTTGTT TGTTTGTTTG TTTGTTTTTT GAGATGGAGT ATTGCTCTGT TGCTCAGGCT 001440
001441 GGAGCGCGCG ATCTCAGCTC ACCGCAACCT CCGCCTTCCA GATTCAAGCA ATTCTCCTGC CTCAGCTTCC CAAGTAGCTG 001520
001521 GGACTGTTAC AGGTGCATGC TGCCACGCCC AGCTAATTTT TTTGTATTTT AGTAGAGAAG GGGTTTCACC ATGTTGCCCA 001600
001601 GGCTGGTCGG GAACTCCTGA GCTCAGGCAA TCCGCCTGCC TC
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