Difference between revisions of "Lnc-ERLEC1-1:1"

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sequence = <dnaseq>CAGGGTAAAAAATCTAAAACTTTCACATCAAATCTTAAGATGTCAACAAACTACAAAGCAAATCAACAGATACTGACACATCAGATGAAAGAAAACCATAACTGCCAACTTTTCAGTTGAATCTTGTAGGTTTTGATCCGCCACTGATCTCAAGTTAGAATAAAGTCCATTACTATCAGAAACAAAAACTGTTTACATAAGATCCTATAGCCTCCATGACTTTAAACGGAGGGGACTGGAATCTGCTTGGCTGAAGTGCTGTCATATTCCTGCACTAAGTCATTAGTGGTGTGATAATGCATGGCAATATATGAATTGGCAAATCCAAAAGAGTTTACTGGCTGTAAGTTACATGGGCTGCTCTCCTCCTGGGAAGGGCTGCTGTTATAGATGCTGTAGTAAGGTTCAATCCGAGTGTTGATGGGGGTCGAGCTGCTCTGACCACAGTGTTGATGTCCAGCAGAGATCTTGGGACTCACCATACTTTCTTTTGAATGACTTGGGCCACAAGCCTGGTCCACAAATTTCTTCTGTGGCTTTGGAGATAACATGTAGGCAGAGTTTGTTTCATGATGGGAGGATTTGTTTCTGTTGACTTCGAGGTTCCCTTTTCCCATGGCTCGAAGTCGAGTCTTTTGTTTGCAGCAGAAAAAACCCAGGCCTATGTATTGGAGGCACCAGAGCACTTTCCTTCTCAGCCCTGCACTGTTCCGAGAATATATAAAAGGGTTTAATCCTGACTTGAAAAATATAAGAGTAAATCCAAACAATTCAAACTGGTAAAGAATGAAGCTCCCATTGCTGGAGAGAACCACCTGTACCAAGGAAATCCCCAGTGGAAGACAGCACACCAGGACTGACAGCACAATGATCACACAGGTGACCACGGCTTTGGAATCCTTGGCAGTGGAGAGGTTGATGGCTGATACGAGCTGGAGTCGGCTTGCTGCAGGGGTGACCAGTTGGTTGGGACTCTTGGTATATCCACGGGTCTGAACGTGCTGCAGTTTGTTGTAATTCTGGTTCCTATACAGAGCCGGCATGGCACACTGGATGGGATCTCCACCTCCCTGCACAGGGACCCCCATGAAAGGCTGTGGTCTGGAAGCATCGACTGTGATTACAGGGGGGCACTTTCTGACTTGAGCGTTCTTCCGCAGGGTCTGAGCAATCATGATGTAAGAGACAGAGACCACAGCAACACAGAAGGTGAAGTCGACCACATAGAGAGACAAAATGGCTTTCCCTTTTCCAGCAATCAGACTGGACATGGGAAGACAGAGGTGGGACTTGCTGGTTTTCAAGGTAGCCAAGGTGGCAAGGGTGAAACTGGTGGCCCAGAGAAGCAGGGTGAGGAGTACGGTGCAGGGAAAGGAGGCCGTGCGATTAGGCTGTTTCCCCAACACCATCCGGAGCCGGTGCAGGGCGATCACTGCCACTGTCTTCAGAGACATGATGATGAAGCCTGAACTGGTGAGATGGAAAGTGAAGCAGAAAGCATCCGGGATACTACTGGCTGAGCTGAAGAATAACACAAAGGTGAACATGGGGGCTGTCACTCCACAAATGAAGAGGTCACAGAAGGACAGGTTCAGGATCATGAAATCAAAGTTGGTTCTGAATTTCCTGAAGGCTGGATCGAAGAAGGACAAGAAGACAATGAAGTTGCCATAGGAACCCAGGCAGAAGATGACCGCCAGTAGAAAAGTACAGGTCACCAAGGTGGCTGTGTGGATGAGATCCTGAAGACCCTCCTGGAGAGAGGTGCTGTTTCCTTCCTGTGAGTGAGGCACATGGAGCGAGGTGGCATTGGGGGCATCCTGAAGGTGGCCTGTTGAGTTCATTTTCGGAGAGAAATGTCTCCTTCTTCTGCTCCCCAAAAATACTCAGTGAGTCAGGGCCTCAGCTCACAGATGAGCAATATGTGACAAAAGAGGCCCAAGACAGATAAGCCTACACACAACCGCAGCGCCGCCCCTCCTCCATCTCGCAGTCCGGACCCCAGCTCCGCCTGCCGCTCTGGATGATGCAGGACTAGAGGCATCATCGCCATCGC</dnaseq>|
 
sequence = <dnaseq>CAGGGTAAAAAATCTAAAACTTTCACATCAAATCTTAAGATGTCAACAAACTACAAAGCAAATCAACAGATACTGACACATCAGATGAAAGAAAACCATAACTGCCAACTTTTCAGTTGAATCTTGTAGGTTTTGATCCGCCACTGATCTCAAGTTAGAATAAAGTCCATTACTATCAGAAACAAAAACTGTTTACATAAGATCCTATAGCCTCCATGACTTTAAACGGAGGGGACTGGAATCTGCTTGGCTGAAGTGCTGTCATATTCCTGCACTAAGTCATTAGTGGTGTGATAATGCATGGCAATATATGAATTGGCAAATCCAAAAGAGTTTACTGGCTGTAAGTTACATGGGCTGCTCTCCTCCTGGGAAGGGCTGCTGTTATAGATGCTGTAGTAAGGTTCAATCCGAGTGTTGATGGGGGTCGAGCTGCTCTGACCACAGTGTTGATGTCCAGCAGAGATCTTGGGACTCACCATACTTTCTTTTGAATGACTTGGGCCACAAGCCTGGTCCACAAATTTCTTCTGTGGCTTTGGAGATAACATGTAGGCAGAGTTTGTTTCATGATGGGAGGATTTGTTTCTGTTGACTTCGAGGTTCCCTTTTCCCATGGCTCGAAGTCGAGTCTTTTGTTTGCAGCAGAAAAAACCCAGGCCTATGTATTGGAGGCACCAGAGCACTTTCCTTCTCAGCCCTGCACTGTTCCGAGAATATATAAAAGGGTTTAATCCTGACTTGAAAAATATAAGAGTAAATCCAAACAATTCAAACTGGTAAAGAATGAAGCTCCCATTGCTGGAGAGAACCACCTGTACCAAGGAAATCCCCAGTGGAAGACAGCACACCAGGACTGACAGCACAATGATCACACAGGTGACCACGGCTTTGGAATCCTTGGCAGTGGAGAGGTTGATGGCTGATACGAGCTGGAGTCGGCTTGCTGCAGGGGTGACCAGTTGGTTGGGACTCTTGGTATATCCACGGGTCTGAACGTGCTGCAGTTTGTTGTAATTCTGGTTCCTATACAGAGCCGGCATGGCACACTGGATGGGATCTCCACCTCCCTGCACAGGGACCCCCATGAAAGGCTGTGGTCTGGAAGCATCGACTGTGATTACAGGGGGGCACTTTCTGACTTGAGCGTTCTTCCGCAGGGTCTGAGCAATCATGATGTAAGAGACAGAGACCACAGCAACACAGAAGGTGAAGTCGACCACATAGAGAGACAAAATGGCTTTCCCTTTTCCAGCAATCAGACTGGACATGGGAAGACAGAGGTGGGACTTGCTGGTTTTCAAGGTAGCCAAGGTGGCAAGGGTGAAACTGGTGGCCCAGAGAAGCAGGGTGAGGAGTACGGTGCAGGGAAAGGAGGCCGTGCGATTAGGCTGTTTCCCCAACACCATCCGGAGCCGGTGCAGGGCGATCACTGCCACTGTCTTCAGAGACATGATGATGAAGCCTGAACTGGTGAGATGGAAAGTGAAGCAGAAAGCATCCGGGATACTACTGGCTGAGCTGAAGAATAACACAAAGGTGAACATGGGGGCTGTCACTCCACAAATGAAGAGGTCACAGAAGGACAGGTTCAGGATCATGAAATCAAAGTTGGTTCTGAATTTCCTGAAGGCTGGATCGAAGAAGGACAAGAAGACAATGAAGTTGCCATAGGAACCCAGGCAGAAGATGACCGCCAGTAGAAAAGTACAGGTCACCAAGGTGGCTGTGTGGATGAGATCCTGAAGACCCTCCTGGAGAGAGGTGCTGTTTCCTTCCTGTGAGTGAGGCACATGGAGCGAGGTGGCATTGGGGGCATCCTGAAGGTGGCCTGTTGAGTTCATTTTCGGAGAGAAATGTCTCCTTCTTCTGCTCCCCAAAAATACTCAGTGAGTCAGGGCCTCAGCTCACAGATGAGCAATATGTGACAAAAGAGGCCCAAGACAGATAAGCCTACACACAACCGCAGCGCCGCCCCTCCTCCATCTCGCAGTCCGGACCCCAGCTCCGCCTGCCGCTCTGGATGATGCAGGACTAGAGGCATCATCGCCATCGC</dnaseq>|
 
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[[Category:Antisense]][[Category:lnc-ERLEC1-1]]
+
[[Category:Antisense]][[Category:lnc-ERLEC1-1]][[Category:Transcripts]]

Latest revision as of 04:10, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-ERLEC1-1:1

Source

LNCipedia2.1

Same with

,

Classification

antisense

Length

2056 nt

Genomic location

chr2+:54080050..54087068

Exon number

2

Exons

54080050..54082012,54086976..54087068

Genome context

Sequence
000001 CAGGGTAAAA AATCTAAAAC TTTCACATCA AATCTTAAGA TGTCAACAAA CTACAAAGCA AATCAACAGA TACTGACACA 000080
000081 TCAGATGAAA GAAAACCATA ACTGCCAACT TTTCAGTTGA ATCTTGTAGG TTTTGATCCG CCACTGATCT CAAGTTAGAA 000160
000161 TAAAGTCCAT TACTATCAGA AACAAAAACT GTTTACATAA GATCCTATAG CCTCCATGAC TTTAAACGGA GGGGACTGGA 000240
000241 ATCTGCTTGG CTGAAGTGCT GTCATATTCC TGCACTAAGT CATTAGTGGT GTGATAATGC ATGGCAATAT ATGAATTGGC 000320
000321 AAATCCAAAA GAGTTTACTG GCTGTAAGTT ACATGGGCTG CTCTCCTCCT GGGAAGGGCT GCTGTTATAG ATGCTGTAGT 000400
000401 AAGGTTCAAT CCGAGTGTTG ATGGGGGTCG AGCTGCTCTG ACCACAGTGT TGATGTCCAG CAGAGATCTT GGGACTCACC 000480
000481 ATACTTTCTT TTGAATGACT TGGGCCACAA GCCTGGTCCA CAAATTTCTT CTGTGGCTTT GGAGATAACA TGTAGGCAGA 000560
000561 GTTTGTTTCA TGATGGGAGG ATTTGTTTCT GTTGACTTCG AGGTTCCCTT TTCCCATGGC TCGAAGTCGA GTCTTTTGTT 000640
000641 TGCAGCAGAA AAAACCCAGG CCTATGTATT GGAGGCACCA GAGCACTTTC CTTCTCAGCC CTGCACTGTT CCGAGAATAT 000720
000721 ATAAAAGGGT TTAATCCTGA CTTGAAAAAT ATAAGAGTAA ATCCAAACAA TTCAAACTGG TAAAGAATGA AGCTCCCATT 000800
000801 GCTGGAGAGA ACCACCTGTA CCAAGGAAAT CCCCAGTGGA AGACAGCACA CCAGGACTGA CAGCACAATG ATCACACAGG 000880
000881 TGACCACGGC TTTGGAATCC TTGGCAGTGG AGAGGTTGAT GGCTGATACG AGCTGGAGTC GGCTTGCTGC AGGGGTGACC 000960
000961 AGTTGGTTGG GACTCTTGGT ATATCCACGG GTCTGAACGT GCTGCAGTTT GTTGTAATTC TGGTTCCTAT ACAGAGCCGG 001040
001041 CATGGCACAC TGGATGGGAT CTCCACCTCC CTGCACAGGG ACCCCCATGA AAGGCTGTGG TCTGGAAGCA TCGACTGTGA 001120
001121 TTACAGGGGG GCACTTTCTG ACTTGAGCGT TCTTCCGCAG GGTCTGAGCA ATCATGATGT AAGAGACAGA GACCACAGCA 001200
001201 ACACAGAAGG TGAAGTCGAC CACATAGAGA GACAAAATGG CTTTCCCTTT TCCAGCAATC AGACTGGACA TGGGAAGACA 001280
001281 GAGGTGGGAC TTGCTGGTTT TCAAGGTAGC CAAGGTGGCA AGGGTGAAAC TGGTGGCCCA GAGAAGCAGG GTGAGGAGTA 001360
001361 CGGTGCAGGG AAAGGAGGCC GTGCGATTAG GCTGTTTCCC CAACACCATC CGGAGCCGGT GCAGGGCGAT CACTGCCACT 001440
001441 GTCTTCAGAG ACATGATGAT GAAGCCTGAA CTGGTGAGAT GGAAAGTGAA GCAGAAAGCA TCCGGGATAC TACTGGCTGA 001520
001521 GCTGAAGAAT AACACAAAGG TGAACATGGG GGCTGTCACT CCACAAATGA AGAGGTCACA GAAGGACAGG TTCAGGATCA 001600
001601 TGAAATCAAA GTTGGTTCTG AATTTCCTGA AGGCTGGATC GAAGAAGGAC AAGAAGACAA TGAAGTTGCC ATAGGAACCC 001680
001681 AGGCAGAAGA TGACCGCCAG TAGAAAAGTA CAGGTCACCA AGGTGGCTGT GTGGATGAGA TCCTGAAGAC CCTCCTGGAG 001760
001761 AGAGGTGCTG TTTCCTTCCT GTGAGTGAGG CACATGGAGC GAGGTGGCAT TGGGGGCATC CTGAAGGTGG CCTGTTGAGT 001840
001841 TCATTTTCGG AGAGAAATGT CTCCTTCTTC TGCTCCCCAA AAATACTCAG TGAGTCAGGG CCTCAGCTCA CAGATGAGCA 001920
001921 ATATGTGACA AAAGAGGCCC AAGACAGATA AGCCTACACA CAACCGCAGC GCCGCCCCTC CTCCATCTCG CAGTCCGGAC 002000
002001 CCCAGCTCCG CCTGCCGCTC TGGATGATGC AGGACTAGAG GCATCATCGC CATCGC
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