Difference between revisions of "Lnc-GGCT-1:19"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>CTTGTGATAGGGAGACAGGAGTCCTAGGAAGGAAATGGAACTGGTGATAGGGAGACAAGAGTCCTAGGAAGGAAATGGAACTTGTGATAGGGAGACAAGAGTCCTAGGAAATGGAAGGAGAGCACGTTTCACTCTGTCCAGCAGAGGGCAGCAGCTACCCACAAATCAACAGCTGAGCAAGGCCAGGGCTGTGTGGGAGCTATGCACAGGTTCTGCCTCCAGAAGCCTTCAGTGCCTGCCTCTGAGCCAGAGGGTTCCAAGCAGAAGAGGTCCCGCCCCCGGAGAGGGACCTCAGAGAGGTCCTCCAAGCCCCTCTCAGCTCTTACTTACGGCATCCCAGATGCCCTATTCCTCTTCTGCAGAGAGAAGGTGGTTCAGCCACTAAATGGTGCTGGGACCTCGCAGTTTGGTGGGAAGGAGGAAGCTTACTCAAGCAAGGAATATGAGACAGGCAAAAACCCACGCATAAGCCAAAAGCCCCTCCAAAGCGAGGTGTTGTTCCAGGCTGACAAGTGTCCAGCAGGGTGGACTTCAGACTCCCTGTTAGGAACTGAATTGTGTCCCCCAAAAAGAGAAAGTCACCCCAGGGTATGACCTAATTCAGGAAAGGTCATTGCAGATGCATTTAATTAAATGAAGATGAGCTCATGCTGGAGTAGGGTGGACTCTGAACCCAGTGGGACAAGCGTCCTTATTAAGAAGAGGGAAATCTGGACACACACAGAGCAGAGACCGCCGTGTGAAGATGGAGGCAGAGATCGGAGAGATGCTGCCACACGCCACAAATGCCTGGGGCTCCCAGAAACTACACGGAGCCTCCCCCAGCGGCTTCAGCAGGAGCATGGCTCGGCCAACACTTTGATCTTGGTCTTCCAGCCTCCAGAACGGTGAGTCGTTTTCCTAAAATTCCCTTTTCCACTGGTGTGTGGTGCAAGATGAGGCACATTTTCCATGGATGGTGAACAGAGGGAGGAGCCTTTTGATCACAACCAGGTCACCCCACTTCTAAGCCACTGTGCCTCCAGCCCCACAAGACTAAGGAGAGAGAGCGCAGCGTGGTGGAGAGTGAGCTGTGCTGGGACCATTGTTTCCGTAACCTCGTTTTCTGTGTCCAGCTGACACACCTTCAAAGTGGCATCAGGTCCTAAACTGTAGCTTGCAATGTGCCTGTTTCCAGAAACCAAGGTGAAAGTGCTTTTAGACAGTGTTCCCATGCAAGAGTCCCTTCCCAGCTTTTTTCTGGAAATGCATGTTTCTCTGAACTCTGAGTCCCAAGAAAAATCACTTGAGACACCAAGAAAATGGGGGAAGTGCTAAAATTGTGTGGGAATTCAAGCTTAACAATAAACATCAAGACATTTTTGATAAAAATGAATCCACTGACATCGGGGAGGAGCAAGAGAACAGCACGCTGACACTGGGTCAGAGGCTAAGACCGACATTTCTGGGAACCACTCCCGGAAGGGCACAGAGGAGACGCTTTCAGCCTCTCATCAGCCAGCCTGGCCTGTAGCTGCTGCACGTTATGAGTGTGTTCCTGGCATGACTGCTTCTAACAGTGAGTTTTCTGGCAAATCAAATAAATACTAATAAGTCTGTATGCACATTATACTTTATACAAATCCTATGAGTGATGTTCCAGAAATAACAAGTTTTGAAGGCAAAATAAGTCCTTAAATTGGCAACTTTGACACATAATTCCATGTAGTAGTTAATCTTGCTAGAAGATCCCAATGTTGTTATTCTAATACAATCTGATAATGTTCACTGGCATTTTCCACTGTTGGCATCTTTACTATAGCCTACAGTTGTTTGTTTGTTTATTTGAGATGGAGTCTTGCTCTGTTGCCTAGGCTAGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCCCCCTCCCAGGTTCAAGCAGTTCTCCTGCCTCGGCCTCCCTAGAAGCTGGGATTACAGGCACGTGCTACCACGCCCAGCTAATTTTTGTATTTTTGGTAGAGACGTGGTTTCATCATATTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCAGCCTGTCTCGGCCTCCCACACACAGTGCTGGGGTTACAGGTGTGAGCCACGATTCCTGGCTGCCTACAGTTCTTTGTAAAGCAGACAAAATAGTTTCATTTTTTAAAGAAATGAACATATATGAGGCAACCTGTACCTAACTTAGGAGTTCAGAAATTCCCTGGACTGCCTATACATTTTGGTTTCTCATTCCTAATTCCCAAAGATTAAAATCTGTCAGGAATTTGGAAACATTGAATCACAGGCCAAAATAGGACCATGTCTCCATTCATTCATTCATTCAACAATTATTTATTGAGCGCATGCTATTTTTCAGGCACTGTGCCACATATTGAGAATAGAGTAGTGAGTAAGACAAAGTCATCACTTTAGGGAGTTTATATTTTAGAGGAGAGAAAGACAAATGAAAGTGTTTAGGCTGGGCATGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGTCAAGGCAGGTGGATCACCTGAGCTCAGGAGTTCAAGACCAGCCTGGGCAACAATCCCATCTCTAACAAAAACATAAAAAATTAACCAGGTGTGGTAGCACATGCCTGTGGTCTCAGCAACTTGGGAGGCTGAGGTGGAAGGATCTCTTGAGCCTGGGAGGCAGAGGTTGCAGTGAGCTGAGGTTGTGACACTGGACTTCAACCTGAGTGACAGATCCCATCTCAAAAACAACCCTGGGCCGGGTGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGAAGATCTTGAGGTCAGGAGATTGAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCATGGTGGCGGTTGCCTATAGTCCCAACTACTCGGGAGGCTGAGGCTGGAGAATTGCTTGAACCCGGGAGGCAGAAGTAGCAGTGAGCCGAGATTGCACCGCTGCACTCCAGCCTGGGCAACAGAGTGAGACTCCATCTCAAAAG</dnaseq>| | sequence = <dnaseq>CTTGTGATAGGGAGACAGGAGTCCTAGGAAGGAAATGGAACTGGTGATAGGGAGACAAGAGTCCTAGGAAGGAAATGGAACTTGTGATAGGGAGACAAGAGTCCTAGGAAATGGAAGGAGAGCACGTTTCACTCTGTCCAGCAGAGGGCAGCAGCTACCCACAAATCAACAGCTGAGCAAGGCCAGGGCTGTGTGGGAGCTATGCACAGGTTCTGCCTCCAGAAGCCTTCAGTGCCTGCCTCTGAGCCAGAGGGTTCCAAGCAGAAGAGGTCCCGCCCCCGGAGAGGGACCTCAGAGAGGTCCTCCAAGCCCCTCTCAGCTCTTACTTACGGCATCCCAGATGCCCTATTCCTCTTCTGCAGAGAGAAGGTGGTTCAGCCACTAAATGGTGCTGGGACCTCGCAGTTTGGTGGGAAGGAGGAAGCTTACTCAAGCAAGGAATATGAGACAGGCAAAAACCCACGCATAAGCCAAAAGCCCCTCCAAAGCGAGGTGTTGTTCCAGGCTGACAAGTGTCCAGCAGGGTGGACTTCAGACTCCCTGTTAGGAACTGAATTGTGTCCCCCAAAAAGAGAAAGTCACCCCAGGGTATGACCTAATTCAGGAAAGGTCATTGCAGATGCATTTAATTAAATGAAGATGAGCTCATGCTGGAGTAGGGTGGACTCTGAACCCAGTGGGACAAGCGTCCTTATTAAGAAGAGGGAAATCTGGACACACACAGAGCAGAGACCGCCGTGTGAAGATGGAGGCAGAGATCGGAGAGATGCTGCCACACGCCACAAATGCCTGGGGCTCCCAGAAACTACACGGAGCCTCCCCCAGCGGCTTCAGCAGGAGCATGGCTCGGCCAACACTTTGATCTTGGTCTTCCAGCCTCCAGAACGGTGAGTCGTTTTCCTAAAATTCCCTTTTCCACTGGTGTGTGGTGCAAGATGAGGCACATTTTCCATGGATGGTGAACAGAGGGAGGAGCCTTTTGATCACAACCAGGTCACCCCACTTCTAAGCCACTGTGCCTCCAGCCCCACAAGACTAAGGAGAGAGAGCGCAGCGTGGTGGAGAGTGAGCTGTGCTGGGACCATTGTTTCCGTAACCTCGTTTTCTGTGTCCAGCTGACACACCTTCAAAGTGGCATCAGGTCCTAAACTGTAGCTTGCAATGTGCCTGTTTCCAGAAACCAAGGTGAAAGTGCTTTTAGACAGTGTTCCCATGCAAGAGTCCCTTCCCAGCTTTTTTCTGGAAATGCATGTTTCTCTGAACTCTGAGTCCCAAGAAAAATCACTTGAGACACCAAGAAAATGGGGGAAGTGCTAAAATTGTGTGGGAATTCAAGCTTAACAATAAACATCAAGACATTTTTGATAAAAATGAATCCACTGACATCGGGGAGGAGCAAGAGAACAGCACGCTGACACTGGGTCAGAGGCTAAGACCGACATTTCTGGGAACCACTCCCGGAAGGGCACAGAGGAGACGCTTTCAGCCTCTCATCAGCCAGCCTGGCCTGTAGCTGCTGCACGTTATGAGTGTGTTCCTGGCATGACTGCTTCTAACAGTGAGTTTTCTGGCAAATCAAATAAATACTAATAAGTCTGTATGCACATTATACTTTATACAAATCCTATGAGTGATGTTCCAGAAATAACAAGTTTTGAAGGCAAAATAAGTCCTTAAATTGGCAACTTTGACACATAATTCCATGTAGTAGTTAATCTTGCTAGAAGATCCCAATGTTGTTATTCTAATACAATCTGATAATGTTCACTGGCATTTTCCACTGTTGGCATCTTTACTATAGCCTACAGTTGTTTGTTTGTTTATTTGAGATGGAGTCTTGCTCTGTTGCCTAGGCTAGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCCCCCTCCCAGGTTCAAGCAGTTCTCCTGCCTCGGCCTCCCTAGAAGCTGGGATTACAGGCACGTGCTACCACGCCCAGCTAATTTTTGTATTTTTGGTAGAGACGTGGTTTCATCATATTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCAGCCTGTCTCGGCCTCCCACACACAGTGCTGGGGTTACAGGTGTGAGCCACGATTCCTGGCTGCCTACAGTTCTTTGTAAAGCAGACAAAATAGTTTCATTTTTTAAAGAAATGAACATATATGAGGCAACCTGTACCTAACTTAGGAGTTCAGAAATTCCCTGGACTGCCTATACATTTTGGTTTCTCATTCCTAATTCCCAAAGATTAAAATCTGTCAGGAATTTGGAAACATTGAATCACAGGCCAAAATAGGACCATGTCTCCATTCATTCATTCATTCAACAATTATTTATTGAGCGCATGCTATTTTTCAGGCACTGTGCCACATATTGAGAATAGAGTAGTGAGTAAGACAAAGTCATCACTTTAGGGAGTTTATATTTTAGAGGAGAGAAAGACAAATGAAAGTGTTTAGGCTGGGCATGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGTCAAGGCAGGTGGATCACCTGAGCTCAGGAGTTCAAGACCAGCCTGGGCAACAATCCCATCTCTAACAAAAACATAAAAAATTAACCAGGTGTGGTAGCACATGCCTGTGGTCTCAGCAACTTGGGAGGCTGAGGTGGAAGGATCTCTTGAGCCTGGGAGGCAGAGGTTGCAGTGAGCTGAGGTTGTGACACTGGACTTCAACCTGAGTGACAGATCCCATCTCAAAAACAACCCTGGGCCGGGTGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGAAGATCTTGAGGTCAGGAGATTGAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCATGGTGGCGGTTGCCTATAGTCCCAACTACTCGGGAGGCTGAGGCTGGAGAATTGCTTGAACCCGGGAGGCAGAAGTAGCAGTGAGCCGAGATTGCACCGCTGCACTCCAGCCTGGGCAACAGAGTGAGACTCCATCTCAAAAG</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:lnc-GGCT-1]][[Category:Transcripts]] |
Latest revision as of 04:20, 17 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
lnc-GGCT-1:19 |
Source |
LNCipedia2.1 |
Same with |
, |
Classification |
intergenic |
Length |
3036 nt |
Genomic location |
chr7-:30599604..30604233 |
Exon number |
2 |
Exons |
30599604..30601744,30603339..30604233 |
Genome context |
|
Sequence |
000001 CTTGTGATAG GGAGACAGGA GTCCTAGGAA GGAAATGGAA CTGGTGATAG GGAGACAAGA GTCCTAGGAA GGAAATGGAA 000080
000081 CTTGTGATAG GGAGACAAGA GTCCTAGGAA ATGGAAGGAG AGCACGTTTC ACTCTGTCCA GCAGAGGGCA GCAGCTACCC 000160 000161 ACAAATCAAC AGCTGAGCAA GGCCAGGGCT GTGTGGGAGC TATGCACAGG TTCTGCCTCC AGAAGCCTTC AGTGCCTGCC 000240 000241 TCTGAGCCAG AGGGTTCCAA GCAGAAGAGG TCCCGCCCCC GGAGAGGGAC CTCAGAGAGG TCCTCCAAGC CCCTCTCAGC 000320 000321 TCTTACTTAC GGCATCCCAG ATGCCCTATT CCTCTTCTGC AGAGAGAAGG TGGTTCAGCC ACTAAATGGT GCTGGGACCT 000400 000401 CGCAGTTTGG TGGGAAGGAG GAAGCTTACT CAAGCAAGGA ATATGAGACA GGCAAAAACC CACGCATAAG CCAAAAGCCC 000480 000481 CTCCAAAGCG AGGTGTTGTT CCAGGCTGAC AAGTGTCCAG CAGGGTGGAC TTCAGACTCC CTGTTAGGAA CTGAATTGTG 000560 000561 TCCCCCAAAA AGAGAAAGTC ACCCCAGGGT ATGACCTAAT TCAGGAAAGG TCATTGCAGA TGCATTTAAT TAAATGAAGA 000640 000641 TGAGCTCATG CTGGAGTAGG GTGGACTCTG AACCCAGTGG GACAAGCGTC CTTATTAAGA AGAGGGAAAT CTGGACACAC 000720 000721 ACAGAGCAGA GACCGCCGTG TGAAGATGGA GGCAGAGATC GGAGAGATGC TGCCACACGC CACAAATGCC TGGGGCTCCC 000800 000801 AGAAACTACA CGGAGCCTCC CCCAGCGGCT TCAGCAGGAG CATGGCTCGG CCAACACTTT GATCTTGGTC TTCCAGCCTC 000880 000881 CAGAACGGTG AGTCGTTTTC CTAAAATTCC CTTTTCCACT GGTGTGTGGT GCAAGATGAG GCACATTTTC CATGGATGGT 000960 000961 GAACAGAGGG AGGAGCCTTT TGATCACAAC CAGGTCACCC CACTTCTAAG CCACTGTGCC TCCAGCCCCA CAAGACTAAG 001040 001041 GAGAGAGAGC GCAGCGTGGT GGAGAGTGAG CTGTGCTGGG ACCATTGTTT CCGTAACCTC GTTTTCTGTG TCCAGCTGAC 001120 001121 ACACCTTCAA AGTGGCATCA GGTCCTAAAC TGTAGCTTGC AATGTGCCTG TTTCCAGAAA CCAAGGTGAA AGTGCTTTTA 001200 001201 GACAGTGTTC CCATGCAAGA GTCCCTTCCC AGCTTTTTTC TGGAAATGCA TGTTTCTCTG AACTCTGAGT CCCAAGAAAA 001280 001281 ATCACTTGAG ACACCAAGAA AATGGGGGAA GTGCTAAAAT TGTGTGGGAA TTCAAGCTTA ACAATAAACA TCAAGACATT 001360 001361 TTTGATAAAA ATGAATCCAC TGACATCGGG GAGGAGCAAG AGAACAGCAC GCTGACACTG GGTCAGAGGC TAAGACCGAC 001440 001441 ATTTCTGGGA ACCACTCCCG GAAGGGCACA GAGGAGACGC TTTCAGCCTC TCATCAGCCA GCCTGGCCTG TAGCTGCTGC 001520 001521 ACGTTATGAG TGTGTTCCTG GCATGACTGC TTCTAACAGT GAGTTTTCTG GCAAATCAAA TAAATACTAA TAAGTCTGTA 001600 001601 TGCACATTAT ACTTTATACA AATCCTATGA GTGATGTTCC AGAAATAACA AGTTTTGAAG GCAAAATAAG TCCTTAAATT 001680 001681 GGCAACTTTG ACACATAATT CCATGTAGTA GTTAATCTTG CTAGAAGATC CCAATGTTGT TATTCTAATA CAATCTGATA 001760 001761 ATGTTCACTG GCATTTTCCA CTGTTGGCAT CTTTACTATA GCCTACAGTT GTTTGTTTGT TTATTTGAGA TGGAGTCTTG 001840 001841 CTCTGTTGCC TAGGCTAGAG TGCAGTGGCG TGATCTTGGC TCACTGCAAC CTCCCCCTCC CAGGTTCAAG CAGTTCTCCT 001920 001921 GCCTCGGCCT CCCTAGAAGC TGGGATTACA GGCACGTGCT ACCACGCCCA GCTAATTTTT GTATTTTTGG TAGAGACGTG 002000 002001 GTTTCATCAT ATTGGCCAGG CTGGTCTTGA ACTCCTGACC TCAGGTGATC AGCCTGTCTC GGCCTCCCAC ACACAGTGCT 002080 002081 GGGGTTACAG GTGTGAGCCA CGATTCCTGG CTGCCTACAG TTCTTTGTAA AGCAGACAAA ATAGTTTCAT TTTTTAAAGA 002160 002161 AATGAACATA TATGAGGCAA CCTGTACCTA ACTTAGGAGT TCAGAAATTC CCTGGACTGC CTATACATTT TGGTTTCTCA 002240 002241 TTCCTAATTC CCAAAGATTA AAATCTGTCA GGAATTTGGA AACATTGAAT CACAGGCCAA AATAGGACCA TGTCTCCATT 002320 002321 CATTCATTCA TTCAACAATT ATTTATTGAG CGCATGCTAT TTTTCAGGCA CTGTGCCACA TATTGAGAAT AGAGTAGTGA 002400 002401 GTAAGACAAA GTCATCACTT TAGGGAGTTT ATATTTTAGA GGAGAGAAAG ACAAATGAAA GTGTTTAGGC TGGGCATGGT 002480 002481 GGCTCACACC TGTAATCCCA GCACTTTGGG AGGTCAAGGC AGGTGGATCA CCTGAGCTCA GGAGTTCAAG ACCAGCCTGG 002560 002561 GCAACAATCC CATCTCTAAC AAAAACATAA AAAATTAACC AGGTGTGGTA GCACATGCCT GTGGTCTCAG CAACTTGGGA 002640 002641 GGCTGAGGTG GAAGGATCTC TTGAGCCTGG GAGGCAGAGG TTGCAGTGAG CTGAGGTTGT GACACTGGAC TTCAACCTGA 002720 002721 GTGACAGATC CCATCTCAAA AACAACCCTG GGCCGGGTGT GGTGGCTCAC ACCTGTAATC CCAGCACTTT GGGAGGCCGA 002800 002801 GGCAGGAAGA TCTTGAGGTC AGGAGATTGA GACCATCCTG GCTAACATGG TGAAACCCCG TCTCTACTAA AAATACAAAA 002880 002881 AATTAGCTGG GCATGGTGGC GGTTGCCTAT AGTCCCAACT ACTCGGGAGG CTGAGGCTGG AGAATTGCTT GAACCCGGGA 002960 002961 GGCAGAAGTA GCAGTGAGCC GAGATTGCAC CGCTGCACTC CAGCCTGGGC AACAGAGTGA GACTCCATCT CAAAAG |