Difference between revisions of "Lnc-GTF2F2-2:9"

Latest revision as of 04:23, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-GTF2F2-2:9
Source	LNCipedia2.1
Same with	NONHSAT033570
Classification	intergenic
Length	2284 nt
Genomic location	chr13+:45915648..45965872
Exon number	9
Exons	45915648..45915749,45918440..45918581,45951196..45951350,45952665..45952806,45953330..45954136,45957226..45957370,45963870..45963955,45965167..45965454,45965456..45965872
Genome context
Sequence	000001 ACGGGGCCGC CTGGAGAGGT GCTGGGAGCT GGGTGGAGCT TAGAGGAATT AAACTTTGGC CCTGCGCCTC GTCCAGCCTA 000080 000081 GGTTCCACCC TTTTCTGGGA ACAATGAATC TCGCTGTGTT GTCCAGGCTG GAGTGCAGTG GCACCATCTC GGCTCACTGC 000160 000161 AACCTCTGGC TCCCAGGTTC AAGCGATTCT CCTGCCTCAG CCCCCTGAGT AGCTGGGATT ACAGGCACGC GCCACCACTC 000240 000241 CCAGGCTCCG GTAGATTGCA AATGACCTGC TTTCTTTCTG TTCCCGGGCG TTTGGACCCC TGTCTTGGAC CGCTGTCGGA 000320 000321 TAGTAAATCC CAAGTAAGGT ACCTGCCGTC GGCAGATTTG AGCTTTCTTC TTGGACACCT AATACCCAGA GTCCTCCAGG 000400 000401 CTCCGGTAGA TTGCAAATGA CCTGCTTTCT TTCTGTTCCC GGGCGGCATC GGACCCGTCG GAGAGTAAAT CCCAAGTAAG 000480 000481 GTACCTGCCG TTGGCAGATT TGAGCTTTCT TCTTGGACAC CTAATACCCA CAGTCCTCCA GGCTCCGGTA GATTGCAAAT 000560 000561 GACCTGCTTT CTTTCTGTTC CCGGGTGGCA TCGACCCGTC GGAGAGTAAA TCCCAAGTAA GGTACCTGCC GTTGGCAGAT 000640 000641 TTGAGCTTTC TTCTTGGACA CCTAATACCC ACAGTCCTCC AGGTGAGTCC TAAGGATCTT AGGATACGCG ATGGGGGTCC 000720 000721 TAAGGCAGGG GGGGAAGAGG GGATGGCTGT CACCCAACCC AAAATGGGCG GCCTTTATGT TCAGGTTTTG CCCAAGAGTC 000800 000801 AGCTTATTTG CTTCTTGTAC TATCAGGGCA GTTGATGCCA CGGCCCTCAA ACATGAGGGG CCATCCTTTA GAAACCCTCT 000880 000881 CTAGTTGTTT AGACAACTAG GCCACCGGCC TCAGCCAGGG CCCCAGAGTT TCGGTTAAAA GTCCAGCTGC CATCTTTTCT 000960 000961 CTATCTGACG CATTCAATGG AAAAGGCTTT GTCAGATCGG GTAGCCCCAG GGCTGGGGCT GCCAGAAGTT TTTCCTTTAA 001040 001041 CTCCTGAAAG ACTTTTTGTT CTTGGGATCC CCATTCCAAA GGTTCCGTTC CCCGCCCCCT TTGTGACCTC ATACAAAGGC 001120 001121 TTGGCTAATA CTGCAAAGTT TGGGATCCAG TCTACAAAAC CCCACAGCTC CCAAGAATTC CCTTACCTGC CTTCTGCCCT 001200 001201 TAGGCTCCGG TAGATTGTAA ATAACCTGCT TTCTTTCTGT TCCCGGGCTG CGTTCGGACC CCTGTCGGAT AGTAAATCCC 001280 001281 AAGCAAGGTA CCTGCCGTCA GCAGATTTGA GCTTTCTTCT TGGACACCTA ATACCCACAG TCCTCCAGGC TCCGGTAGAT 001360 001361 TGCAAATGAC CTGCTTTCTT TCTGTTCCCG GGCTGCGTTC GGACCCCTGT CGGATAGTAA CTCCCAAGTA AGGTACCTGC 001440 001441 CGTCGGCAGA TTGGAGCTTT CTTCTTGGAG ACCTAATACC CACAGTCCTC CAGAAAAACA AACAAAGACA TGGATTTACT 001520 001521 GTGCATATTA GCAGATCCAT ACTGGAAAAT GCATGGAGGT TTCATATACA CCACTTACAG TTTTCAGCTC CTCAGTAGTG 001600 001601 ACAAAGCCAT ACCCATCATT GTCGATTCGA TCAACAATCT TCCCTAGCCT CTCCTTGCTC TCGTCCGGGG TGAGCTCGTC 001680 001681 GAAGTTCTTG GAGTCCTCCT TGCCCAGGAA GGCCTCGTGG TCGTACTGGA AGCTCTGGTT GTCCTCAGGG GGCCGCTCGC 001760 001761 CCAGCTCCGA GTCGGGCCGC ACCACGCGCT CTTTGCGCAC CGTGGGCTTG GCCCGCAGAA CCCGCGGCGC CAGCACCAGC 001840 001841 GCCAGCAGCA GCCCCAGGGC TAACCCCGGC GGCCACCGCG CGCCATCGTC CCGAGGAGAG GGCGGCCGGG AGGGAGACGC 001920 001921 TGAGCGAGCG ACAACAGCGG CAGCTCGGGA ATGGGGGCTC GGAGCGCGGC GGCCAAGTTT TATGTTAT

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 sequence = <dnaseq>ACGGGGCCGCCTGGAGAGGTGCTGGGAGCTGGGTGGAGCTTAGAGGAATTAAACTTTGGCCCTGCGCCTCGTCCAGCCTAGGTTCCACCCTTTTCTGGGAACAATGAATCTCGCTGTGTTGTCCAGGCTGGAGTGCAGTGGCACCATCTCGGCTCACTGCAACCTCTGGCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCCCCTGAGTAGCTGGGATTACAGGCACGCGCCACCACTCCCAGGCTCCGGTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCGTTTGGACCCCTGTCTTGGACCGCTGTCGGATAGTAAATCCCAAGTAAGGTACCTGCCGTCGGCAGATTTGAGCTTTCTTCTTGGACACCTAATACCCAGAGTCCTCCAGGCTCCGGTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCGGCATCGGACCCGTCGGAGAGTAAATCCCAAGTAAGGTACCTGCCGTTGGCAGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGGCTCCGGTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGTGGCATCGACCCGTCGGAGAGTAAATCCCAAGTAAGGTACCTGCCGTTGGCAGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGGTGAGTCCTAAGGATCTTAGGATACGCGATGGGGGTCCTAAGGCAGGGGGGGAAGAGGGGATGGCTGTCACCCAACCCAAAATGGGCGGCCTTTATGTTCAGGTTTTGCCCAAGAGTCAGCTTATTTGCTTCTTGTACTATCAGGGCAGTTGATGCCACGGCCCTCAAACATGAGGGGCCATCCTTTAGAAACCCTCTCTAGTTGTTTAGACAACTAGGCCACCGGCCTCAGCCAGGGCCCCAGAGTTTCGGTTAAAAGTCCAGCTGCCATCTTTTCTCTATCTGACGCATTCAATGGAAAAGGCTTTGTCAGATCGGGTAGCCCCAGGGCTGGGGCTGCCAGAAGTTTTTCCTTTAACTCCTGAAAGACTTTTTGTTCTTGGGATCCCCATTCCAAAGGTTCCGTTCCCCGCCCCCTTTGTGACCTCATACAAAGGCTTGGCTAATACTGCAAAGTTTGGGATCCAGTCTACAAAACCCCACAGCTCCCAAGAATTCCCTTACCTGCCTTCTGCCCTTAGGCTCCGGTAGATTGTAAATAACCTGCTTTCTTTCTGTTCCCGGGCTGCGTTCGGACCCCTGTCGGATAGTAAATCCCAAGCAAGGTACCTGCCGTCAGCAGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGGCTCCGGTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCTGCGTTCGGACCCCTGTCGGATAGTAACTCCCAAGTAAGGTACCTGCCGTCGGCAGATTGGAGCTTTCTTCTTGGAGACCTAATACCCACAGTCCTCCAGAAAAACAAACAAAGACATGGATTTACTGTGCATATTAGCAGATCCATACTGGAAAATGCATGGAGGTTTCATATACACCACTTACAGTTTTCAGCTCCTCAGTAGTGACAAAGCCATACCCATCATTGTCGATTCGATCAACAATCTTCCCTAGCCTCTCCTTGCTCTCGTCCGGGGTGAGCTCGTCGAAGTTCTTGGAGTCCTCCTTGCCCAGGAAGGCCTCGTGGTCGTACTGGAAGCTCTGGTTGTCCTCAGGGGGCCGCTCGCCCAGCTCCGAGTCGGGCCGCACCACGCGCTCTTTGCGCACCGTGGGCTTGGCCCGCAGAACCCGCGGCGCCAGCACCAGCGCCAGCAGCAGCCCCAGGGCTAACCCCGGCGGCCACCGCGCGCCATCGTCCCGAGGAGAGGGCGGCCGGGAGGGAGACGCTGAGCGAGCGACAACAGCGGCAGCTCGGGAATGGGGGCTCGGAGCGCGGCGGCCAAGTTTTATGTTATGTATATTTTACAAGTAAAAAAATTTTTTCACCTCAGCCTGAACTGAACACTAGCTGACAGACGTTTTGATTTCTTTGACCATCACGGAATCGTGGCCAAGCGCGGTGGCTCACATCTGTAATCCCAACACTTTGGGAGGTCAAGATGGGCGGATTGCTTGAATCCAGGTGTTTGAGATCAGCCTGGGCAACATGACAAAACCCTGTTTCTAGTAAAAATACAAAAATTAACCAGGCTCAAGCCATGACCATGCACCATTGCACTCCAGCCTAGGCGACAGAGCAGGACCCTGTCTC</dnaseq>|
 }}
-[[Category:Intergenic]][[Category:lnc-GTF2F2-2]]
+[[Category:Intergenic]][[Category:lnc-GTF2F2-2]][[Category:NONHSAG013413]][[Category:Transcripts]]