Difference between revisions of "Lnc-HPCAL1-1:11"
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sequence = <dnaseq>CTTGCCCTTTGAATGGTTTTAGGTGTTTCCGAAAAATCCAATCCACCCTCCAAGGTGGAAAGTGTGCCATCTCTGCCCATAATCCAAATGGCGTGCCTGAGGCATAGAAAGCAGCTTTCAGGGAGGCCTTCCTTCCTCTGAGCAATGGTGGCATCATCAGAAAAGTGGAGCTCCTCCAAAAGGATCTGCTGGAAGCAGAGGACGCCCATGTCGCCTGGTGACTCCCTCTGACCCAACAAGTTGCAGCACCTCTGCTGGGCTTTGCCACTGCCCCATTTTTGCCAGAGCCTCACCCTGGTGGGGCCCCACCTCTGGGAAGCCCCAGCGCCTGCAAGATTTTTTCCTCTCGTGACAGGGAGCAGCATGCGGAGGGCCCTTGCACAACCTGGGTCTTCAGGAAGTTCCTTGCCCAGGTGTTGGCCCAGCTCTCTTCATGGTTCCAAGAAGGCTGCCCCAGGAAGGCTTGTGGACAGAGGGAGAAGCATCTCTTCCTCTATGTCTCTTTTTATCTAAGAAACCAGTTTGACCAGCATCCTTCCCCTCGGCTCCCCAGGAGGAATGCACGGATCCCTTCGCCTTCCCCCATCCCTCCATGGTTGACTAAACCCACTAGGATCCACTCTTTTGCGTGGAAATGGGTTCAGGCCTCCCACGAAGAGCATGAAGATGCCCTCTGTTATGGGTTACATTATGTCCCCTGCCCCCGAGACCGTATGTTGAGTCCTAACCCTAGTATTGCAGAACGTGAATTTATTAGGAGATAGGGTCTTTATGGAGGTCATTAAGTTAAATGAGGGTGTTAGGGTGGGCTGGTGTCCTGATATAAAGGGGAAATTTGGGGCTGGGTGTAGTGGCTCACACATATAATCCCAGTGCCTCGAGAGGCCAAGGCAGGAGGATTGCTTGAGGGCAGGAGTTCAAGACCAGCTTGGGTAACATAGGGAGACCGGTATCTATAAAAAAAATTAAAAACAAAAAAATTAGCCGAGTGTGGTGGTGCATGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCGCTTGAGTCCAGGAATTTGAGGCTGCAGTGAGCCATAAAAAGATGGGGGACGATGGAGACGCACAGGGAAAACACCTTGTGAATGCGGCAGAGATAAGGGTGATGCCTCTACACACCGAGGAACTTCAGAGACAACCAGTAAGTCACTGGGAGCTCGGGGAAGGCACAGCGCAGATGCTCGCTGCCCTCAGAGGGAAGCCAGCCCGCCAACCCCTTGATCTCAGACCTCTGGCCCCTGGAACTGTGAGATGATAGATTTCTGTCGTTTAAGCACAGTGGTGCTGTGTTATAGCAGCCCTAGGGAACCATCCACTATCAGAACAAAAGCAGGGCTGGACTGCTAGAAGAAAGGAGAGGAGAATGGCAGAGGATACCCACCTTGGGGCTGAATCTGAGATCACTCCAGGGCTCCCCAGGTTGTTTTGAAGAATGGAGATGGATTTGTGCAGGGCTCACTGTAGAAGCTCAGTGCAGCATGCGACGCTTATAAGGCTGCAATCCCCAGAGCTCAGTCCCTGAAGAGCGCTGCATTCACAGACATCAGCCAGCAGACAAACCAGTACCTATTGTCCCTGACCCCCAGAATCCAGCAGACATATAAAAGATGGTTGTTAACCCCACTAAGTTTTGGGGTAATTTGTTATGCAGCCATGCAACTGAAAGAAGCAGCTACAATATTTTTATAATGAAATTCTTAGCCAGGACCCTCATAGCCTAGCAAGAAGTTCTGTCTGGAAGAGCCCAGCTTTGGGGTTGGGTATGTCTGGGTTTTAATATGTCAAGAGGGCAGGCCCTGGAGACGGAGCACATGGATTTGAATCCCAGCCTCTCATAGGCAGGTTAATTAATTTCCCTGAATCTCAGTTTCTTCATCTCTCAATGGAG</dnaseq>| | sequence = <dnaseq>CTTGCCCTTTGAATGGTTTTAGGTGTTTCCGAAAAATCCAATCCACCCTCCAAGGTGGAAAGTGTGCCATCTCTGCCCATAATCCAAATGGCGTGCCTGAGGCATAGAAAGCAGCTTTCAGGGAGGCCTTCCTTCCTCTGAGCAATGGTGGCATCATCAGAAAAGTGGAGCTCCTCCAAAAGGATCTGCTGGAAGCAGAGGACGCCCATGTCGCCTGGTGACTCCCTCTGACCCAACAAGTTGCAGCACCTCTGCTGGGCTTTGCCACTGCCCCATTTTTGCCAGAGCCTCACCCTGGTGGGGCCCCACCTCTGGGAAGCCCCAGCGCCTGCAAGATTTTTTCCTCTCGTGACAGGGAGCAGCATGCGGAGGGCCCTTGCACAACCTGGGTCTTCAGGAAGTTCCTTGCCCAGGTGTTGGCCCAGCTCTCTTCATGGTTCCAAGAAGGCTGCCCCAGGAAGGCTTGTGGACAGAGGGAGAAGCATCTCTTCCTCTATGTCTCTTTTTATCTAAGAAACCAGTTTGACCAGCATCCTTCCCCTCGGCTCCCCAGGAGGAATGCACGGATCCCTTCGCCTTCCCCCATCCCTCCATGGTTGACTAAACCCACTAGGATCCACTCTTTTGCGTGGAAATGGGTTCAGGCCTCCCACGAAGAGCATGAAGATGCCCTCTGTTATGGGTTACATTATGTCCCCTGCCCCCGAGACCGTATGTTGAGTCCTAACCCTAGTATTGCAGAACGTGAATTTATTAGGAGATAGGGTCTTTATGGAGGTCATTAAGTTAAATGAGGGTGTTAGGGTGGGCTGGTGTCCTGATATAAAGGGGAAATTTGGGGCTGGGTGTAGTGGCTCACACATATAATCCCAGTGCCTCGAGAGGCCAAGGCAGGAGGATTGCTTGAGGGCAGGAGTTCAAGACCAGCTTGGGTAACATAGGGAGACCGGTATCTATAAAAAAAATTAAAAACAAAAAAATTAGCCGAGTGTGGTGGTGCATGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCGCTTGAGTCCAGGAATTTGAGGCTGCAGTGAGCCATAAAAAGATGGGGGACGATGGAGACGCACAGGGAAAACACCTTGTGAATGCGGCAGAGATAAGGGTGATGCCTCTACACACCGAGGAACTTCAGAGACAACCAGTAAGTCACTGGGAGCTCGGGGAAGGCACAGCGCAGATGCTCGCTGCCCTCAGAGGGAAGCCAGCCCGCCAACCCCTTGATCTCAGACCTCTGGCCCCTGGAACTGTGAGATGATAGATTTCTGTCGTTTAAGCACAGTGGTGCTGTGTTATAGCAGCCCTAGGGAACCATCCACTATCAGAACAAAAGCAGGGCTGGACTGCTAGAAGAAAGGAGAGGAGAATGGCAGAGGATACCCACCTTGGGGCTGAATCTGAGATCACTCCAGGGCTCCCCAGGTTGTTTTGAAGAATGGAGATGGATTTGTGCAGGGCTCACTGTAGAAGCTCAGTGCAGCATGCGACGCTTATAAGGCTGCAATCCCCAGAGCTCAGTCCCTGAAGAGCGCTGCATTCACAGACATCAGCCAGCAGACAAACCAGTACCTATTGTCCCTGACCCCCAGAATCCAGCAGACATATAAAAGATGGTTGTTAACCCCACTAAGTTTTGGGGTAATTTGTTATGCAGCCATGCAACTGAAAGAAGCAGCTACAATATTTTTATAATGAAATTCTTAGCCAGGACCCTCATAGCCTAGCAAGAAGTTCTGTCTGGAAGAGCCCAGCTTTGGGGTTGGGTATGTCTGGGTTTTAATATGTCAAGAGGGCAGGCCCTGGAGACGGAGCACATGGATTTGAATCCCAGCCTCTCATAGGCAGGTTAATTAATTTCCCTGAATCTCAGTTTCTTCATCTCTCAATGGAG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-HPCAL1-1]] | + | [[Category:Intergenic]][[Category:lnc-HPCAL1-1]][[Category:NONHSAG026984]][[Category:Transcripts]] |
Latest revision as of 04:26, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
lnc-HPCAL1-1:11 |
| Source |
LNCipedia2.1 |
| Same with |
NONHSAT069116 |
| Classification |
intergenic |
| Length |
1929 nt |
| Genomic location |
chr2+:10592385..10597076 |
| Exon number |
3 |
| Exons |
10592385..10592595,10593995..10594184,10595549..10597076 |
| Genome context |
|
| Sequence |
000001 CTTGCCCTTT GAATGGTTTT AGGTGTTTCC GAAAAATCCA ATCCACCCTC CAAGGTGGAA AGTGTGCCAT CTCTGCCCAT 000080
000081 AATCCAAATG GCGTGCCTGA GGCATAGAAA GCAGCTTTCA GGGAGGCCTT CCTTCCTCTG AGCAATGGTG GCATCATCAG 000160 000161 AAAAGTGGAG CTCCTCCAAA AGGATCTGCT GGAAGCAGAG GACGCCCATG TCGCCTGGTG ACTCCCTCTG ACCCAACAAG 000240 000241 TTGCAGCACC TCTGCTGGGC TTTGCCACTG CCCCATTTTT GCCAGAGCCT CACCCTGGTG GGGCCCCACC TCTGGGAAGC 000320 000321 CCCAGCGCCT GCAAGATTTT TTCCTCTCGT GACAGGGAGC AGCATGCGGA GGGCCCTTGC ACAACCTGGG TCTTCAGGAA 000400 000401 GTTCCTTGCC CAGGTGTTGG CCCAGCTCTC TTCATGGTTC CAAGAAGGCT GCCCCAGGAA GGCTTGTGGA CAGAGGGAGA 000480 000481 AGCATCTCTT CCTCTATGTC TCTTTTTATC TAAGAAACCA GTTTGACCAG CATCCTTCCC CTCGGCTCCC CAGGAGGAAT 000560 000561 GCACGGATCC CTTCGCCTTC CCCCATCCCT CCATGGTTGA CTAAACCCAC TAGGATCCAC TCTTTTGCGT GGAAATGGGT 000640 000641 TCAGGCCTCC CACGAAGAGC ATGAAGATGC CCTCTGTTAT GGGTTACATT ATGTCCCCTG CCCCCGAGAC CGTATGTTGA 000720 000721 GTCCTAACCC TAGTATTGCA GAACGTGAAT TTATTAGGAG ATAGGGTCTT TATGGAGGTC ATTAAGTTAA ATGAGGGTGT 000800 000801 TAGGGTGGGC TGGTGTCCTG ATATAAAGGG GAAATTTGGG GCTGGGTGTA GTGGCTCACA CATATAATCC CAGTGCCTCG 000880 000881 AGAGGCCAAG GCAGGAGGAT TGCTTGAGGG CAGGAGTTCA AGACCAGCTT GGGTAACATA GGGAGACCGG TATCTATAAA 000960 000961 AAAAATTAAA AACAAAAAAA TTAGCCGAGT GTGGTGGTGC ATGCCTGTAG TCCCAGCTAC TCAGGAGGCT GAGGTGGGAG 001040 001041 GATCGCTTGA GTCCAGGAAT TTGAGGCTGC AGTGAGCCAT AAAAAGATGG GGGACGATGG AGACGCACAG GGAAAACACC 001120 001121 TTGTGAATGC GGCAGAGATA AGGGTGATGC CTCTACACAC CGAGGAACTT CAGAGACAAC CAGTAAGTCA CTGGGAGCTC 001200 001201 GGGGAAGGCA CAGCGCAGAT GCTCGCTGCC CTCAGAGGGA AGCCAGCCCG CCAACCCCTT GATCTCAGAC CTCTGGCCCC 001280 001281 TGGAACTGTG AGATGATAGA TTTCTGTCGT TTAAGCACAG TGGTGCTGTG TTATAGCAGC CCTAGGGAAC CATCCACTAT 001360 001361 CAGAACAAAA GCAGGGCTGG ACTGCTAGAA GAAAGGAGAG GAGAATGGCA GAGGATACCC ACCTTGGGGC TGAATCTGAG 001440 001441 ATCACTCCAG GGCTCCCCAG GTTGTTTTGA AGAATGGAGA TGGATTTGTG CAGGGCTCAC TGTAGAAGCT CAGTGCAGCA 001520 001521 TGCGACGCTT ATAAGGCTGC AATCCCCAGA GCTCAGTCCC TGAAGAGCGC TGCATTCACA GACATCAGCC AGCAGACAAA 001600 001601 CCAGTACCTA TTGTCCCTGA CCCCCAGAAT CCAGCAGACA TATAAAAGAT GGTTGTTAAC CCCACTAAGT TTTGGGGTAA 001680 001681 TTTGTTATGC AGCCATGCAA CTGAAAGAAG CAGCTACAAT ATTTTTATAA TGAAATTCTT AGCCAGGACC CTCATAGCCT 001760 001761 AGCAAGAAGT TCTGTCTGGA AGAGCCCAGC TTTGGGGTTG GGTATGTCTG GGTTTTAATA TGTCAAGAGG GCAGGCCCTG 001840 001841 GAGACGGAGC ACATGGATTT GAATCCCAGC CTCTCATAGG CAGGTTAATT AATTTCCCTG AATCTCAGTT TCTTCATCTC 001920 001921 TCAATGGAG |