Difference between revisions of "Lnc-LCP2-2:3"
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sequence = <dnaseq>GAGAAACAATGCATTTTATCATAGGGCCGGACAGCTATATGCACAAGATGCTACCTGCAGAGATTGGTTTTTGCCCAGATGTGCAGGAGAGATGCACAGAGAGGAAGAAATGCATACATGTGTGCAGGTTTTGGCGTGTGCACAAGAAGCCTGGAAGGATTTTCTTTGGATCTACAGTCAAAATGGATTTCCGAGAGGAAGCTGTCTGAAAACACACCTCTTCCCTGTGCTACATACGGTCCCATCTCTGCCAGCCAGGTTGTCAGGAAAGTGATCAGCACTGGCTTCAACTCTGGCTAGAGCTCTTTGGCCAATGTGATGGGCAGAAAACTGGAATGAGGACAGAAAAGCACCTCAGAGGTTTGAAGAGTCTAGTCTCTCACCACCTTGCTGTAGGTTTTCTGAATACTTCTGAGTTTAGGAGCATTTTTTCTCAACAGGCAAGTCAGGAGCTGCTAAGATAAACCATGGCAGTAAGCTCGAGCCAGTGTTCGTATTTGCCATTGATCGGCCACCAAGTGCTTGCTATGTGCCATGCATTGTGCTAAGCACTATCTCATTTAATATTTACAGCAATCTTATGAGGTAGATGCTACTGTTATCTCCATTTTACAGATGGGGAAACTGAGGCACAGAGTTCCACAGCTGGTAACTTGAGGAATAGGAATTCAACCACTGGAGAGTCTGGCTGGAGTTTTTTGTGGTAGGAGAAAATATGCTGTCTAAATTTGCCTTGGGAAACCATCATGGTGGTCACAAAACCACTTCTACGGCTTGCCTTGACCTAGCAGGAATGAAGATGTAAAGAAAGAATGAGCGCGTCATGGTTATGATGGGATGATGATGTCTGTTGTGTTGTTTGGTGTCAGTTTCTGTAACGCCTTTCTATTTCAATCAAGGCTATTATCTTTTCCTCTGTTTTAGTGAAGTTTCCTTGAAGTAGAAAATGGGAGTGTATTGGGCATCTCAGAGTTTTCAGCTGAACTGAAGGGTCTGATGGTAACTTTACCCCCAAATCTCTGAGAGAAAAGCAGGGAGTCCCTGCTTCAGCTCTGCTCAGAAGAGCCTCCCTCACATGGTGGTTTCTGTGTCACTAGACTGGTTAACCAAATGGTTCTTCTAAATACCCAACTTTTAATAGAAACTCCTGCGGCTTGGATTATTAAAGTCCTAACATGCTTATTTAATCGTGTTTCAAGTCCATCTATCTTTTTTGAGTCTAAGGAAGACTCACTAGGTCAGAAGGAGTAGAGGGAAGAGGATTAATACATGATTTTCTTTTTCCCCTTTTTCTTTTAACTTAGGCTGAGACTTATTTGAATGCCTGTTTCATATGGAGCTTTTAAGTGTAACAGTTGTGAGTGAAATTGCCCCTTTTCAAGCGCTCCGAGTTTGCTTCTGCATGGAAGGGGAAGATGGACTAGAGCTGATACCTCCTGCACCCTGGTGAAGAAATGCACCCTGAGGCCAGAAAATAGTACAAACCCATCTGGCTGCAACAGTCCAGCAGCATGAAGATCAAAGTCACGTAGTAGAGCCAGAGAGAAATTTGCCCTGGGCCTAATATTCATGAAGCCTTTCCAATTCAGACTCGGTATTATTGCCAAGTCGGTGTGTTTGGGAGAAATCAGAAGCCAACACACTAGAAAAGTTGCAAGAGATTCCTAGGGGAACCCACAAATTCAGTTCCTTGCCAGAAACCTGCTCCTCCAGATGAATCTAGTGCATCAGATGGGCTCAGAAGCACAGGTGGCGCAGGCAGACCTCTACTGAGAAGAACAACAGTGGAAGGCAGATGAAACTCACATTTTGGAGTCTGAGAGCCATGCGGGCCCACCCCAGTTACGTCTACCCCTGGTCGGTGACCAGAGAATCCTTTAGCAGCAACAGCAGTGATGTTTATTTCACTGGTATGTATAAAGCGACTGATTGAAAACAAGCTGTATGCCCAACAACTTGGAACTGGTTAAATGATTTTTGGTTCAGCCGCACAGTGGAATATCATGCGGCCATTAAGAATAAATAAAAAATCCTATACTTTCCATGTTCAACTTTAGACTGCAAACAACTGAAAAAACACCTTCATAATTAGGCTTCCTCAGATTAGAACGTGAAGTCAAATCAACGTGTGTCAGAAAGTTAACAACAGCTAACTGTTTGTTGTGGTGTTCTGAGTAACTTGTATTATTTTTCAGTTTTTTTCCCATTCCTAATGTGCAAATGTACTATTTTTATTGTAAAAAAAAATACATGTTTGTAAAGAGCAATAACATAAATCTCTGCATAGGCAAATTGAAAGGAAATCAGACAAAATGATACCTTTTGGTAGTGGAATTCTAAATCATTTTTTTCTTCATTAGAGTTTCTGAATTTTCTGCATTTGATATGTTTACCTTTATAAAGGGTCAATCATATTTAAGATGATTTTTTAAAAGACAAGTGGACAGGGAAAGAGAGGTCTGCTGTTGCAAAACCAAAGCTGGAGGCTCTCCGAAGCCCACTTATGTTAGTCAATTGATATTTCATGAAACTCTAGAATGTGCAAATCACTTTCCACGGGGATTGGGGGGGTGAGAAATACAGAGATGAAGGAGATGCAAACACTTTAATCAAAGAAATCCGTCTGGTTGGGAAGAGAAGGTTCTGCATTATATAAGTTGCAAGGTCTTATCCAAGAGGTTAGTCTGTCAAGAGTAATAGCAATAATTACACAACAATATGTCAGAGAGGCTGGGAGCTCCAGCTTCAAAGCCACCTTGCCTGGGG</dnaseq>| | sequence = <dnaseq>GAGAAACAATGCATTTTATCATAGGGCCGGACAGCTATATGCACAAGATGCTACCTGCAGAGATTGGTTTTTGCCCAGATGTGCAGGAGAGATGCACAGAGAGGAAGAAATGCATACATGTGTGCAGGTTTTGGCGTGTGCACAAGAAGCCTGGAAGGATTTTCTTTGGATCTACAGTCAAAATGGATTTCCGAGAGGAAGCTGTCTGAAAACACACCTCTTCCCTGTGCTACATACGGTCCCATCTCTGCCAGCCAGGTTGTCAGGAAAGTGATCAGCACTGGCTTCAACTCTGGCTAGAGCTCTTTGGCCAATGTGATGGGCAGAAAACTGGAATGAGGACAGAAAAGCACCTCAGAGGTTTGAAGAGTCTAGTCTCTCACCACCTTGCTGTAGGTTTTCTGAATACTTCTGAGTTTAGGAGCATTTTTTCTCAACAGGCAAGTCAGGAGCTGCTAAGATAAACCATGGCAGTAAGCTCGAGCCAGTGTTCGTATTTGCCATTGATCGGCCACCAAGTGCTTGCTATGTGCCATGCATTGTGCTAAGCACTATCTCATTTAATATTTACAGCAATCTTATGAGGTAGATGCTACTGTTATCTCCATTTTACAGATGGGGAAACTGAGGCACAGAGTTCCACAGCTGGTAACTTGAGGAATAGGAATTCAACCACTGGAGAGTCTGGCTGGAGTTTTTTGTGGTAGGAGAAAATATGCTGTCTAAATTTGCCTTGGGAAACCATCATGGTGGTCACAAAACCACTTCTACGGCTTGCCTTGACCTAGCAGGAATGAAGATGTAAAGAAAGAATGAGCGCGTCATGGTTATGATGGGATGATGATGTCTGTTGTGTTGTTTGGTGTCAGTTTCTGTAACGCCTTTCTATTTCAATCAAGGCTATTATCTTTTCCTCTGTTTTAGTGAAGTTTCCTTGAAGTAGAAAATGGGAGTGTATTGGGCATCTCAGAGTTTTCAGCTGAACTGAAGGGTCTGATGGTAACTTTACCCCCAAATCTCTGAGAGAAAAGCAGGGAGTCCCTGCTTCAGCTCTGCTCAGAAGAGCCTCCCTCACATGGTGGTTTCTGTGTCACTAGACTGGTTAACCAAATGGTTCTTCTAAATACCCAACTTTTAATAGAAACTCCTGCGGCTTGGATTATTAAAGTCCTAACATGCTTATTTAATCGTGTTTCAAGTCCATCTATCTTTTTTGAGTCTAAGGAAGACTCACTAGGTCAGAAGGAGTAGAGGGAAGAGGATTAATACATGATTTTCTTTTTCCCCTTTTTCTTTTAACTTAGGCTGAGACTTATTTGAATGCCTGTTTCATATGGAGCTTTTAAGTGTAACAGTTGTGAGTGAAATTGCCCCTTTTCAAGCGCTCCGAGTTTGCTTCTGCATGGAAGGGGAAGATGGACTAGAGCTGATACCTCCTGCACCCTGGTGAAGAAATGCACCCTGAGGCCAGAAAATAGTACAAACCCATCTGGCTGCAACAGTCCAGCAGCATGAAGATCAAAGTCACGTAGTAGAGCCAGAGAGAAATTTGCCCTGGGCCTAATATTCATGAAGCCTTTCCAATTCAGACTCGGTATTATTGCCAAGTCGGTGTGTTTGGGAGAAATCAGAAGCCAACACACTAGAAAAGTTGCAAGAGATTCCTAGGGGAACCCACAAATTCAGTTCCTTGCCAGAAACCTGCTCCTCCAGATGAATCTAGTGCATCAGATGGGCTCAGAAGCACAGGTGGCGCAGGCAGACCTCTACTGAGAAGAACAACAGTGGAAGGCAGATGAAACTCACATTTTGGAGTCTGAGAGCCATGCGGGCCCACCCCAGTTACGTCTACCCCTGGTCGGTGACCAGAGAATCCTTTAGCAGCAACAGCAGTGATGTTTATTTCACTGGTATGTATAAAGCGACTGATTGAAAACAAGCTGTATGCCCAACAACTTGGAACTGGTTAAATGATTTTTGGTTCAGCCGCACAGTGGAATATCATGCGGCCATTAAGAATAAATAAAAAATCCTATACTTTCCATGTTCAACTTTAGACTGCAAACAACTGAAAAAACACCTTCATAATTAGGCTTCCTCAGATTAGAACGTGAAGTCAAATCAACGTGTGTCAGAAAGTTAACAACAGCTAACTGTTTGTTGTGGTGTTCTGAGTAACTTGTATTATTTTTCAGTTTTTTTCCCATTCCTAATGTGCAAATGTACTATTTTTATTGTAAAAAAAAATACATGTTTGTAAAGAGCAATAACATAAATCTCTGCATAGGCAAATTGAAAGGAAATCAGACAAAATGATACCTTTTGGTAGTGGAATTCTAAATCATTTTTTTCTTCATTAGAGTTTCTGAATTTTCTGCATTTGATATGTTTACCTTTATAAAGGGTCAATCATATTTAAGATGATTTTTTAAAAGACAAGTGGACAGGGAAAGAGAGGTCTGCTGTTGCAAAACCAAAGCTGGAGGCTCTCCGAAGCCCACTTATGTTAGTCAATTGATATTTCATGAAACTCTAGAATGTGCAAATCACTTTCCACGGGGATTGGGGGGGTGAGAAATACAGAGATGAAGGAGATGCAAACACTTTAATCAAAGAAATCCGTCTGGTTGGGAAGAGAAGGTTCTGCATTATATAAGTTGCAAGGTCTTATCCAAGAGGTTAGTCTGTCAAGAGTAATAGCAATAATTACACAACAATATGTCAGAGAGGCTGGGAGCTCCAGCTTCAAAGCCACCTTGCCTGGGG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-LCP2-2]][[Category:NONHSAG042192]] | + | [[Category:Intergenic]][[Category:lnc-LCP2-2]][[Category:NONHSAG042192]][[Category:Transcripts]] |
Latest revision as of 04:35, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
lnc-LCP2-2:3 |
| Source |
LNCipedia2.1 |
| Same with |
NONHSAT105035 |
| Classification |
intergenic |
| Length |
2766 nt |
| Genomic location |
chr5-:169618123..169626137 |
| Exon number |
4 |
| Exons |
169618123..169619267,169620920..169621010,169623488..169623635,169624756..169626137 |
| Genome context |
|
| Sequence |
000001 GAGAAACAAT GCATTTTATC ATAGGGCCGG ACAGCTATAT GCACAAGATG CTACCTGCAG AGATTGGTTT TTGCCCAGAT 000080
000081 GTGCAGGAGA GATGCACAGA GAGGAAGAAA TGCATACATG TGTGCAGGTT TTGGCGTGTG CACAAGAAGC CTGGAAGGAT 000160 000161 TTTCTTTGGA TCTACAGTCA AAATGGATTT CCGAGAGGAA GCTGTCTGAA AACACACCTC TTCCCTGTGC TACATACGGT 000240 000241 CCCATCTCTG CCAGCCAGGT TGTCAGGAAA GTGATCAGCA CTGGCTTCAA CTCTGGCTAG AGCTCTTTGG CCAATGTGAT 000320 000321 GGGCAGAAAA CTGGAATGAG GACAGAAAAG CACCTCAGAG GTTTGAAGAG TCTAGTCTCT CACCACCTTG CTGTAGGTTT 000400 000401 TCTGAATACT TCTGAGTTTA GGAGCATTTT TTCTCAACAG GCAAGTCAGG AGCTGCTAAG ATAAACCATG GCAGTAAGCT 000480 000481 CGAGCCAGTG TTCGTATTTG CCATTGATCG GCCACCAAGT GCTTGCTATG TGCCATGCAT TGTGCTAAGC ACTATCTCAT 000560 000561 TTAATATTTA CAGCAATCTT ATGAGGTAGA TGCTACTGTT ATCTCCATTT TACAGATGGG GAAACTGAGG CACAGAGTTC 000640 000641 CACAGCTGGT AACTTGAGGA ATAGGAATTC AACCACTGGA GAGTCTGGCT GGAGTTTTTT GTGGTAGGAG AAAATATGCT 000720 000721 GTCTAAATTT GCCTTGGGAA ACCATCATGG TGGTCACAAA ACCACTTCTA CGGCTTGCCT TGACCTAGCA GGAATGAAGA 000800 000801 TGTAAAGAAA GAATGAGCGC GTCATGGTTA TGATGGGATG ATGATGTCTG TTGTGTTGTT TGGTGTCAGT TTCTGTAACG 000880 000881 CCTTTCTATT TCAATCAAGG CTATTATCTT TTCCTCTGTT TTAGTGAAGT TTCCTTGAAG TAGAAAATGG GAGTGTATTG 000960 000961 GGCATCTCAG AGTTTTCAGC TGAACTGAAG GGTCTGATGG TAACTTTACC CCCAAATCTC TGAGAGAAAA GCAGGGAGTC 001040 001041 CCTGCTTCAG CTCTGCTCAG AAGAGCCTCC CTCACATGGT GGTTTCTGTG TCACTAGACT GGTTAACCAA ATGGTTCTTC 001120 001121 TAAATACCCA ACTTTTAATA GAAACTCCTG CGGCTTGGAT TATTAAAGTC CTAACATGCT TATTTAATCG TGTTTCAAGT 001200 001201 CCATCTATCT TTTTTGAGTC TAAGGAAGAC TCACTAGGTC AGAAGGAGTA GAGGGAAGAG GATTAATACA TGATTTTCTT 001280 001281 TTTCCCCTTT TTCTTTTAAC TTAGGCTGAG ACTTATTTGA ATGCCTGTTT CATATGGAGC TTTTAAGTGT AACAGTTGTG 001360 001361 AGTGAAATTG CCCCTTTTCA AGCGCTCCGA GTTTGCTTCT GCATGGAAGG GGAAGATGGA CTAGAGCTGA TACCTCCTGC 001440 001441 ACCCTGGTGA AGAAATGCAC CCTGAGGCCA GAAAATAGTA CAAACCCATC TGGCTGCAAC AGTCCAGCAG CATGAAGATC 001520 001521 AAAGTCACGT AGTAGAGCCA GAGAGAAATT TGCCCTGGGC CTAATATTCA TGAAGCCTTT CCAATTCAGA CTCGGTATTA 001600 001601 TTGCCAAGTC GGTGTGTTTG GGAGAAATCA GAAGCCAACA CACTAGAAAA GTTGCAAGAG ATTCCTAGGG GAACCCACAA 001680 001681 ATTCAGTTCC TTGCCAGAAA CCTGCTCCTC CAGATGAATC TAGTGCATCA GATGGGCTCA GAAGCACAGG TGGCGCAGGC 001760 001761 AGACCTCTAC TGAGAAGAAC AACAGTGGAA GGCAGATGAA ACTCACATTT TGGAGTCTGA GAGCCATGCG GGCCCACCCC 001840 001841 AGTTACGTCT ACCCCTGGTC GGTGACCAGA GAATCCTTTA GCAGCAACAG CAGTGATGTT TATTTCACTG GTATGTATAA 001920 001921 AGCGACTGAT TGAAAACAAG CTGTATGCCC AACAACTTGG AACTGGTTAA ATGATTTTTG GTTCAGCCGC ACAGTGGAAT 002000 002001 ATCATGCGGC CATTAAGAAT AAATAAAAAA TCCTATACTT TCCATGTTCA ACTTTAGACT GCAAACAACT GAAAAAACAC 002080 002081 CTTCATAATT AGGCTTCCTC AGATTAGAAC GTGAAGTCAA ATCAACGTGT GTCAGAAAGT TAACAACAGC TAACTGTTTG 002160 002161 TTGTGGTGTT CTGAGTAACT TGTATTATTT TTCAGTTTTT TTCCCATTCC TAATGTGCAA ATGTACTATT TTTATTGTAA 002240 002241 AAAAAAATAC ATGTTTGTAA AGAGCAATAA CATAAATCTC TGCATAGGCA AATTGAAAGG AAATCAGACA AAATGATACC 002320 002321 TTTTGGTAGT GGAATTCTAA ATCATTTTTT TCTTCATTAG AGTTTCTGAA TTTTCTGCAT TTGATATGTT TACCTTTATA 002400 002401 AAGGGTCAAT CATATTTAAG ATGATTTTTT AAAAGACAAG TGGACAGGGA AAGAGAGGTC TGCTGTTGCA AAACCAAAGC 002480 002481 TGGAGGCTCT CCGAAGCCCA CTTATGTTAG TCAATTGATA TTTCATGAAA CTCTAGAATG TGCAAATCAC TTTCCACGGG 002560 002561 GATTGGGGGG GTGAGAAATA CAGAGATGAA GGAGATGCAA ACACTTTAAT CAAAGAAATC CGTCTGGTTG GGAAGAGAAG 002640 002641 GTTCTGCATT ATATAAGTTG CAAGGTCTTA TCCAAGAGGT TAGTCTGTCA AGAGTAATAG CAATAATTAC ACAACAATAT 002720 002721 GTCAGAGAGG CTGGGAGCTC CAGCTTCAAA GCCACCTTGC CTGGGG |
