Lnc-LCP2-2:4

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-LCP2-2:4
Source	LNCipedia2.1
Same with	NONHSAT105033
Classification	intergenic
Length	5610 nt
Genomic location	chr5-:169615274..169626137
Exon number	4
Exons	169615274..169619267,169620920..169621005,169623488..169623635,169624756..169626137
Genome context
Sequence	000001 GAGAAACAAT GCATTTTATC ATAGGGCCGG ACAGCTATAT GCACAAGATG CTACCTGCAG AGATTGGTTT TTGCCCAGAT 000080 000081 GTGCAGGAGA GATGCACAGA GAGGAAGAAA TGCATACATG TGTGCAGGTT TTGGCGTGTG CACAAGAAGC CTGGAAGGAT 000160 000161 TTTCTTTGGA TCTACAGTCA AAATGGATTT CCGAGAGGAA GCTGTCTGAA AACACACCTC TTCCCTGTGC TACATACGGT 000240 000241 CCCATCTCTG CCAGCCAGGT TGTCAGGAAA GTGATCAGCA CTGGCTTCAA CTCTGGCTAG AGCTCTTTGG CCAATGTGAT 000320 000321 GGGCAGAAAA CTGGAATGAG GACAGAAAAG CACCTCAGAG GTTTGAAGAG TCTAGTCTCT CACCACCTTG CTGTAGGTTT 000400 000401 TCTGAATACT TCTGAGTTTA GGAGCATTTT TTCTCAACAG GCAAGTCAGG AGCTGCTAAG ATAAACCATG GCAGTAAGCT 000480 000481 CGAGCCAGTG TTCGTATTTG CCATTGATCG GCCACCAAGT GCTTGCTATG TGCCATGCAT TGTGCTAAGC ACTATCTCAT 000560 000561 TTAATATTTA CAGCAATCTT ATGAGGTAGA TGCTACTGTT ATCTCCATTT TACAGATGGG GAAACTGAGG CACAGAGTTC 000640 000641 CACAGCTGGT AACTTGAGGA ATAGGAATTC AACCACTGGA GAGTCTGGCT GGAGTTTTTT GTGGTAGGAG AAAATATGCT 000720 000721 GTCTAAATTT GCCTTGGGAA ACCATCATGG TGGTCACAAA ACCACTTCTA CGGCTTGCCT TGACCTAGCA GGAATGAAGA 000800 000801 TGTAAAGAAA GAATGAGCGC GTCATGGTTA TGATGGGATG ATGATGTCTG TTGTGTTGTT TGGTGTCAGT TTCTGTAACG 000880 000881 CCTTTCTATT TCAATCAAGG CTATTATCTT TTCCTCTGTT TTAGTGAAGT TTCCTTGAAG TAGAAAATGG GAGTGTATTG 000960 000961 GGCATCTCAG AGTTTTCAGC TGAACTGAAG GGTCTGATGG TAACTTTACC CCCAAATCTC TGAGAGAAAA GCAGGGAGTC 001040 001041 CCTGCTTCAG CTCTGCTCAG AAGAGCCTCC CTCACATGGT GGTTTCTGTG TCACTAGACT GGTTAACCAA ATGGTTCTTC 001120 001121 TAAATACCCA ACTTTTAATA GAAACTCCTG CGGCTTGGAT TATTAAAGTC CTAACATGCT TATTTAATCG TGTTTCAAGT 001200 001201 CCATCTATCT TTTTTGAGTC TAAGGAAGAC TCACTAGGTC AGAAGGAGTA GAGGGAAGAG GATTAATACA TGATTTTCTT 001280 001281 TTTCCCCTTT TTCTTTTAAC TTAGGCTGAG ACTTATTTGA ATGCCTGTTT CATATGGAGC TTTTAAGTGT AACAGTTGTG 001360 001361 AGTGAAATTG CCCCTTTTCA AGCGCTCCGA GTTTGCTTCT GCATGGAAGG GGAAGATGGA CTAGAGCTGA TACCTCCTGC 001440 001441 ACCCTGGTGA AGAAATGCAC CCTGAGGCCA GAAAATAGTA CAAACCCATC TGGCTGCAAC AGTCCAGCAG CATGAAGATC 001520 001521 AAAGTCACGT AGCCAGAGAG AAATTTGCCC TGGGCCTAAT ATTCATGAAG CCTTTCCAAT TCAGACTCGG TATTATTGCC 001600 001601 AAGTCGGTGT GTTTGGGAGA AATCAGAAGC CAACACACTA GAAAAGTTGC AAGAGATTCC TAGGGGAACC CACAAATTCA 001680 001681 GTTCCTTGCC AGAAACCTGC TCCTCCAGAT GAATCTAGTG CATCAGATGG GCTCAGAAGC ACAGGTGGCG CAGGCAGACC 001760 001761 TCTACTGAGA AGAACAACAG TGGAAGGCAG ATGAAACTCA CATTTTGGAG TCTGAGAGCC ATGCGGGCCC ACCCCAGTTA 001840 001841 CGTCTACCCC TGGTCGGTGA CCAGAGAATC CTTTAGCAGC AACAGCAGTG ATGTTTATTT CACTGGTATG TATAAAGCGA 001920 001921 CTGATTGAAA ACAAGCTGTA TGCCCAACAA CTTGGAACTG GTTAAATGAT TTTTGGTTCA GCCGCACAGT GGAATATCAT 002000 002001 GCGGCCATTA AGAATAAATA AAAAATCCTA TACTTTCCAT GTTCAACTTT AGACTGCAAA CAACTGAAAA AACACCTTCA 002080 002081 TAATTAGGCT TCCTCAGATT AGAACGTGAA GTCAAATCAA CGTGTGTCAG AAAGTTAACA ACAGCTAACT GTTTGTTGTG 002160 002161 GTGTTCTGAG TAACTTGTAT TATTTTTCAG TTTTTTTCCC ATTCCTAATG TGCAAATGTA CTATTTTTAT TGTAAAAAAA 002240 002241 AATACATGTT TGTAAAGAGC AATAACATAA ATCTCTGCAT AGGCAAATTG AAAGGAAATC AGACAAAATG ATACCTTTTG 002320 002321 GTAGTGGAAT TCTAAATCAT TTTTTTCTTC ATTAGAGTTT CTGAATTTTC TGCATTTGAT ATGTTTACCT TTATAAAGGG 002400 002401 TCAATCATAT TTAAGATGAT TTTTTAAAAG ACAAGTGGAC AGGGAAAGAG AGGTCTGCTG TTGCAAAACC AAAGCTGGAG 002480 002481 GCTCTCCGAA GCCCACTTAT GTTAGTCAAT TGATATTTCA TGAAACTCTA GAATGTGCAA ATCACTTTCC ACGGGGATTG 002560 002561 GGGGGGTGAG AAATACAGAG ATGAAGGAGA TGCAAACACT TTAATCAAAG AAATCCGTCT GGTTGGGAAG AGAAGGTTCT 002640 002641 GCATTATATA AGTTGCAAGG TCTTATCCAA GAGGTTAGTC TGTCAAGAGT AATAGCAATA ATTACACAAC AATATGTCAG 002720 002721 AGAGGCTGGG AGCTCCAGCT TCAAAGCCAC CTTGCCTGGG GAGAAACTTA ACCATATTGG GCCTGAGCCT CAGTTACCTA 002800 002801 CCTCTTCTGT AAATGTAAAC TACCTCTTGG GGTCCTTGTG AGGATTAAAT GAAACTTGAG CCTAAAGGGG CTGAGCTAGG 002880 002881 TGCTTTGCAA ATAACCCAAC CTTAGCATGA GGCACGTTAT CATCATTACG GCTGTGGTGT TTGTGGTCAC CTATCTGCAA 002960 002961 GTCACGCTTT CATAGATATG GCTGAGCTGG GATTTGAACC CACATTGATC TAATTCCAAA GCCAATGATT CCACCCCAAC 003040 003041 CAGACACTGC ATTTACTCTC TATGCCTAAC TGAAATTTGT TCTAAACCTC ACCCTAAGGT CTTGCCAGAA AGAAAAGCTA 003120 003121 AATTTTCATT AAAAGATGAA AGGAGAAATG AATCTGTTTC AAAGGACATG AGAGGAAGAA GGAAATATCC CTTCATGAAG 003200 003201 GATTTTGCAA CTTTGTCCAT GCTTCTGCAG GGTGTAAAAG TAAAAATCCT ATACTTCCCA TATTCAACGT TAGATTTTAA 003280 003281 ACAACTGAAC AAGCACTTTC ACAATTAGCC TTCCTCAGAT TGGAATGCGA AGTCAAGCCA ACGTGTACCT CTTACTGCAG 003360 003361 AAGATTTCTG CACTGTGAAT GTGATAGGAT TTGCCTCCTT AACCAGAGGG TGCTGGTTTT TCCTGGCTGG AGGGTAGAAG 003440 003441 GTCATGAATA GAGGACAAAG CACAGGGAAG GGGCAGCATG TCGGGAAGAG CCCCAAGGAT CTCAGTATGA AAATAAAGAG 003520 003521 GTGTGAGCCA ACTGCCCATA GGTTTGGGCT ATGAGTCTGG GGAAACTGTT TCAAAATCAA TGGAGGCCCA AAGGCAGAGG 003600 003601 GAAAATTCTG TGTATGGACT TCCATGTCAT TCAGAAATGT TAACTCCTTG AAAAGAGTTA ATATATTTTT TTCTTTTTTA 003680 003681 AACATTTCAA TAGGTTTTTG GGGAACAGGT GGTGTTTGGT TCCGTGGGTA AGTTCTTTAG TGGTGATTTC TGAGATTTTG 003760 003761 GTGCACCCAT CACCTGAGCA GTGTACATTC TACCCATTGT GTAGTCTTTT ATCTTTCACT CCCCTCCCAC TTAGAATAAT 003840 003841 GTTCTCCAAT TCCATCCAGG TTGCTGCGAA GGACATTATT TCATTCCTTT TTATGGCTGA GTTGCATTCC ATGGTGTATA 003920 003921 TATATATACC ACAATGTCTG TATCCACTCA TTGATTGATG GGTATGCAGG CTGGTTCCAT ACTTTTCCAA TTGCGAATTG 004000 004001 TGCTGCTATA AACATCCATG AGCAAGTATC TTTTTGGTAT AATGATATGT TTTCCTCTGA GTGGATACCC AGTAGTGGGA 004080 004081 TTGCTGGATC AAATGGTAGT TCTACTTTTA GCTCCTTAAG TAATCTCCAC ACTGTTTTTC ATAGTGGTGG TACTAGTTTA 004160 004161 CATTTCCACC GGCAATGTAA AAGTGTTTCT TCCTGTCCCT CTGGTCATCT GTTTTTTTAA GGGATCTACC TAAACTCAAC 004240 004241 CATAACCCAT TCCATCCACC TCATCTTGCC TCAAGCTAAG AAATAGGAGT GCAGAGAAGA AAACAGTACA GATAAGAATG 004320 004321 CTAGAAGGTT GTGTGTTTGA ATAAGAAGGA ACATGGATCA GGTTTCAAGT ACAGTACCTG AGGCAGGTAT GAGGTAGTAG 004400 004401 CTAATGGGGT GAGGTAGGCA GAAAAGGCTT CTAAAGAAGC AGGTACTTGA GTTGGGTCTT CAAGGCCATA GTGAGTGGTT 004480 004481 TCCCGGTGGA TCTGAGAAAG GAAGGTGAGT TTAGAGAAAG GGAAGAGCCC GCAGTGAGGC ATGAAAATGT ACACTGTGCC 004560 004561 TTCAGCGAGC TTGGTGGGTG GCAATGTCTG GATCCAAGTG CGTGTGGAGG AGACTTTGCA CAATAAGGCC ACTAGGCAGG 004640 004641 TAGGACGGCC CCCAGAGGGT TTTGGCTGAC AAGCTGAGGG ACATGCTATA AGGGTAGGGG CCAGGGGAAG AGATGGCTCC 004720 004721 CTGGCAGTGG GTCCCCTGTG TGCTCGGCAG CTCATGGATA ACAGAGGATA ACAGGCCTGT ACCTCCATAT TGCCCAACAT 004800 004801 GTTATCACAT CTTCAGTTTG GAGAGAAGAA TTAAATTCGT CTAAGTTTAT AATTTACCAG ATGACTTTGG ATAAGCACAT 004880 004881 ATTTGGAACC TCAGATAATT CATCCATTCA TTTGCTCATT CAGAACAGTT CTTGCGCATC ACTTTATATT CAGTGCTGCT 004960 004961 GAAGTTTCTT TGGGGGCTAC ACAGGTTAGT AAGGCTTGGT TTTCATCTCA GGAACCTTAT AGCCAGAATG AGGGAGAGGT 005040 005041 GAGTACTAAC TCCACAGTGT TATCCCAGTC GCTACTCATT TCCCTTACCA CCA