Difference between revisions of "Lnc-OLFM4-4:1"

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sequence = <dnaseq>TCTTTCAGAAAGAAGAAAGCATTGTGGCTTGGTTGATGTACAGAAAGAGCTCTTACTGAATCCAGTAGCATTCCCAGTGCTGTTGAAGGTGTAAATCACTCTAAAGGCTTTGGTGTATGCAGTCCTGGATTCAAATCCTATCTCTGAAAGCTTGAAGAAGAGAGTTGACATTTCTGGAGCACACAAATCAACTCATTAAATAATGGTATCTATAAATATAACATAATCCATAATTTAATGGGCCACAAAATCCTTTATAGAATCAAATGGTTTTCTAATTGTCTGAGAATGTTTACATAAAATAGAGCTATGAAAGATGAGCCTTCTGGGTGACTGTTATTTCTTTGTTTGTTTTTCTTTAGACAAATGAATATCTTTTCTGACTTCGATAGCACACATACTAGAATTAGAAAATACCAAGGAGATCATTGTGGCCCCTGGGCATGGGTGATCTATATCATCGTTCCCCAACCCCTGGGCCATGGACCTGTACTGGCTTATGGCCTGTTGGGAACCGGGTCACACAGCTGGAGGAGGAACAAGCAGAAGTTCCATATGCCACCTTCTTCTGCTACTGCAGCAACAAGTGATATTCGAGACAGTGAAGCCCCCATCAATTCTAGACTGATATGGAGCAGAGACGACCTCCTATACACACTCCCACTACTGACCCATGGTGGACAAGAAACCAGAAATTTCATTATGTTAAGCTTCTGAGATATTTCTGTTTTTTCCACTGAACATTATTCTAATTTATGTGATATATTTGATTTTAGAGCTAACTTGTTCTAAAGCTTACAGTCTTTTGCTGGGCAGGGTAGCAGTTCCAGCCACTTAGTAGGCTGAAACAGGAGGATGGCTTAAGCTCAGGAGTTTGAGACCAGCCTGGGCTAAATAATGAGACCCCATCTCTTAAAAATATATACAAAATATATAAACAAAAATAAAGCTTACAATTTTTTTCAACAACAACCTTGTGTATAGTTCAAACGGATTTTGTACCCCATACCTTAGTAACCTACTCAATGTCATATAAGCCTTTCTACCTTTCAGAGTATCTTCTTGTCATTCCTTCTTAAAATGCTCCTCCCAAATCCTATTCTGTCTTTTTTTACTACTTTTGATCTGAACTGTCCAATATGTGACTTTGTCCATATGTGTCCACATGCAACTATTGAGCCCTTGAAATATGGCTAGTTCAAAACTGA</dnaseq>|
 
sequence = <dnaseq>TCTTTCAGAAAGAAGAAAGCATTGTGGCTTGGTTGATGTACAGAAAGAGCTCTTACTGAATCCAGTAGCATTCCCAGTGCTGTTGAAGGTGTAAATCACTCTAAAGGCTTTGGTGTATGCAGTCCTGGATTCAAATCCTATCTCTGAAAGCTTGAAGAAGAGAGTTGACATTTCTGGAGCACACAAATCAACTCATTAAATAATGGTATCTATAAATATAACATAATCCATAATTTAATGGGCCACAAAATCCTTTATAGAATCAAATGGTTTTCTAATTGTCTGAGAATGTTTACATAAAATAGAGCTATGAAAGATGAGCCTTCTGGGTGACTGTTATTTCTTTGTTTGTTTTTCTTTAGACAAATGAATATCTTTTCTGACTTCGATAGCACACATACTAGAATTAGAAAATACCAAGGAGATCATTGTGGCCCCTGGGCATGGGTGATCTATATCATCGTTCCCCAACCCCTGGGCCATGGACCTGTACTGGCTTATGGCCTGTTGGGAACCGGGTCACACAGCTGGAGGAGGAACAAGCAGAAGTTCCATATGCCACCTTCTTCTGCTACTGCAGCAACAAGTGATATTCGAGACAGTGAAGCCCCCATCAATTCTAGACTGATATGGAGCAGAGACGACCTCCTATACACACTCCCACTACTGACCCATGGTGGACAAGAAACCAGAAATTTCATTATGTTAAGCTTCTGAGATATTTCTGTTTTTTCCACTGAACATTATTCTAATTTATGTGATATATTTGATTTTAGAGCTAACTTGTTCTAAAGCTTACAGTCTTTTGCTGGGCAGGGTAGCAGTTCCAGCCACTTAGTAGGCTGAAACAGGAGGATGGCTTAAGCTCAGGAGTTTGAGACCAGCCTGGGCTAAATAATGAGACCCCATCTCTTAAAAATATATACAAAATATATAAACAAAAATAAAGCTTACAATTTTTTTCAACAACAACCTTGTGTATAGTTCAAACGGATTTTGTACCCCATACCTTAGTAACCTACTCAATGTCATATAAGCCTTTCTACCTTTCAGAGTATCTTCTTGTCATTCCTTCTTAAAATGCTCCTCCCAAATCCTATTCTGTCTTTTTTTACTACTTTTGATCTGAACTGTCCAATATGTGACTTTGTCCATATGTGTCCACATGCAACTATTGAGCCCTTGAAATATGGCTAGTTCAAAACTGA</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-OLFM4-4]]
+
[[Category:Intergenic]][[Category:lnc-OLFM4-4]][[Category:NONHSAG013598]][[Category:Transcripts]]

Latest revision as of 04:50, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-OLFM4-4:1

Source

LNCipedia2.1

Same with

NONHSAT034033

Classification

intergenic

Length

1208 nt

Genomic location

chr13+:54916093..54927951

Exon number

2

Exons

54916093..54916625,54927277..54927951

Genome context

Sequence
000001 TCTTTCAGAA AGAAGAAAGC ATTGTGGCTT GGTTGATGTA CAGAAAGAGC TCTTACTGAA TCCAGTAGCA TTCCCAGTGC 000080
000081 TGTTGAAGGT GTAAATCACT CTAAAGGCTT TGGTGTATGC AGTCCTGGAT TCAAATCCTA TCTCTGAAAG CTTGAAGAAG 000160
000161 AGAGTTGACA TTTCTGGAGC ACACAAATCA ACTCATTAAA TAATGGTATC TATAAATATA ACATAATCCA TAATTTAATG 000240
000241 GGCCACAAAA TCCTTTATAG AATCAAATGG TTTTCTAATT GTCTGAGAAT GTTTACATAA AATAGAGCTA TGAAAGATGA 000320
000321 GCCTTCTGGG TGACTGTTAT TTCTTTGTTT GTTTTTCTTT AGACAAATGA ATATCTTTTC TGACTTCGAT AGCACACATA 000400
000401 CTAGAATTAG AAAATACCAA GGAGATCATT GTGGCCCCTG GGCATGGGTG ATCTATATCA TCGTTCCCCA ACCCCTGGGC 000480
000481 CATGGACCTG TACTGGCTTA TGGCCTGTTG GGAACCGGGT CACACAGCTG GAGGAGGAAC AAGCAGAAGT TCCATATGCC 000560
000561 ACCTTCTTCT GCTACTGCAG CAACAAGTGA TATTCGAGAC AGTGAAGCCC CCATCAATTC TAGACTGATA TGGAGCAGAG 000640
000641 ACGACCTCCT ATACACACTC CCACTACTGA CCCATGGTGG ACAAGAAACC AGAAATTTCA TTATGTTAAG CTTCTGAGAT 000720
000721 ATTTCTGTTT TTTCCACTGA ACATTATTCT AATTTATGTG ATATATTTGA TTTTAGAGCT AACTTGTTCT AAAGCTTACA 000800
000801 GTCTTTTGCT GGGCAGGGTA GCAGTTCCAG CCACTTAGTA GGCTGAAACA GGAGGATGGC TTAAGCTCAG GAGTTTGAGA 000880
000881 CCAGCCTGGG CTAAATAATG AGACCCCATC TCTTAAAAAT ATATACAAAA TATATAAACA AAAATAAAGC TTACAATTTT 000960
000961 TTTCAACAAC AACCTTGTGT ATAGTTCAAA CGGATTTTGT ACCCCATACC TTAGTAACCT ACTCAATGTC ATATAAGCCT 001040
001041 TTCTACCTTT CAGAGTATCT TCTTGTCATT CCTTCTTAAA ATGCTCCTCC CAAATCCTAT TCTGTCTTTT TTTACTACTT 001120
001121 TTGATCTGAA CTGTCCAATA TGTGACTTTG TCCATATGTG TCCACATGCA ACTATTGAGC CCTTGAAATA TGGCTAGTTC 001200
001201 AAAACTGA
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