Difference between revisions of "Lnc-QSOX2-1:16"

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sequence = <dnaseq>CCCCTCTCTGCCACCTGATCCAGTGGGATTGAGACTGGATGCCCCCAAAGACAAGCCCTCGGGGAGCCCTTGCCCTCAGGGTCACTCAGGTGGTGGCAGAGGACTGGCTGGGATGTTTTTCGAGTGTGAGCTGTGGACTGAGCCTGGTGGGGTCCCTGACAGTGGGCCCTGGGGAAGAGGCCAGGAGGACCAGGATCCCCACAGGGTTCTCCACGAATGTGCTTGCAGGACGGAGGCCTGTCAGCAGGAGGTCCCCGGCATCTCCTCCACCTGGCTGGAGGCTGCCCAGGCCGCTGCCTCCCCAGCAGCTCCTGTGGTCCCTGAGGAGGCGGCGCCCCCAATCCTGCACCAGGGCAGTCCCCTTCTCCCCACCACCTCCTCCTGCGGTCCAGGCTCTGAGTCTGCTTCTGGAACCTGCTGGGGGCCTTCGGAAGAAGCCACGGTGTCATCCCACACCTCCCCAGCAGGCTCTGTGAGCAGCCTGTCCTGTCCCTCTCTCTGGGAGTTCCAGAAAGCAGCGGCTACCCTGATCCAGCTTTCTGGGAGCTCCAGCTCTCTTCCCAGCTTGGAAGCTGAAGACTCCCCAGACGAAGGTTTCAGCTGGCCTGGAGAGCTCTCTGCCCGACACTCCTCGGGGGAAGCTGGCCTGCCTTTGTCCTGGCGGTCAAACCAGGGTGAGCCTCGGCCAGGCAGTGCTCCTGGGGGTGGAGGATGGGTGACCTGGCAGAGGCCCCAGGGCCGCAGGGCCGGCCCCCTGCGTGGCTCCTCCTTGGACACGGCCATGGCAGAAGTTTCAGCGCCGGAGCAAAGCCCAAAGGCAGGCTGGCTACTGCCTTTCCCAGACATCCCCTCTCCAAGGTCAGGGTCAGAGCTGTCAGAGGCCTCCAGCAAAGTTTGGGAGGAGGACTGCGAGGAGGACCTGCCAGAACCCTGTACCGGGGCCAAGCCAGCCTCGGGGAGCTCCCTGCCTGCAGGTGGCTCACTGGGCCTTGGAAGCGGCGTGGAGCCCCAGGTGGCTCCTCCCTCCCCACGGTCCGGGGAGGGGCGGGAAGCTTCTGGGACCAGCGAGAGCCTGAAAGGGGGTGTCAGAAGCGGCATGGAGCCCCAGGTGGCTCTTCCGTCCCCATGGCCTGGGGAGGGGCTGGAAGCTTCTGGGACCAGCGAGAGCCTGATGGGGGTGTCAGACACAGGAGAAGCCCTCCAGGCACCCCCTGAGGCCGCCGGTGTGGTGTTCCCGCTGCAAATCTCTTCTGCCGGTGACTCGGACTCACTGCTGGTCTTTCCTTCGTGGACCTCTTTGAGTGAAGGGGCAGATTTCGGCAAAGGAGGAGAGACTTCTGGCTACCAGGAGGGAACCCGGGATGCTGACCCGAGCCCATCCACCAAGAGCAAACTCCCGTACCTCATGCCAGAGCCCGAGACCCCGGTGACCCTGCAGGCTCCTCCTGGGGACCCAGGCAGGCTGGCACCTCCAGTAGCTGAGAGCCGGGCGCCTGGGCCTGGTGGGAATGGGGCCCCCACTGTCCTGGAGGAAGCCTGTCCCCTACTTGCCGGTGACGTCTTGACTGAGATCCTGTCTCCCGTGGACGAGTTGCTGTCCTACGGCAGTGCCGACCTCCCGTCCTCCATCCACAGGGAGGCCCCCCTACCCCCACCTCCTCCCACTCCCCAAGCACAGAGTGATGGTGAAGACACCAACCCATGCTCGGATGCCTTCCCTTCCCCGCCCTCGGGGCCCCTTGAGGAGGACACCGCCATCACCACCCAGGATTTGTCCTCCTTGTCTGAGGAGAGTCTGCCGGAGGGACTGTTTCCTGGGCCCCAGGGGTCGGCGGGAACCCAGTAGTTGGGGCTCTGCCCAGGGGTGGCTGGTCCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCGGAGGCAGCCAGTGGCCTGAACCTGTCAGCTGGCCAGGGCACTCGTCGTGTGAGGGGTCAGGCAGTGCCCCTGGAGGGCTCCCAGGGCCATCAGTGCAGCCCCCAGCTCCATCCAGAGTGGCCTCTGTGGCCAGGGAAGGTCTGTCAGGGCTGTTGGCAGCTGGTGACGTGGAAGTGATGATCGGCGGACTGGGCTCCTGTTTTGGGCACAGGGTTCTGGGCTGATGTGGCCTTTGAGGAGGTCTTGGGCAGTCGGGGAGAGCCCTGGGAAGGAGCGCAGAGCTCTGGGCATGCAGAGAGCCGGGGTGGGTAGCGGGGCAGCTCTTAGTGGGTCTGGATGAGCTCCTGGACACTGCCTCACCTGCGGCAGGGTCCCTGGGCAGCCGAGCCTGCTTGGCCAAGACCCCCACCAGGGGCCAAGACCCCAAAGAAATGCTGGGTAAGAACAGGAAGGCAGCCACACCCCCACAGGCAGCCACACCTCCATGTCCCTGGTTGGCAGCCCCGGCAGCCTCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAGCATGCTGGTGAGGACGTTGAGGGAGGCCTGAGCTGCCAGGTAGAGGACCCACCCAGGCCCGAGGGCTCACTGGGCAGAAAGCCGCTCCTGGAGACAGACTCAGGCCGCTGTACCCATCTCCCAGGTGTGGAGAGAGACCAGGCAGTGGACTTGGTCTCCACGTGGCTCACCAGGAGGGTCCTGCGTGACTCCTTAGCAGCTCTCTCCACACAGGCCCCCAGGTGCAGCCCCTAGGGAGTGTTTTCTGGAACTACAGAGGTGCACAGGCGTCCACAATGTCATTGTGAGCTGTGTGTGGCATACACATGCACACGTGGGAGTAAGAACCTAGAGGCCTGGACTTTCCCAGGGTGGACCGGCCGGGCGGCCGGCTGTGCGGGACAGTCTCCTGGACCTTTCCCCGGTGGACCGGGTGGGCGGCCGGCTGTGCAGGATGGTCGCCTGGACCTTCCCAGGGTGGACCGGGTGGGCGGCCGGCTGTGCGGGACGGTTGCCTGGACCTTCC</dnaseq>|
 
sequence = <dnaseq>CCCCTCTCTGCCACCTGATCCAGTGGGATTGAGACTGGATGCCCCCAAAGACAAGCCCTCGGGGAGCCCTTGCCCTCAGGGTCACTCAGGTGGTGGCAGAGGACTGGCTGGGATGTTTTTCGAGTGTGAGCTGTGGACTGAGCCTGGTGGGGTCCCTGACAGTGGGCCCTGGGGAAGAGGCCAGGAGGACCAGGATCCCCACAGGGTTCTCCACGAATGTGCTTGCAGGACGGAGGCCTGTCAGCAGGAGGTCCCCGGCATCTCCTCCACCTGGCTGGAGGCTGCCCAGGCCGCTGCCTCCCCAGCAGCTCCTGTGGTCCCTGAGGAGGCGGCGCCCCCAATCCTGCACCAGGGCAGTCCCCTTCTCCCCACCACCTCCTCCTGCGGTCCAGGCTCTGAGTCTGCTTCTGGAACCTGCTGGGGGCCTTCGGAAGAAGCCACGGTGTCATCCCACACCTCCCCAGCAGGCTCTGTGAGCAGCCTGTCCTGTCCCTCTCTCTGGGAGTTCCAGAAAGCAGCGGCTACCCTGATCCAGCTTTCTGGGAGCTCCAGCTCTCTTCCCAGCTTGGAAGCTGAAGACTCCCCAGACGAAGGTTTCAGCTGGCCTGGAGAGCTCTCTGCCCGACACTCCTCGGGGGAAGCTGGCCTGCCTTTGTCCTGGCGGTCAAACCAGGGTGAGCCTCGGCCAGGCAGTGCTCCTGGGGGTGGAGGATGGGTGACCTGGCAGAGGCCCCAGGGCCGCAGGGCCGGCCCCCTGCGTGGCTCCTCCTTGGACACGGCCATGGCAGAAGTTTCAGCGCCGGAGCAAAGCCCAAAGGCAGGCTGGCTACTGCCTTTCCCAGACATCCCCTCTCCAAGGTCAGGGTCAGAGCTGTCAGAGGCCTCCAGCAAAGTTTGGGAGGAGGACTGCGAGGAGGACCTGCCAGAACCCTGTACCGGGGCCAAGCCAGCCTCGGGGAGCTCCCTGCCTGCAGGTGGCTCACTGGGCCTTGGAAGCGGCGTGGAGCCCCAGGTGGCTCCTCCCTCCCCACGGTCCGGGGAGGGGCGGGAAGCTTCTGGGACCAGCGAGAGCCTGAAAGGGGGTGTCAGAAGCGGCATGGAGCCCCAGGTGGCTCTTCCGTCCCCATGGCCTGGGGAGGGGCTGGAAGCTTCTGGGACCAGCGAGAGCCTGATGGGGGTGTCAGACACAGGAGAAGCCCTCCAGGCACCCCCTGAGGCCGCCGGTGTGGTGTTCCCGCTGCAAATCTCTTCTGCCGGTGACTCGGACTCACTGCTGGTCTTTCCTTCGTGGACCTCTTTGAGTGAAGGGGCAGATTTCGGCAAAGGAGGAGAGACTTCTGGCTACCAGGAGGGAACCCGGGATGCTGACCCGAGCCCATCCACCAAGAGCAAACTCCCGTACCTCATGCCAGAGCCCGAGACCCCGGTGACCCTGCAGGCTCCTCCTGGGGACCCAGGCAGGCTGGCACCTCCAGTAGCTGAGAGCCGGGCGCCTGGGCCTGGTGGGAATGGGGCCCCCACTGTCCTGGAGGAAGCCTGTCCCCTACTTGCCGGTGACGTCTTGACTGAGATCCTGTCTCCCGTGGACGAGTTGCTGTCCTACGGCAGTGCCGACCTCCCGTCCTCCATCCACAGGGAGGCCCCCCTACCCCCACCTCCTCCCACTCCCCAAGCACAGAGTGATGGTGAAGACACCAACCCATGCTCGGATGCCTTCCCTTCCCCGCCCTCGGGGCCCCTTGAGGAGGACACCGCCATCACCACCCAGGATTTGTCCTCCTTGTCTGAGGAGAGTCTGCCGGAGGGACTGTTTCCTGGGCCCCAGGGGTCGGCGGGAACCCAGTAGTTGGGGCTCTGCCCAGGGGTGGCTGGTCCGGGTGGAAGCGTTGACGACCAGTTGGGTAGATGCAGTTCTGCAGCAGGGGATGAGGCCGGAGGCAGCCAGTGGCCTGAACCTGTCAGCTGGCCAGGGCACTCGTCGTGTGAGGGGTCAGGCAGTGCCCCTGGAGGGCTCCCAGGGCCATCAGTGCAGCCCCCAGCTCCATCCAGAGTGGCCTCTGTGGCCAGGGAAGGTCTGTCAGGGCTGTTGGCAGCTGGTGACGTGGAAGTGATGATCGGCGGACTGGGCTCCTGTTTTGGGCACAGGGTTCTGGGCTGATGTGGCCTTTGAGGAGGTCTTGGGCAGTCGGGGAGAGCCCTGGGAAGGAGCGCAGAGCTCTGGGCATGCAGAGAGCCGGGGTGGGTAGCGGGGCAGCTCTTAGTGGGTCTGGATGAGCTCCTGGACACTGCCTCACCTGCGGCAGGGTCCCTGGGCAGCCGAGCCTGCTTGGCCAAGACCCCCACCAGGGGCCAAGACCCCAAAGAAATGCTGGGTAAGAACAGGAAGGCAGCCACACCCCCACAGGCAGCCACACCTCCATGTCCCTGGTTGGCAGCCCCGGCAGCCTCTCTCCCAGGCCAAGTGCCCTTGGCCGCCAGTGGAAAGTCTGGGTCCCTTGAGCATGCTGGTGAGGACGTTGAGGGAGGCCTGAGCTGCCAGGTAGAGGACCCACCCAGGCCCGAGGGCTCACTGGGCAGAAAGCCGCTCCTGGAGACAGACTCAGGCCGCTGTACCCATCTCCCAGGTGTGGAGAGAGACCAGGCAGTGGACTTGGTCTCCACGTGGCTCACCAGGAGGGTCCTGCGTGACTCCTTAGCAGCTCTCTCCACACAGGCCCCCAGGTGCAGCCCCTAGGGAGTGTTTTCTGGAACTACAGAGGTGCACAGGCGTCCACAATGTCATTGTGAGCTGTGTGTGGCATACACATGCACACGTGGGAGTAAGAACCTAGAGGCCTGGACTTTCCCAGGGTGGACCGGCCGGGCGGCCGGCTGTGCGGGACAGTCTCCTGGACCTTTCCCCGGTGGACCGGGTGGGCGGCCGGCTGTGCAGGATGGTCGCCTGGACCTTCCCAGGGTGGACCGGGTGGGCGGCCGGCTGTGCGGGACGGTTGCCTGGACCTTCC</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-QSOX2-1]]
+
[[Category:Intergenic]][[Category:lnc-QSOX2-1]][[Category:Transcripts]]

Latest revision as of 05:02, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-QSOX2-1:16

Source

LNCipedia2.1

Same with

,

Classification

intergenic

Length

3005 nt

Genomic location

chr9-:139144281..139147807

Exon number

2

Exons

139144281..139146980,139147503..139147807

Genome context

Sequence
000001 CCCCTCTCTG CCACCTGATC CAGTGGGATT GAGACTGGAT GCCCCCAAAG ACAAGCCCTC GGGGAGCCCT TGCCCTCAGG 000080
000081 GTCACTCAGG TGGTGGCAGA GGACTGGCTG GGATGTTTTT CGAGTGTGAG CTGTGGACTG AGCCTGGTGG GGTCCCTGAC 000160
000161 AGTGGGCCCT GGGGAAGAGG CCAGGAGGAC CAGGATCCCC ACAGGGTTCT CCACGAATGT GCTTGCAGGA CGGAGGCCTG 000240
000241 TCAGCAGGAG GTCCCCGGCA TCTCCTCCAC CTGGCTGGAG GCTGCCCAGG CCGCTGCCTC CCCAGCAGCT CCTGTGGTCC 000320
000321 CTGAGGAGGC GGCGCCCCCA ATCCTGCACC AGGGCAGTCC CCTTCTCCCC ACCACCTCCT CCTGCGGTCC AGGCTCTGAG 000400
000401 TCTGCTTCTG GAACCTGCTG GGGGCCTTCG GAAGAAGCCA CGGTGTCATC CCACACCTCC CCAGCAGGCT CTGTGAGCAG 000480
000481 CCTGTCCTGT CCCTCTCTCT GGGAGTTCCA GAAAGCAGCG GCTACCCTGA TCCAGCTTTC TGGGAGCTCC AGCTCTCTTC 000560
000561 CCAGCTTGGA AGCTGAAGAC TCCCCAGACG AAGGTTTCAG CTGGCCTGGA GAGCTCTCTG CCCGACACTC CTCGGGGGAA 000640
000641 GCTGGCCTGC CTTTGTCCTG GCGGTCAAAC CAGGGTGAGC CTCGGCCAGG CAGTGCTCCT GGGGGTGGAG GATGGGTGAC 000720
000721 CTGGCAGAGG CCCCAGGGCC GCAGGGCCGG CCCCCTGCGT GGCTCCTCCT TGGACACGGC CATGGCAGAA GTTTCAGCGC 000800
000801 CGGAGCAAAG CCCAAAGGCA GGCTGGCTAC TGCCTTTCCC AGACATCCCC TCTCCAAGGT CAGGGTCAGA GCTGTCAGAG 000880
000881 GCCTCCAGCA AAGTTTGGGA GGAGGACTGC GAGGAGGACC TGCCAGAACC CTGTACCGGG GCCAAGCCAG CCTCGGGGAG 000960
000961 CTCCCTGCCT GCAGGTGGCT CACTGGGCCT TGGAAGCGGC GTGGAGCCCC AGGTGGCTCC TCCCTCCCCA CGGTCCGGGG 001040
001041 AGGGGCGGGA AGCTTCTGGG ACCAGCGAGA GCCTGAAAGG GGGTGTCAGA AGCGGCATGG AGCCCCAGGT GGCTCTTCCG 001120
001121 TCCCCATGGC CTGGGGAGGG GCTGGAAGCT TCTGGGACCA GCGAGAGCCT GATGGGGGTG TCAGACACAG GAGAAGCCCT 001200
001201 CCAGGCACCC CCTGAGGCCG CCGGTGTGGT GTTCCCGCTG CAAATCTCTT CTGCCGGTGA CTCGGACTCA CTGCTGGTCT 001280
001281 TTCCTTCGTG GACCTCTTTG AGTGAAGGGG CAGATTTCGG CAAAGGAGGA GAGACTTCTG GCTACCAGGA GGGAACCCGG 001360
001361 GATGCTGACC CGAGCCCATC CACCAAGAGC AAACTCCCGT ACCTCATGCC AGAGCCCGAG ACCCCGGTGA CCCTGCAGGC 001440
001441 TCCTCCTGGG GACCCAGGCA GGCTGGCACC TCCAGTAGCT GAGAGCCGGG CGCCTGGGCC TGGTGGGAAT GGGGCCCCCA 001520
001521 CTGTCCTGGA GGAAGCCTGT CCCCTACTTG CCGGTGACGT CTTGACTGAG ATCCTGTCTC CCGTGGACGA GTTGCTGTCC 001600
001601 TACGGCAGTG CCGACCTCCC GTCCTCCATC CACAGGGAGG CCCCCCTACC CCCACCTCCT CCCACTCCCC AAGCACAGAG 001680
001681 TGATGGTGAA GACACCAACC CATGCTCGGA TGCCTTCCCT TCCCCGCCCT CGGGGCCCCT TGAGGAGGAC ACCGCCATCA 001760
001761 CCACCCAGGA TTTGTCCTCC TTGTCTGAGG AGAGTCTGCC GGAGGGACTG TTTCCTGGGC CCCAGGGGTC GGCGGGAACC 001840
001841 CAGTAGTTGG GGCTCTGCCC AGGGGTGGCT GGTCCGGGTG GAAGCGTTGA CGACCAGTTG GGTAGATGCA GTTCTGCAGC 001920
001921 AGGGGATGAG GCCGGAGGCA GCCAGTGGCC TGAACCTGTC AGCTGGCCAG GGCACTCGTC GTGTGAGGGG TCAGGCAGTG 002000
002001 CCCCTGGAGG GCTCCCAGGG CCATCAGTGC AGCCCCCAGC TCCATCCAGA GTGGCCTCTG TGGCCAGGGA AGGTCTGTCA 002080
002081 GGGCTGTTGG CAGCTGGTGA CGTGGAAGTG ATGATCGGCG GACTGGGCTC CTGTTTTGGG CACAGGGTTC TGGGCTGATG 002160
002161 TGGCCTTTGA GGAGGTCTTG GGCAGTCGGG GAGAGCCCTG GGAAGGAGCG CAGAGCTCTG GGCATGCAGA GAGCCGGGGT 002240
002241 GGGTAGCGGG GCAGCTCTTA GTGGGTCTGG ATGAGCTCCT GGACACTGCC TCACCTGCGG CAGGGTCCCT GGGCAGCCGA 002320
002321 GCCTGCTTGG CCAAGACCCC CACCAGGGGC CAAGACCCCA AAGAAATGCT GGGTAAGAAC AGGAAGGCAG CCACACCCCC 002400
002401 ACAGGCAGCC ACACCTCCAT GTCCCTGGTT GGCAGCCCCG GCAGCCTCTC TCCCAGGCCA AGTGCCCTTG GCCGCCAGTG 002480
002481 GAAAGTCTGG GTCCCTTGAG CATGCTGGTG AGGACGTTGA GGGAGGCCTG AGCTGCCAGG TAGAGGACCC ACCCAGGCCC 002560
002561 GAGGGCTCAC TGGGCAGAAA GCCGCTCCTG GAGACAGACT CAGGCCGCTG TACCCATCTC CCAGGTGTGG AGAGAGACCA 002640
002641 GGCAGTGGAC TTGGTCTCCA CGTGGCTCAC CAGGAGGGTC CTGCGTGACT CCTTAGCAGC TCTCTCCACA CAGGCCCCCA 002720
002721 GGTGCAGCCC CTAGGGAGTG TTTTCTGGAA CTACAGAGGT GCACAGGCGT CCACAATGTC ATTGTGAGCT GTGTGTGGCA 002800
002801 TACACATGCA CACGTGGGAG TAAGAACCTA GAGGCCTGGA CTTTCCCAGG GTGGACCGGC CGGGCGGCCG GCTGTGCGGG 002880
002881 ACAGTCTCCT GGACCTTTCC CCGGTGGACC GGGTGGGCGG CCGGCTGTGC AGGATGGTCG CCTGGACCTT CCCAGGGTGG 002960
002961 ACCGGGTGGG CGGCCGGCTG TGCGGGACGG TTGCCTGGAC CTTCC
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