Difference between revisions of "Lnc-SNURF-1:1"

Latest revision as of 05:21, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-SNURF-1:1
Source	LNCipedia2.1
Same with	,
Classification	intergenic
Length	2696 nt
Genomic location	chr15+:25224704..25266501
Exon number	11
Exons	25224704..25224789,25225094..25225231,25226922..25227584,25243513..25243633,25244117..25244225,25245392..25245521,25246505..25246860,25247872..25248035,25264174..25264295,25264975..25265016,25265737..25266501
Genome context
Sequence	000001 GGAATTATCA GAGTAACAAT AGTTCCTGTT ACTGACTTGA TATGGTCTCT GCCAGAATAG CTTCTCAGAT TAATGGCCAC 000080 000081 TCTCAGGGGA AGCATTTCTC CTTGCATTGG TTTGCTGGTA TGGATGGCCC TTAGATTTTG GCATGAGTGA TTATGCAGCC 000160 000161 TATTTGAAGA AAACCTGTTT TCAGGACCTT TTTAATTAAA TATGGCCTGT TACATGAGTT AAAGTGTCAT ACGATACCAT 000240 000241 TTTTTGACCA CTTAGTTGAT GCCTCTGAAA GGAAGAGAGA ATCAGATCGC TAAAATTTGA TGTGTCGTCA GTGTGGATCC 000320 000321 TACTCAGTAG TGTCACAACG AGGCTGAAAA TCATATTAAG TGCTTTTAGG ACAGAAACGT AAACTGCTCA GGTAAAATAA 000400 000401 CCTTATAAAG AGAAATAAGC ATATATTGCA GAGGCCTTGG CTAGGTTCAT GATGACACAG GACCTTGTCT GAACATAATG 000480 000481 ATTTCAAAAT TTGAGCTTAA AAATGACACT CTGAAATCCA GTCAGTGTGC CTCACTAGAC TTTTCGATTT CAAGATTTTC 000560 000561 TGCAGAAAAT GTTTTGAAAA CTTTGAATAC TTAAAAATGG CAGGTGTAGT ATTGCACTTT GCTAGTTGCT CAGATACCCT 000640 000641 TTTTTATTTG TATAGATATT CTGAGTTCCT TTTTTTTTCT ACATGTTGTA CGTTGTCGAA AGCTAAAAGG AAACTTATCC 000720 000721 TTGGATCACG GAAGGCAGAG GCATTTGGTG AGATGGAAAC AAGGATGTGT AAAAATGAGA CGACCACCTC TCGGATTAAA 000800 000801 AAAAAAAAGT GCCAGAGTTC TAGGGTTCTA AGTGATGTCC AGGAAGGAGG AGGAATAATA TTTATGGAGC ATATATTATG 000880 000881 GAACACACCA TTATGAATGG TTTTTGATTG ATCTCACAAA GAGCATGTGC TTTAGACATT AATGCAGCGA CTACCATGAA 000960 000961 ACAGAGTATT GGATTACCTA AGGAAAGAAG CAGAGGATGG AATTTGAGGC AATCAGGATG AGTGAAAAAT TGATTTGCAG 001040 001041 CTGACCTGCA AATGGAATCA TCAGGAACAT CCCTTTCTCA TGGAGTCCCT TAATTTACAA GTTAACTGCA AACATAGGAG 001120 001121 ATGATAGTTC CAAGAAGGAA CATTTTATCG TCTTTGTTTT TAATCTCAAG AATGGTACCT ACCATCAGTG AATGACCTGT 001200 001201 TGCAGTGCTT TCATTGAAGT GTTCTTCGTT CCCTCAGCAA TATGATTGTG ATGACTGAAA AAGGGAAACT GTGCCACTAT 001280 001281 TTGTACCATC ATTTTCACCA AAATCTAAAA ATGCTTTTTA TGACGTATGG AGACATTCTT CATGTTTGTT TCAGTGGACA 001360 001361 CTCCTTGCAG ATGTAAAAAA CTGAGAAAAC TCACTTTTGG AAAGTGACCT AAAGAGTGTC ATTGAAGTGA ATTTTAAGTA 001440 001441 GGCACGATGA TTGTTTTCAT GGTTGCTGTT GGATCATATC TCAGGAGCTG GAATGACAGA CATTATTGAA CAAAGAAATC 001520 001521 AGGATAGTGG AACTTAAAGG GCTTCATCTC AGTGCTTTCA TAAGTATGAA GTGCATATAT TTATAATTTT CACTAATCAC 001600 001601 AGGAATATTC CCTCTGTATA CTTGCATTTT TTTCTATCAA TTGACGCTTA CAATTATTTT TGCAAGTTGG AAAAAAATGC 001680 001681 AGTATTAATT TCATTTGCAA CAAATTTAAT AGATTAATTA GGAGAGAATA GATATCTTTA AAATTGAGTC TTCTGTCCAA 001760 001761 CTGCAAGTTA TAGCTGAGGT GGTACCAGTT TAAGAAGTGA GAACTTCTTC ACTGACTGAA ATTTGCATAT CAATCCAAAT 001840 001841 CATTGTGCTT ATTTACTATT TTTGTAGACG TCATTCTTCA AAAGTGCTGC ATCTTCAATA GTCAAGGAGG ACAAAGACAT 001920 001921 CTTTCCTGCA GGTGGTGACC ATGTGGATAA TAGGATCATA GACAAATGGT GGT<

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>GGAATTATCAGAGTAACAATAGTTCCTGTTACTGACTTGATATGGTCTCTGCCAGAATAGCTTCTCAGATTAATGGCCACTCTCAGGGGAAGCATTTCTCCTTGCATTGGTTTGCTGGTATGGATGGCCCTTAGATTTTGGCATGAGTGATTATGCAGCCTATTTGAAGAAAACCTGTTTTCAGGACCTTTTTAATTAAATATGGCCTGTTACATGAGTTAAAGTGTCATACGATACCATTTTTTGACCACTTAGTTGATGCCTCTGAAAGGAAGAGAGAATCAGATCGCTAAAATTTGATGTGTCGTCAGTGTGGATCCTACTCAGTAGTGTCACAACGAGGCTGAAAATCATATTAAGTGCTTTTAGGACAGAAACGTAAACTGCTCAGGTAAAATAACCTTATAAAGAGAAATAAGCATATATTGCAGAGGCCTTGGCTAGGTTCATGATGACACAGGACCTTGTCTGAACATAATGATTTCAAAATTTGAGCTTAAAAATGACACTCTGAAATCCAGTCAGTGTGCCTCACTAGACTTTTCGATTTCAAGATTTTCTGCAGAAAATGTTTTGAAAACTTTGAATACTTAAAAATGGCAGGTGTAGTATTGCACTTTGCTAGTTGCTCAGATACCCTTTTTTATTTGTATAGATATTCTGAGTTCCTTTTTTTTTCTACATGTTGTACGTTGTCGAAAGCTAAAAGGAAACTTATCCTTGGATCACGGAAGGCAGAGGCATTTGGTGAGATGGAAACAAGGATGTGTAAAAATGAGACGACCACCTCTCGGATTAAAAAAAAAAAGTGCCAGAGTTCTAGGGTTCTAAGTGATGTCCAGGAAGGAGGAGGAATAATATTTATGGAGCATATATTATGGAACACACCATTATGAATGGTTTTTGATTGATCTCACAAAGAGCATGTGCTTTAGACATTAATGCAGCGACTACCATGAAACAGAGTATTGGATTACCTAAGGAAAGAAGCAGAGGATGGAATTTGAGGCAATCAGGATGAGTGAAAAATTGATTTGCAGCTGACCTGCAAATGGAATCATCAGGAACATCCCTTTCTCATGGAGTCCCTTAATTTACAAGTTAACTGCAAACATAGGAGATGATAGTTCCAAGAAGGAACATTTTATCGTCTTTGTTTTTAATCTCAAGAATGGTACCTACCATCAGTGAATGACCTGTTGCAGTGCTTTCATTGAAGTGTTCTTCGTTCCCTCAGCAATATGATTGTGATGACTGAAAAAGGGAAACTGTGCCACTATTTGTACCATCATTTTCACCAAAATCTAAAAATGCTTTTTATGACGTATGGAGACATTCTTCATGTTTGTTTCAGTGGACACTCCTTGCAGATGTAAAAAACTGAGAAAACTCACTTTTGGAAAGTGACCTAAAGAGTGTCATTGAAGTGAATTTTAAGTAGGCACGATGATTGTTTTCATGGTTGCTGTTGGATCATATCTCAGGAGCTGGAATGACAGACATTATTGAACAAAGAAATCAGGATAGTGGAACTTAAAGGGCTTCATCTCAGTGCTTTCATAAGTATGAAGTGCATATATTTATAATTTTCACTAATCACAGGAATATTCCCTCTGTATACTTGCATTTTTTTCTATCAATTGACGCTTACAATTATTTTTGCAAGTTGGAAAAAAATGCAGTATTAATTTCATTTGCAACAAATTTAATAGATTAATTAGGAGAGAATAGATATCTTTAAAATTGAGTCTTCTGTCCAACTGCAAGTTATAGCTGAGGTGGTACCAGTTTAAGAAGTGAGAACTTCTTCACTGACTGAAATTTGCATATCAATCCAAATCATTGTGCTTATTTACTATTTTTGTAGACGTCATTCTTCAAAAGTGCTGCATCTTCAATAGTCAAGGAGGACAAAGACATCTTTCCTGCAGGTGGTGACCATGTGGATAATAGGATCATAGACAAATGGTGGTTCCATCTACAGCATCACCGAAATGCTGTTGTTACTGCTTCTTTCTGGGATCTTCTTGCATCTTTGCTTCTAAAGGGGCACACCTTTTATAGAAGTACGTCCAGGAATAGAAGTGACCTGCTTTTTCGCAAGTAATTGCCTGGAATGTTTTTATGTACTTCTCTGCACTCTCAATACATTTCATGCTTCCCTCTATTTTTGTATATTAACTCATTGTATTTCTTAAATTTATATTTTACTTTATGAATGGAAGTGAGATTTGTGTATGGTAAATATAATTAATTCAACCCCATGGATACGTTAGTCACTGTCCAGATGATGGCAAGTCTTTCTCAGAAGCAGAGGGCCTTGGTGTGCCAGTGATTTTTTTTCCCCATGTGTAAGATACTTTTTTTCCTCATTTGAATCAGGAGCCCACAGTTTTTAGACAAGTCCCAAATGAAATCTTAAGCATTTGTGTTATCTGGACTAGACCTTCTGTAGTATCCTTTTTGTTAGACCTAGTATATCTCATTGCAGATCAGGATCTGAGATTGACTATAGTTCACCTCTTTCCAAGTACACAAACTTGGATGACATGACAACTGAGTGTGTAAGGGAGAGCGAGACCCTTGCACTGCCATTTGAGCCCTTGTGATCTCATCTTGTAGAACATGTTGTACAATCATTTTATTGGTATCATTAGTGTTATTTGGGGCTGGAATAAAAATCTCAGTGCACCAAA</dnaseq>|
 }}
-[[Category:Intergenic]][[Category:lnc-SNURF-1]]
+[[Category:Intergenic]][[Category:lnc-SNURF-1]][[Category:Transcripts]]